RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
HERC1-202ENST00000558324 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
HERC1-202ENST00000558324 ZFYVE16Q7Z3T8 1539 aa19.23■□□□□ 0.67
HERC1-202ENST00000558324 YEATS2Q9ULM3 1422 aa19.23■□□□□ 0.67
HERC1-202ENST00000558324 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
HERC1-202ENST00000558324 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
HERC1-202ENST00000558324 BCORL1Q5H9F3 1711 aa19.19■□□□□ 0.66
HERC1-202ENST00000558324 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
HERC1-202ENST00000558324 MAGI2Q86UL8 1455 aa19.18■□□□□ 0.66
HERC1-202ENST00000558324 CDC42BPBQ9Y5S2 1711 aa19.18■□□□□ 0.66
HERC1-202ENST00000558324 HECW2Q9P2P5 1572 aa19.17■□□□□ 0.66
HERC1-202ENST00000558324 MADDQ8WXG6 1647 aa19.17■□□□□ 0.66
HERC1-202ENST00000558324 PTPRMP28827 1452 aa19.16■□□□□ 0.66
HERC1-202ENST00000558324 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
HERC1-202ENST00000558324 SIGLEC1Q9BZZ2 1709 aa19.15■□□□□ 0.66
HERC1-202ENST00000558324 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
HERC1-202ENST00000558324 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
HERC1-202ENST00000558324 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
HERC1-202ENST00000558324 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
HERC1-202ENST00000558324 ABCC1P33527 1531 aa19.12■□□□□ 0.65
HERC1-202ENST00000558324 MTUS2Q5JR59 1369 aa19.12■□□□□ 0.65
HERC1-202ENST00000558324 KDM5CP41229 1560 aa19.11■□□□□ 0.65
HERC1-202ENST00000558324 MLECQ14165 292 aa19.11■□□□□ 0.65
HERC1-202ENST00000558324 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
HERC1-202ENST00000558324 RIMS1Q86UR5 1692 aaKnown RBP19.11■□□□□ 0.65
HERC1-202ENST00000558324 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
HERC1-202ENST00000558324 ATP10AO60312 1499 aa19.09■□□□□ 0.65
HERC1-202ENST00000558324 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
HERC1-202ENST00000558324 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
HERC1-202ENST00000558324 ITSN2Q9NZM3 1697 aa19.09■□□□□ 0.65
HERC1-202ENST00000558324 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
HERC1-202ENST00000558324 GPATCH8Q9UKJ3 1502 aaKnown RBP19.08■□□□□ 0.64
HERC1-202ENST00000558324 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
HERC1-202ENST00000558324 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
HERC1-202ENST00000558324 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
HERC1-202ENST00000558324 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
HERC1-202ENST00000558324 SYCP2Q9BX26 1530 aa19.05■□□□□ 0.64
HERC1-202ENST00000558324 ABCA6Q8N139 1617 aa19.04■□□□□ 0.64
HERC1-202ENST00000558324 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
HERC1-202ENST00000558324 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
HERC1-202ENST00000558324 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
HERC1-202ENST00000558324 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
HERC1-202ENST00000558324 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
HERC1-202ENST00000558324 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
HERC1-202ENST00000558324 KIDINS220Q9ULH0 1771 aa18.97■□□□□ 0.63
HERC1-202ENST00000558324 REREQ9P2R6 1566 aa18.97■□□□□ 0.63
HERC1-202ENST00000558324 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
HERC1-202ENST00000558324 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
HERC1-202ENST00000558324 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
HERC1-202ENST00000558324 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
HERC1-202ENST00000558324 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
HERC1-202ENST00000558324 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
HERC1-202ENST00000558324 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
HERC1-202ENST00000558324 ATP7AQ04656 1500 aa18.92■□□□□ 0.62
HERC1-202ENST00000558324 AGLP35573 1532 aa18.91■□□□□ 0.62
HERC1-202ENST00000558324 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
HERC1-202ENST00000558324 INO80Q9ULG1 1556 aaPredicted RBP18.9■□□□□ 0.62
HERC1-202ENST00000558324 LRRC9Q6ZRR7 1453 aa18.89■□□□□ 0.61
HERC1-202ENST00000558324 HSPA2P54652 639 aa18.88■□□□□ 0.61
HERC1-202ENST00000558324 CAMSAP2Q08AD1 1489 aa18.86■□□□□ 0.61
HERC1-202ENST00000558324 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
HERC1-202ENST00000558324 ESF1Q9H501 851 aaKnown RBP18.86■□□□□ 0.61
HERC1-202ENST00000558324 A2MP01023 1474 aa18.84■□□□□ 0.61
HERC1-202ENST00000558324 KANK4Q5T7N3 995 aaPredicted RBP18.84■□□□□ 0.61
HERC1-202ENST00000558324 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
HERC1-202ENST00000558324 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
HERC1-202ENST00000558324 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
HERC1-202ENST00000558324 C3P01024 1663 aa18.81■□□□□ 0.6
HERC1-202ENST00000558324 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
HERC1-202ENST00000558324 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
HERC1-202ENST00000558324 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
HERC1-202ENST00000558324 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
HERC1-202ENST00000558324 APLP2Q06481 763 aa18.77■□□□□ 0.6
HERC1-202ENST00000558324 GGT6Q6P531 493 aa18.77■□□□□ 0.6
HERC1-202ENST00000558324 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
HERC1-202ENST00000558324 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
HERC1-202ENST00000558324 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
HERC1-202ENST00000558324 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
HERC1-202ENST00000558324 CLTCQ00610 1675 aaKnown RBP18.74■□□□□ 0.59
HERC1-202ENST00000558324 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
HERC1-202ENST00000558324 RSPH4AQ5TD94 716 aa18.72■□□□□ 0.59
HERC1-202ENST00000558324 ZMYM3Q14202 1370 aa18.71■□□□□ 0.59
HERC1-202ENST00000558324 DHX29Q7Z478 1369 aaKnown RBP18.71■□□□□ 0.59
HERC1-202ENST00000558324 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
HERC1-202ENST00000558324 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
HERC1-202ENST00000558324 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
HERC1-202ENST00000558324 KIF3BO15066 747 aa18.69■□□□□ 0.58
HERC1-202ENST00000558324 NPATQ14207 1427 aa18.66■□□□□ 0.58
HERC1-202ENST00000558324 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.58
HERC1-202ENST00000558324 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
HERC1-202ENST00000558324 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
HERC1-202ENST00000558324 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
HERC1-202ENST00000558324 PTPN23Q9H3S7 1636 aa18.63■□□□□ 0.57
HERC1-202ENST00000558324 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
HERC1-202ENST00000558324 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
HERC1-202ENST00000558324 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
HERC1-202ENST00000558324 FGD6Q6ZV73 1430 aa18.6■□□□□ 0.57
HERC1-202ENST00000558324 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
HERC1-202ENST00000558324 CROCC2H7BZ55 1655 aa18.58■□□□□ 0.57
HERC1-202ENST00000558324 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms