RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
SPG11-219ENST00000559822 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
SPG11-219ENST00000559822 PCF11O94913 1555 aaKnown RBP19.95■□□□□ 0.78
SPG11-219ENST00000559822 POGZQ7Z3K3 1410 aa19.94■□□□□ 0.78
SPG11-219ENST00000559822 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
SPG11-219ENST00000559822 PTPRMP28827 1452 aa19.93■□□□□ 0.78
SPG11-219ENST00000559822 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
SPG11-219ENST00000559822 FYCO1Q9BQS8 1478 aa19.91■□□□□ 0.78
SPG11-219ENST00000559822 MADDQ8WXG6 1647 aa19.9■□□□□ 0.78
SPG11-219ENST00000559822 YEATS2Q9ULM3 1422 aa19.89■□□□□ 0.77
SPG11-219ENST00000559822 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
SPG11-219ENST00000559822 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SPG11-219ENST00000559822 ATP10AO60312 1499 aa19.83■□□□□ 0.76
SPG11-219ENST00000559822 RIMS1Q86UR5 1692 aaKnown RBP19.83■□□□□ 0.76
SPG11-219ENST00000559822 C9orf84Q5VXU9 1444 aa19.83■□□□□ 0.76
SPG11-219ENST00000559822 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
SPG11-219ENST00000559822 KDM5CP41229 1560 aa19.82■□□□□ 0.76
SPG11-219ENST00000559822 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
SPG11-219ENST00000559822 ABCC1P33527 1531 aa19.77■□□□□ 0.76
SPG11-219ENST00000559822 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
SPG11-219ENST00000559822 MYT1LQ9UL68 1186 aa19.77■□□□□ 0.76
SPG11-219ENST00000559822 FER1L4A9Z1Z3 1794 aa19.76■□□□□ 0.75
SPG11-219ENST00000559822 MLECQ14165 292 aa19.76■□□□□ 0.75
SPG11-219ENST00000559822 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
SPG11-219ENST00000559822 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
SPG11-219ENST00000559822 MLH3Q9UHC1 1453 aa19.74■□□□□ 0.75
SPG11-219ENST00000559822 ARHGEF12Q9NZN5 1544 aa19.74■□□□□ 0.75
SPG11-219ENST00000559822 REREQ9P2R6 1566 aa19.74■□□□□ 0.75
SPG11-219ENST00000559822 DIP2CQ9Y2E4 1556 aa19.72■□□□□ 0.75
SPG11-219ENST00000559822 LMTK3Q96Q04 1460 aa19.72■□□□□ 0.75
SPG11-219ENST00000559822 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
SPG11-219ENST00000559822 TRAPPC8Q9Y2L5 1435 aa19.7■□□□□ 0.74
SPG11-219ENST00000559822 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
SPG11-219ENST00000559822 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
SPG11-219ENST00000559822 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
SPG11-219ENST00000559822 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
SPG11-219ENST00000559822 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
SPG11-219ENST00000559822 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
SPG11-219ENST00000559822 ILDR1Q86SU0 546 aaPredicted RBP19.67■□□□□ 0.74
SPG11-219ENST00000559822 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
SPG11-219ENST00000559822 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
SPG11-219ENST00000559822 AGLP35573 1532 aa19.66■□□□□ 0.74
SPG11-219ENST00000559822 CFDP1Q9UEE9 299 aaPredicted RBP19.65■□□□□ 0.74
SPG11-219ENST00000559822 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
SPG11-219ENST00000559822 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
SPG11-219ENST00000559822 KIAA1107Q9UPP5 1409 aa19.64■□□□□ 0.73
SPG11-219ENST00000559822 KIDINS220Q9ULH0 1771 aa19.64■□□□□ 0.73
SPG11-219ENST00000559822 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
SPG11-219ENST00000559822 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
SPG11-219ENST00000559822 PREX1Q8TCU6 1659 aa19.6■□□□□ 0.73
SPG11-219ENST00000559822 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.72
SPG11-219ENST00000559822 HSPA2P54652 639 aa19.58■□□□□ 0.72
SPG11-219ENST00000559822 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
SPG11-219ENST00000559822 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
SPG11-219ENST00000559822 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
SPG11-219ENST00000559822 CEBPAP49715 358 aaPredicted RBP19.55■□□□□ 0.72
SPG11-219ENST00000559822 INO80Q9ULG1 1556 aaPredicted RBP19.55■□□□□ 0.72
SPG11-219ENST00000559822 UHRF1BP1Q6BDS2 1440 aa19.54■□□□□ 0.72
SPG11-219ENST00000559822 SETD1BQ9UPS6 1966 aaKnown RBP19.53■□□□□ 0.72
SPG11-219ENST00000559822 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
SPG11-219ENST00000559822 C3P01024 1663 aa19.52■□□□□ 0.71
SPG11-219ENST00000559822 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
SPG11-219ENST00000559822 A2MP01023 1474 aa19.5■□□□□ 0.71
SPG11-219ENST00000559822 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
SPG11-219ENST00000559822 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
SPG11-219ENST00000559822 FBXO41Q8TF61 875 aa19.49■□□□□ 0.71
SPG11-219ENST00000559822 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
SPG11-219ENST00000559822 ADGBQ8N7X0 1667 aa19.48■□□□□ 0.71
SPG11-219ENST00000559822 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
SPG11-219ENST00000559822 RTEL1-TNFRSF6BF6WH68 1400 aa19.47■□□□□ 0.71
SPG11-219ENST00000559822 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
SPG11-219ENST00000559822 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
SPG11-219ENST00000559822 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
SPG11-219ENST00000559822 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
SPG11-219ENST00000559822 CCDC141Q6ZP82 1450 aa19.44■□□□□ 0.7
SPG11-219ENST00000559822 NPATQ14207 1427 aa19.43■□□□□ 0.7
SPG11-219ENST00000559822 CAMSAP2Q08AD1 1489 aa19.43■□□□□ 0.7
SPG11-219ENST00000559822 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
SPG11-219ENST00000559822 LRRC9Q6ZRR7 1453 aa19.42■□□□□ 0.7
SPG11-219ENST00000559822 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
SPG11-219ENST00000559822 ZMYM3Q14202 1370 aa19.42■□□□□ 0.7
SPG11-219ENST00000559822 GGT6Q6P531 493 aa19.4■□□□□ 0.7
SPG11-219ENST00000559822 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
SPG11-219ENST00000559822 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
SPG11-219ENST00000559822 ARHGEF5Q12774 1597 aa19.38■□□□□ 0.69
SPG11-219ENST00000559822 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
SPG11-219ENST00000559822 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
SPG11-219ENST00000559822 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
SPG11-219ENST00000559822 PTPRTO14522 1441 aa19.34■□□□□ 0.69
SPG11-219ENST00000559822 CERKQ8TCT0 537 aa19.34■□□□□ 0.69
SPG11-219ENST00000559822 FAM135AQ9P2D6 1515 aa19.34■□□□□ 0.69
SPG11-219ENST00000559822 APLP2Q06481 763 aa19.32■□□□□ 0.68
SPG11-219ENST00000559822 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
SPG11-219ENST00000559822 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
SPG11-219ENST00000559822 MIA2Q96PC5 1412 aa19.32■□□□□ 0.68
SPG11-219ENST00000559822 KIF3BO15066 747 aa19.31■□□□□ 0.68
SPG11-219ENST00000559822 MYOM3Q5VTT5 1437 aa19.31■□□□□ 0.68
SPG11-219ENST00000559822 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
SPG11-219ENST00000559822 MYO3AQ8NEV4 1616 aa19.3■□□□□ 0.68
SPG11-219ENST00000559822 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms