RNA–Protein interactions for RNA: ENST00000559880.5

SLTM-220, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-220ENST00000559880 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
SLTM-220ENST00000559880 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
SLTM-220ENST00000559880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
SLTM-220ENST00000559880 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
SLTM-220ENST00000559880 KDM6BO15054 1643 aa16.94■□□□□ 0.3
SLTM-220ENST00000559880 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
SLTM-220ENST00000559880 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
SLTM-220ENST00000559880 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
SLTM-220ENST00000559880 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
SLTM-220ENST00000559880 KIF14Q15058 1648 aa16.92■□□□□ 0.3
SLTM-220ENST00000559880 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
SLTM-220ENST00000559880 APLP2Q06481 763 aa16.9■□□□□ 0.3
SLTM-220ENST00000559880 CAPN15O75808 1086 aa16.88■□□□□ 0.29
SLTM-220ENST00000559880 PLCH2O75038 1416 aa16.82■□□□□ 0.28
SLTM-220ENST00000559880 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
SLTM-220ENST00000559880 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
SLTM-220ENST00000559880 FANCAO15360 1455 aa16.81■□□□□ 0.28
SLTM-220ENST00000559880 NEO1Q92859 1461 aa16.81■□□□□ 0.28
SLTM-220ENST00000559880 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
SLTM-220ENST00000559880 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
SLTM-220ENST00000559880 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
SLTM-220ENST00000559880 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
SLTM-220ENST00000559880 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
SLTM-220ENST00000559880 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
SLTM-220ENST00000559880 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
SLTM-220ENST00000559880 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.28
SLTM-220ENST00000559880 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.28
SLTM-220ENST00000559880 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
SLTM-220ENST00000559880 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
SLTM-220ENST00000559880 CFAP74Q9C0B2 1584 aa16.76■□□□□ 0.27
SLTM-220ENST00000559880 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
SLTM-220ENST00000559880 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
SLTM-220ENST00000559880 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
SLTM-220ENST00000559880 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
SLTM-220ENST00000559880 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
SLTM-220ENST00000559880 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
SLTM-220ENST00000559880 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
SLTM-220ENST00000559880 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
SLTM-220ENST00000559880 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
SLTM-220ENST00000559880 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
SLTM-220ENST00000559880 SCAPERQ9BY12 1400 aa16.72■□□□□ 0.27
SLTM-220ENST00000559880 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
SLTM-220ENST00000559880 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
SLTM-220ENST00000559880 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
SLTM-220ENST00000559880 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
SLTM-220ENST00000559880 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
SLTM-220ENST00000559880 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
SLTM-220ENST00000559880 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
SLTM-220ENST00000559880 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
SLTM-220ENST00000559880 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
SLTM-220ENST00000559880 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
SLTM-220ENST00000559880 ABCC1P33527 1531 aa16.65■□□□□ 0.26
SLTM-220ENST00000559880 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
SLTM-220ENST00000559880 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
SLTM-220ENST00000559880 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
SLTM-220ENST00000559880 TRAPPC8Q9Y2L5 1435 aa16.63■□□□□ 0.25
SLTM-220ENST00000559880 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
SLTM-220ENST00000559880 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
SLTM-220ENST00000559880 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
SLTM-220ENST00000559880 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
SLTM-220ENST00000559880 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.256e-9■■■■■ 29.9
SLTM-220ENST00000559880 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SLTM-220ENST00000559880 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
SLTM-220ENST00000559880 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
SLTM-220ENST00000559880 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
SLTM-220ENST00000559880 KDM5CP41229 1560 aa16.59■□□□□ 0.25
SLTM-220ENST00000559880 DSG3P32926 999 aa16.57■□□□□ 0.24
SLTM-220ENST00000559880 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
SLTM-220ENST00000559880 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
SLTM-220ENST00000559880 CAMSAP2Q08AD1 1489 aa16.55■□□□□ 0.24
SLTM-220ENST00000559880 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
SLTM-220ENST00000559880 PLEKHH2Q8IVE3 1493 aa16.55■□□□□ 0.24
SLTM-220ENST00000559880 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
SLTM-220ENST00000559880 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
SLTM-220ENST00000559880 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
SLTM-220ENST00000559880 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
SLTM-220ENST00000559880 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
SLTM-220ENST00000559880 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.24
SLTM-220ENST00000559880 KIDINS220Q9ULH0 1771 aa16.52■□□□□ 0.24
SLTM-220ENST00000559880 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
SLTM-220ENST00000559880 ABCA6Q8N139 1617 aa16.52■□□□□ 0.23
SLTM-220ENST00000559880 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
SLTM-220ENST00000559880 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
SLTM-220ENST00000559880 ATP10AO60312 1499 aa16.5■□□□□ 0.23
SLTM-220ENST00000559880 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
SLTM-220ENST00000559880 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
SLTM-220ENST00000559880 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
SLTM-220ENST00000559880 ZBTB22O15209 634 aa16.47■□□□□ 0.23
SLTM-220ENST00000559880 ABCB7O75027 752 aa16.47■□□□□ 0.23
SLTM-220ENST00000559880 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
SLTM-220ENST00000559880 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
SLTM-220ENST00000559880 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
SLTM-220ENST00000559880 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
SLTM-220ENST00000559880 BCORL1Q5H9F3 1711 aa16.46■□□□□ 0.23
SLTM-220ENST00000559880 MLECQ14165 292 aa16.46■□□□□ 0.23
SLTM-220ENST00000559880 ADAMTSL3P82987 1691 aa16.44■□□□□ 0.22
SLTM-220ENST00000559880 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
SLTM-220ENST00000559880 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
SLTM-220ENST00000559880 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
SLTM-220ENST00000559880 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms