RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 WDR70Q9NW82 654 aa8.33□□□□□ -1.08
CTDSPL2-206ENST00000559175 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
CTDSPL2-206ENST00000559175 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
CTDSPL2-206ENST00000559175 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
CTDSPL2-206ENST00000559175 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-206ENST00000559175 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
CTDSPL2-206ENST00000559175 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
CTDSPL2-206ENST00000559175 IFT140Q96RY7 1462 aa8.31□□□□□ -1.08
CTDSPL2-206ENST00000559175 CHD1O14646 1710 aa8.31□□□□□ -1.08
CTDSPL2-206ENST00000559175 ADAMTS12P58397 1594 aa8.3□□□□□ -1.08
CTDSPL2-206ENST00000559175 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
CTDSPL2-206ENST00000559175 BCCIPQ9P287 314 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTDSPL2-206ENST00000559175 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.3□□□□□ -1.08
CTDSPL2-206ENST00000559175 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
CTDSPL2-206ENST00000559175 CEP164Q9UPV0 1460 aa8.28□□□□□ -1.08
CTDSPL2-206ENST00000559175 PSMD1Q99460 953 aa8.28□□□□□ -1.08
CTDSPL2-206ENST00000559175 CUX1P39880 1505 aa8.27□□□□□ -1.08
CTDSPL2-206ENST00000559175 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL2-206ENST00000559175 KIF21BO75037 1637 aa8.27□□□□□ -1.09
CTDSPL2-206ENST00000559175 FGD1P98174 961 aa8.27□□□□□ -1.09
CTDSPL2-206ENST00000559175 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
CTDSPL2-206ENST00000559175 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
CTDSPL2-206ENST00000559175 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
CTDSPL2-206ENST00000559175 SPOCK2Q92563 424 aa8.26□□□□□ -1.09
CTDSPL2-206ENST00000559175 ZNF316A6NFI3 1004 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-206ENST00000559175 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-206ENST00000559175 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
CTDSPL2-206ENST00000559175 CLUAP1Q96AJ1 413 aa8.25□□□□□ -1.09
CTDSPL2-206ENST00000559175 KDM4AO75164 1064 aa8.24□□□□□ -1.09
CTDSPL2-206ENST00000559175 TICAM2Q86XR7 235 aa8.23□□□□□ -1.09
CTDSPL2-206ENST00000559175 MAGI1Q96QZ7 1491 aaPredicted RBP8.23□□□□□ -1.09
CTDSPL2-206ENST00000559175 RUSC2Q8N2Y8 1516 aa8.22□□□□□ -1.09
CTDSPL2-206ENST00000559175 CTTNBP2Q8WZ74 1663 aa8.22□□□□□ -1.09
CTDSPL2-206ENST00000559175 SYNJ1O43426 1573 aa8.2□□□□□ -1.1
CTDSPL2-206ENST00000559175 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
CTDSPL2-206ENST00000559175 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-206ENST00000559175 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
CTDSPL2-206ENST00000559175 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
CTDSPL2-206ENST00000559175 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
CTDSPL2-206ENST00000559175 IRF5Q13568 498 aa8.17□□□□□ -1.1
CTDSPL2-206ENST00000559175 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-206ENST00000559175 GTPBP6O43824 516 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-206ENST00000559175 NAP1L5Q96NT1 182 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-206ENST00000559175 CLSTN1O94985 981 aa8.16□□□□□ -1.1
CTDSPL2-206ENST00000559175 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
CTDSPL2-206ENST00000559175 PRDM16Q9HAZ2 1276 aa8.16□□□□□ -1.1
CTDSPL2-206ENST00000559175 P3H3Q8IVL6 736 aa8.16□□□□□ -1.1
CTDSPL2-206ENST00000559175 POLA1P09884 1462 aaPredicted RBP8.15□□□□□ -1.1
CTDSPL2-206ENST00000559175 CCDC27Q2M243 656 aa8.15□□□□□ -1.1
CTDSPL2-206ENST00000559175 NUP160Q12769 1436 aa8.15□□□□□ -1.11
CTDSPL2-206ENST00000559175 SMARCA5O60264 1052 aaPredicted RBP8.15□□□□□ -1.11
CTDSPL2-206ENST00000559175 EEA1Q15075 1411 aa8.14□□□□□ -1.11
CTDSPL2-206ENST00000559175 SAMD9Q5K651 1589 aa8.13□□□□□ -1.11
CTDSPL2-206ENST00000559175 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-206ENST00000559175 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
CTDSPL2-206ENST00000559175 CLSPNQ9HAW4 1339 aa8.12□□□□□ -1.11
CTDSPL2-206ENST00000559175 GLI2P10070 1586 aa8.11□□□□□ -1.11
CTDSPL2-206ENST00000559175 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
CTDSPL2-206ENST00000559175 RIMBP3CA6NJZ7 1639 aa8.11□□□□□ -1.11
CTDSPL2-206ENST00000559175 RIMBP3BA6NNM3 1639 aa8.11□□□□□ -1.11
CTDSPL2-206ENST00000559175 RIMBP3Q9UFD9 1639 aa8.11□□□□□ -1.11
CTDSPL2-206ENST00000559175 KDM5BQ9UGL1 1544 aa8.1□□□□□ -1.11
CTDSPL2-206ENST00000559175 PROM2Q8N271 834 aa8.1□□□□□ -1.11
CTDSPL2-206ENST00000559175 KIF13AQ9H1H9 1805 aa8.1□□□□□ -1.11
CTDSPL2-206ENST00000559175 CEP170Q5SW79 1584 aa8.09□□□□□ -1.11
CTDSPL2-206ENST00000559175 SEMA3EO15041 775 aa8.09□□□□□ -1.11
CTDSPL2-206ENST00000559175 TRAK2O60296 914 aa8.09□□□□□ -1.11
CTDSPL2-206ENST00000559175 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-206ENST00000559175 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
CTDSPL2-206ENST00000559175 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
CTDSPL2-206ENST00000559175 MAPKBP1O60336 1514 aa8.07□□□□□ -1.12
CTDSPL2-206ENST00000559175 CCDC125Q86Z20 511 aa8.07□□□□□ -1.12
CTDSPL2-206ENST00000559175 UGGT2Q9NYU1 1516 aa8.06□□□□□ -1.12
CTDSPL2-206ENST00000559175 AAMPQ13685 434 aa8.06□□□□□ -1.12
CTDSPL2-206ENST00000559175 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 RNF25Q96BH1 459 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 UHRF1BP1LA0JNW5 1464 aa8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 BCORL1Q5H9F3 1711 aa8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 SYNJ2O15056 1496 aa8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
CTDSPL2-206ENST00000559175 CCDC97Q96F63 343 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-206ENST00000559175 RNF216Q9NWF9 866 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-206ENST00000559175 PPP1R1BQ9UD71 204 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-206ENST00000559175 ADCY10Q96PN6 1610 aa8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 ZMYND10O75800 440 aa8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 MAP3K4Q9Y6R4 1608 aa8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
CTDSPL2-206ENST00000559175 FGD5Q6ZNL6 1462 aa8.02□□□□□ -1.13
CTDSPL2-206ENST00000559175 GRIN2BQ13224 1484 aa8.02□□□□□ -1.13
CTDSPL2-206ENST00000559175 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-206ENST00000559175 RBM10P98175 930 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-206ENST00000559175 PRXQ9BXM0 1461 aa8.01□□□□□ -1.13
CTDSPL2-206ENST00000559175 BRD1O95696 1058 aa8□□□□□ -1.13
CTDSPL2-206ENST00000559175 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
CTDSPL2-206ENST00000559175 MAP3K1Q13233 1512 aa8□□□□□ -1.13
CTDSPL2-206ENST00000559175 CARNS1A5YM72 827 aa8□□□□□ -1.13
CTDSPL2-206ENST00000559175 CNPY4Q8N129 248 aa7.99□□□□□ -1.13
CTDSPL2-206ENST00000559175 MKRN4PQ13434 485 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 647.9 ms