RNA–Protein interactions for RNA: ENST00000559522.1

PIF1-206, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-206ENST00000559522 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.28
PIF1-206ENST00000559522 HECW1Q76N89 1606 aa23.07■■□□□ 1.28
PIF1-206ENST00000559522 ARHGEF40Q8TER5 1519 aa23.06■■□□□ 1.28
PIF1-206ENST00000559522 CLIP1P30622 1438 aa23.06■■□□□ 1.28
PIF1-206ENST00000559522 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
PIF1-206ENST00000559522 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
PIF1-206ENST00000559522 MAGI2Q86UL8 1455 aa23.04■■□□□ 1.28
PIF1-206ENST00000559522 CEBPAP49715 358 aaPredicted RBP23.01■■□□□ 1.27
PIF1-206ENST00000559522 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
PIF1-206ENST00000559522 ATP10AO60312 1499 aa23■■□□□ 1.27
PIF1-206ENST00000559522 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
PIF1-206ENST00000559522 FBXO41Q8TF61 875 aa23■■□□□ 1.27
PIF1-206ENST00000559522 ZMYM4Q5VZL5 1548 aa22.99■■□□□ 1.27
PIF1-206ENST00000559522 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
PIF1-206ENST00000559522 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
PIF1-206ENST00000559522 LMTK3Q96Q04 1460 aa22.96■■□□□ 1.27
PIF1-206ENST00000559522 KIF14Q15058 1648 aa22.96■■□□□ 1.27
PIF1-206ENST00000559522 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
PIF1-206ENST00000559522 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
PIF1-206ENST00000559522 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
PIF1-206ENST00000559522 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
PIF1-206ENST00000559522 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
PIF1-206ENST00000559522 SIGLEC1Q9BZZ2 1709 aa22.88■■□□□ 1.25
PIF1-206ENST00000559522 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
PIF1-206ENST00000559522 TRAPPC8Q9Y2L5 1435 aa22.86■■□□□ 1.25
PIF1-206ENST00000559522 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
PIF1-206ENST00000559522 CFDP1Q9UEE9 299 aaPredicted RBP22.81■■□□□ 1.24
PIF1-206ENST00000559522 ARHGEF12Q9NZN5 1544 aa22.81■■□□□ 1.24
PIF1-206ENST00000559522 LRRIQ1Q96JM4 1722 aa22.8■■□□□ 1.24
PIF1-206ENST00000559522 FER1L4A9Z1Z3 1794 aa22.8■■□□□ 1.24
PIF1-206ENST00000559522 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
PIF1-206ENST00000559522 SPAG9O60271 1321 aaKnown RBP22.78■■□□□ 1.24
PIF1-206ENST00000559522 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
PIF1-206ENST00000559522 MLH3Q9UHC1 1453 aa22.77■■□□□ 1.24
PIF1-206ENST00000559522 KDM5CP41229 1560 aa22.76■■□□□ 1.23
PIF1-206ENST00000559522 CDC42BPBQ9Y5S2 1711 aa22.76■■□□□ 1.23
PIF1-206ENST00000559522 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
PIF1-206ENST00000559522 DMRT2Q9Y5R5 561 aa22.75■■□□□ 1.23
PIF1-206ENST00000559522 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
PIF1-206ENST00000559522 DIP2CQ9Y2E4 1556 aa22.73■■□□□ 1.23
PIF1-206ENST00000559522 UHRF1BP1Q6BDS2 1440 aa22.73■■□□□ 1.23
PIF1-206ENST00000559522 ABCC1P33527 1531 aa22.72■■□□□ 1.23
PIF1-206ENST00000559522 GPATCH8Q9UKJ3 1502 aaKnown RBP22.71■■□□□ 1.23
PIF1-206ENST00000559522 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
PIF1-206ENST00000559522 GGT6Q6P531 493 aa22.69■■□□□ 1.22
PIF1-206ENST00000559522 ABCA6Q8N139 1617 aa22.68■■□□□ 1.22
PIF1-206ENST00000559522 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
PIF1-206ENST00000559522 AGLP35573 1532 aa22.64■■□□□ 1.21
PIF1-206ENST00000559522 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
PIF1-206ENST00000559522 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
PIF1-206ENST00000559522 CDC42BPAQ5VT25 1732 aa22.63■■□□□ 1.21
PIF1-206ENST00000559522 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
PIF1-206ENST00000559522 REREQ9P2R6 1566 aa22.62■■□□□ 1.21
PIF1-206ENST00000559522 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
PIF1-206ENST00000559522 CNTLNQ9NXG0 1405 aa22.61■■□□□ 1.21
PIF1-206ENST00000559522 PREX1Q8TCU6 1659 aa22.61■■□□□ 1.21
PIF1-206ENST00000559522 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
PIF1-206ENST00000559522 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
PIF1-206ENST00000559522 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
PIF1-206ENST00000559522 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
PIF1-206ENST00000559522 SETD1BQ9UPS6 1966 aaKnown RBP22.56■■□□□ 1.2
PIF1-206ENST00000559522 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
PIF1-206ENST00000559522 A2MP01023 1474 aa22.55■■□□□ 1.2
PIF1-206ENST00000559522 NCKAP5LQ9HCH0 1330 aa22.55■■□□□ 1.2
PIF1-206ENST00000559522 C3P01024 1663 aa22.54■■□□□ 1.2
PIF1-206ENST00000559522 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
PIF1-206ENST00000559522 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.2
PIF1-206ENST00000559522 KIF3BO15066 747 aa22.51■■□□□ 1.19
PIF1-206ENST00000559522 PTPRTO14522 1441 aa22.49■■□□□ 1.19
PIF1-206ENST00000559522 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
PIF1-206ENST00000559522 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
PIF1-206ENST00000559522 NPATQ14207 1427 aa22.47■■□□□ 1.19
PIF1-206ENST00000559522 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
PIF1-206ENST00000559522 TSPY10P0CW01 314 aa22.46■■□□□ 1.19
PIF1-206ENST00000559522 EHBP1L1Q8N3D4 1523 aa22.46■■□□□ 1.19
PIF1-206ENST00000559522 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.18
PIF1-206ENST00000559522 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
PIF1-206ENST00000559522 DHX29Q7Z478 1369 aaKnown RBP22.44■■□□□ 1.18
PIF1-206ENST00000559522 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
PIF1-206ENST00000559522 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
PIF1-206ENST00000559522 FBXO31Q5XUX0 539 aaPredicted RBP22.43■■□□□ 1.18
PIF1-206ENST00000559522 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
PIF1-206ENST00000559522 PKD2Q13563 968 aa22.41■■□□□ 1.18
PIF1-206ENST00000559522 CAMSAP1Q5T5Y3 1602 aa22.41■■□□□ 1.18
PIF1-206ENST00000559522 INO80Q9ULG1 1556 aaPredicted RBP22.41■■□□□ 1.18
PIF1-206ENST00000559522 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
PIF1-206ENST00000559522 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
PIF1-206ENST00000559522 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
PIF1-206ENST00000559522 CLTCQ00610 1675 aaKnown RBP22.39■■□□□ 1.18
PIF1-206ENST00000559522 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
PIF1-206ENST00000559522 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
PIF1-206ENST00000559522 PLXNC1O60486 1568 aa22.36■■□□□ 1.17
PIF1-206ENST00000559522 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
PIF1-206ENST00000559522 MROH2AA6NES4 1674 aa22.35■■□□□ 1.17
PIF1-206ENST00000559522 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
PIF1-206ENST00000559522 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
PIF1-206ENST00000559522 UBAP1LF5GYI3 381 aa22.33■■□□□ 1.17
PIF1-206ENST00000559522 ADGBQ8N7X0 1667 aa22.32■■□□□ 1.16
PIF1-206ENST00000559522 TNRQ92752 1358 aa22.31■■□□□ 1.16
PIF1-206ENST00000559522 APLP2Q06481 763 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms