RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 GPATCH8Q9UKJ3 1502 aaKnown RBP37.96■■■■□ 3.67
ZEB1-214ENST00000558863 EFCAB2Q5VUJ9 269 aa37.96■■■■□ 3.67
ZEB1-214ENST00000558863 ARHGAP5Q13017 1502 aa37.96■■■■□ 3.67
ZEB1-214ENST00000558863 ITSN2Q9NZM3 1697 aa37.94■■■■□ 3.66
ZEB1-214ENST00000558863 CDC42BPBQ9Y5S2 1711 aa37.93■■■■□ 3.66
ZEB1-214ENST00000558863 AKNAQ7Z591 1439 aa37.89■■■■□ 3.66
ZEB1-214ENST00000558863 KDM6BO15054 1643 aa37.88■■■■□ 3.66
ZEB1-214ENST00000558863 CFDP1Q9UEE9 299 aaPredicted RBP37.86■■■■□ 3.65
ZEB1-214ENST00000558863 ADGRL1O94910 1474 aa37.79■■■■□ 3.64
ZEB1-214ENST00000558863 MYOM3Q5VTT5 1437 aa37.79■■■■□ 3.64
ZEB1-214ENST00000558863 PLEKHH2Q8IVE3 1493 aa37.75■■■■□ 3.63
ZEB1-214ENST00000558863 COL17A1Q9UMD9 1497 aaPredicted RBP37.75■■■■□ 3.63
ZEB1-214ENST00000558863 MIA2Q96PC5 1412 aa37.75■■■■□ 3.63
ZEB1-214ENST00000558863 DENND4BO75064 1496 aaPredicted RBP37.74■■■■□ 3.63
ZEB1-214ENST00000558863 SCAPERQ9BY12 1400 aa37.72■■■■□ 3.63
ZEB1-214ENST00000558863 ZNF777Q9ULD5 760 aaPredicted RBP37.72■■■■□ 3.63
ZEB1-214ENST00000558863 SAMD9LQ8IVG5 1584 aa37.71■■■■□ 3.63
ZEB1-214ENST00000558863 ABCC1P33527 1531 aa37.71■■■■□ 3.63
ZEB1-214ENST00000558863 KIAA1107Q9UPP5 1409 aa37.69■■■■□ 3.62
ZEB1-214ENST00000558863 POGZQ7Z3K3 1410 aa37.64■■■■□ 3.62
ZEB1-214ENST00000558863 RICTORQ6R327 1708 aa37.63■■■■□ 3.61
ZEB1-214ENST00000558863 ZNF518AQ6AHZ1 1483 aa37.62■■■■□ 3.61
ZEB1-214ENST00000558863 FGD6Q6ZV73 1430 aa37.62■■■■□ 3.61
ZEB1-214ENST00000558863 CAMSAP2Q08AD1 1489 aa37.62■■■■□ 3.61
ZEB1-214ENST00000558863 RAPGEF3O95398 923 aa37.61■■■■□ 3.61
ZEB1-214ENST00000558863 PPARGC1BQ86YN6 1023 aaKnown RBP37.61■■■■□ 3.61
ZEB1-214ENST00000558863 FRMPD1Q5SYB0 1578 aa37.59■■■■□ 3.61
ZEB1-214ENST00000558863 SYCP2Q9BX26 1530 aa37.59■■■■□ 3.61
ZEB1-214ENST00000558863 ARHGEF12Q9NZN5 1544 aa37.58■■■■□ 3.61
ZEB1-214ENST00000558863 ZNF644Q9H582 1327 aaPredicted RBP37.57■■■■□ 3.61
ZEB1-214ENST00000558863 ZMYM4Q5VZL5 1548 aa37.55■■■■□ 3.6
ZEB1-214ENST00000558863 PTPN23Q9H3S7 1636 aa37.54■■■■□ 3.6
ZEB1-214ENST00000558863 RSPH4AQ5TD94 716 aa37.54■■■■□ 3.6
ZEB1-214ENST00000558863 HNRNPMP52272 730 aaKnown RBP eCLIP37.53■■■■□ 3.64e-6■■■■□ 20.1
ZEB1-214ENST00000558863 KDM5CP41229 1560 aa37.53■■■■□ 3.6
ZEB1-214ENST00000558863 TRAPPC8Q9Y2L5 1435 aa37.52■■■■□ 3.6
ZEB1-214ENST00000558863 TCOF1Q13428 1488 aaKnown RBP37.51■■■■□ 3.6
ZEB1-214ENST00000558863 MBD5Q9P267 1494 aa37.51■■■■□ 3.6
ZEB1-214ENST00000558863 MAGI2Q86UL8 1455 aa37.5■■■■□ 3.59
ZEB1-214ENST00000558863 AFAP1Q8N556 730 aa37.49■■■■□ 3.59
ZEB1-214ENST00000558863 ARHGEF5Q12774 1597 aa37.48■■■■□ 3.59
ZEB1-214ENST00000558863 CCDC141Q6ZP82 1450 aa37.45■■■■□ 3.59
ZEB1-214ENST00000558863 HECW2Q9P2P5 1572 aa37.43■■■■□ 3.58
ZEB1-214ENST00000558863 MLH3Q9UHC1 1453 aa37.42■■■■□ 3.58
ZEB1-214ENST00000558863 SPAG9O60271 1321 aaKnown RBP37.39■■■■□ 3.58
ZEB1-214ENST00000558863 ZFYVE16Q7Z3T8 1539 aa37.38■■■■□ 3.57
ZEB1-214ENST00000558863 ARHGEF40Q8TER5 1519 aa37.36■■■■□ 3.57
ZEB1-214ENST00000558863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.36■■■■□ 3.57
ZEB1-214ENST00000558863 FAM50AQ14320 339 aaKnown RBP37.35■■■■□ 3.57
ZEB1-214ENST00000558863 MYT1LQ9UL68 1186 aa37.34■■■■□ 3.57
ZEB1-214ENST00000558863 RTEL1-TNFRSF6BF6WH68 1400 aa37.33■■■■□ 3.57
ZEB1-214ENST00000558863 RRBP1Q9P2E9 1410 aaKnown RBP37.33■■■■□ 3.57
ZEB1-214ENST00000558863 TSPY4P0CV99 314 aa37.33■■■■□ 3.57
ZEB1-214ENST00000558863 TSPY10P0CW01 314 aa37.33■■■■□ 3.57
ZEB1-214ENST00000558863 INO80Q9ULG1 1556 aaPredicted RBP37.31■■■■□ 3.56
ZEB1-214ENST00000558863 DNMT1P26358 1616 aaKnown RBP37.31■■■■□ 3.56
ZEB1-214ENST00000558863 ATP7AQ04656 1500 aa37.31■■■■□ 3.56
ZEB1-214ENST00000558863 YEATS2Q9ULM3 1422 aa37.29■■■■□ 3.56
ZEB1-214ENST00000558863 KIDINS220Q9ULH0 1771 aa37.29■■■■□ 3.56
ZEB1-214ENST00000558863 DAPK1P53355 1430 aa37.28■■■■□ 3.56
ZEB1-214ENST00000558863 SHANK2Q9UPX8 1470 aa37.27■■■■□ 3.56
ZEB1-214ENST00000558863 MAST1Q9Y2H9 1570 aa37.26■■■■□ 3.56
ZEB1-214ENST00000558863 ABCC5O15440 1437 aa37.26■■■■□ 3.56
ZEB1-214ENST00000558863 CROCC2H7BZ55 1655 aa37.24■■■■□ 3.55
ZEB1-214ENST00000558863 ATP10AO60312 1499 aa37.24■■■■□ 3.55
ZEB1-214ENST00000558863 C9orf84Q5VXU9 1444 aa37.23■■■■□ 3.55
ZEB1-214ENST00000558863 DIP2CQ9Y2E4 1556 aa37.22■■■■□ 3.55
ZEB1-214ENST00000558863 ABCA6Q8N139 1617 aa37.21■■■■□ 3.55
ZEB1-214ENST00000558863 REREQ9P2R6 1566 aa37.18■■■■□ 3.54
ZEB1-214ENST00000558863 ADGBQ8N7X0 1667 aa37.13■■■■□ 3.54
ZEB1-214ENST00000558863 PLXNC1O60486 1568 aa37.12■■■■□ 3.53
ZEB1-214ENST00000558863 A2MP01023 1474 aa37.08■■■■□ 3.53
ZEB1-214ENST00000558863 ANKRD30AQ9BXX3 1397 aa37.08■■■■□ 3.53
ZEB1-214ENST00000558863 ADGRL2O95490 1459 aa37.06■■■■□ 3.52
ZEB1-214ENST00000558863 AGLP35573 1532 aa37.04■■■■□ 3.52
ZEB1-214ENST00000558863 ARID4BQ4LE39 1312 aaPredicted RBP37.04■■■■□ 3.52
ZEB1-214ENST00000558863 DHX29Q7Z478 1369 aaKnown RBP37.02■■■■□ 3.52
ZEB1-214ENST00000558863 CHIC2Q9UKJ5 165 aa37.02■■■■□ 3.52
ZEB1-214ENST00000558863 NCOA1Q15788 1441 aa37.01■■■■□ 3.52
ZEB1-214ENST00000558863 PTPRKQ15262 1439 aa37■■■■□ 3.51
ZEB1-214ENST00000558863 ROCK1Q13464 1354 aa37■■■■□ 3.51
ZEB1-214ENST00000558863 KIF15Q9NS87 1388 aa37■■■■□ 3.51
ZEB1-214ENST00000558863 ITGAEP38570 1179 aa36.99■■■■□ 3.51
ZEB1-214ENST00000558863 DUOX2Q9NRD8 1548 aa36.99■■■■□ 3.51
ZEB1-214ENST00000558863 SIGLEC1Q9BZZ2 1709 aa36.96■■■■□ 3.51
ZEB1-214ENST00000558863 RRP7BPQ9NSQ0 103 aa36.94■■■■□ 3.5
ZEB1-214ENST00000558863 BCORL1Q5H9F3 1711 aa36.91■■■■□ 3.5
ZEB1-214ENST00000558863 ERBINQ96RT1 1412 aa36.9■■■■□ 3.5
ZEB1-214ENST00000558863 EIF2AK4Q9P2K8 1649 aaKnown RBP36.88■■■■□ 3.49
ZEB1-214ENST00000558863 KIF3BO15066 747 aa36.81■■■■□ 3.48
ZEB1-214ENST00000558863 ADAMTSL3P82987 1691 aa36.8■■■■□ 3.48
ZEB1-214ENST00000558863 MLECQ14165 292 aa36.79■■■■□ 3.48
ZEB1-214ENST00000558863 ANKRD50Q9ULJ7 1429 aa36.79■■■■□ 3.48
ZEB1-214ENST00000558863 PPP6R1Q9UPN7 881 aa36.78■■■■□ 3.48
ZEB1-214ENST00000558863 RNF17Q9BXT8 1623 aaKnown RBP36.75■■■■□ 3.47
ZEB1-214ENST00000558863 KDM4FA0A1W2PPD8 638 aa36.73■■■■□ 3.47
ZEB1-214ENST00000558863 HFM1A2PYH4 1435 aa36.73■■■■□ 3.47
ZEB1-214ENST00000558863 GGT6Q6P531 493 aa36.73■■■■□ 3.47
ZEB1-214ENST00000558863 FAM135AQ9P2D6 1515 aa36.72■■■■□ 3.47
ZEB1-214ENST00000558863 ESF1Q9H501 851 aaKnown RBP36.7■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms