RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ESF1Q9H501 851 aaKnown RBP6.94□□□□□ -1.3
HMG20A-204ENST00000558288 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
HMG20A-204ENST00000558288 PHF23Q9BUL5 403 aaPredicted RBP6.94□□□□□ -1.3
HMG20A-204ENST00000558288 PLB1Q6P1J6 1458 aa6.93□□□□□ -1.3
HMG20A-204ENST00000558288 PLEKHD1A6NEE1 506 aa6.93□□□□□ -1.3
HMG20A-204ENST00000558288 FAM9BQ8IZU0 186 aa6.93□□□□□ -1.3
HMG20A-204ENST00000558288 RTN4Q9NQC3 1192 aaKnown RBP6.93□□□□□ -1.3
HMG20A-204ENST00000558288 ANP32AP39687 249 aaKnown RBP6.93□□□□□ -1.3
HMG20A-204ENST00000558288 TIMELESSQ9UNS1 1208 aa6.93□□□□□ -1.3
HMG20A-204ENST00000558288 CD109Q6YHK3 1445 aa6.92□□□□□ -1.3
HMG20A-204ENST00000558288 ABCC2Q92887 1545 aa6.92□□□□□ -1.3
HMG20A-204ENST00000558288 HSPA2P54652 639 aa6.92□□□□□ -1.3
HMG20A-204ENST00000558288 ERICH6BQ5W0A0 696 aa6.92□□□□□ -1.3
HMG20A-204ENST00000558288 SALL2Q9Y467 1007 aaPredicted RBP6.92□□□□□ -1.3
HMG20A-204ENST00000558288 IQGAP2Q13576 1575 aa6.91□□□□□ -1.3
HMG20A-204ENST00000558288 CCDC136Q96JN2 1154 aa6.91□□□□□ -1.3
HMG20A-204ENST00000558288 ADCY10Q96PN6 1610 aa6.91□□□□□ -1.3
HMG20A-204ENST00000558288 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
HMG20A-204ENST00000558288 ZBTB47Q9UFB7 747 aaPredicted RBP6.9□□□□□ -1.3
HMG20A-204ENST00000558288 ADGRL1O94910 1474 aa6.9□□□□□ -1.3
HMG20A-204ENST00000558288 PRXQ9BXM0 1461 aa6.9□□□□□ -1.3
HMG20A-204ENST00000558288 CNGB1Q14028 1251 aaPredicted RBP6.9□□□□□ -1.31
HMG20A-204ENST00000558288 DIP2BQ9P265 1576 aa6.9□□□□□ -1.31
HMG20A-204ENST00000558288 ARHGAP35Q9NRY4 1499 aa6.89□□□□□ -1.31
HMG20A-204ENST00000558288 TEX14Q8IWB6 1497 aa6.89□□□□□ -1.31
HMG20A-204ENST00000558288 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
HMG20A-204ENST00000558288 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
HMG20A-204ENST00000558288 PHLDB1Q86UU1 1377 aa6.89□□□□□ -1.31
HMG20A-204ENST00000558288 CUL7Q14999 1698 aa6.88□□□□□ -1.31
HMG20A-204ENST00000558288 SHROOM2Q13796 1616 aa6.88□□□□□ -1.31
HMG20A-204ENST00000558288 KIF13AQ9H1H9 1805 aa6.88□□□□□ -1.31
HMG20A-204ENST00000558288 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
HMG20A-204ENST00000558288 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-204ENST00000558288 CCDC184Q52MB2 194 aa6.88□□□□□ -1.31
HMG20A-204ENST00000558288 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
HMG20A-204ENST00000558288 WDR7Q9Y4E6 1490 aa6.86□□□□□ -1.31
HMG20A-204ENST00000558288 EPRSP07814 1512 aaKnown RBP6.86□□□□□ -1.31
HMG20A-204ENST00000558288 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
HMG20A-204ENST00000558288 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
HMG20A-204ENST00000558288 TIAM1Q13009 1591 aa6.85□□□□□ -1.31
HMG20A-204ENST00000558288 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-204ENST00000558288 LRRC9Q6ZRR7 1453 aa6.85□□□□□ -1.31
HMG20A-204ENST00000558288 LAS1LQ9Y4W2 734 aaKnown RBP6.85□□□□□ -1.31
HMG20A-204ENST00000558288 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
HMG20A-204ENST00000558288 FHOD3Q2V2M9 1422 aa6.84□□□□□ -1.31
HMG20A-204ENST00000558288 CEBPAP49715 358 aaPredicted RBP6.84□□□□□ -1.31
HMG20A-204ENST00000558288 DISP1Q96F81 1524 aa6.84□□□□□ -1.31
HMG20A-204ENST00000558288 NEFMP07197 916 aa6.83□□□□□ -1.32
HMG20A-204ENST00000558288 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMG20A-204ENST00000558288 ZBED9Q6R2W3 1325 aa6.83□□□□□ -1.32
HMG20A-204ENST00000558288 POLR3GLQ9BT43 218 aa6.83□□□□□ -1.32
HMG20A-204ENST00000558288 PRKRIP1Q9H875 184 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-204ENST00000558288 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
HMG20A-204ENST00000558288 CCDC18Q5T9S5 1454 aa6.81□□□□□ -1.32
HMG20A-204ENST00000558288 AKNAQ7Z591 1439 aa6.81□□□□□ -1.32
HMG20A-204ENST00000558288 CNTLNQ9NXG0 1405 aa6.8□□□□□ -1.32
HMG20A-204ENST00000558288 KIAA0556O60303 1618 aa6.8□□□□□ -1.32
HMG20A-204ENST00000558288 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
HMG20A-204ENST00000558288 KDM5BQ9UGL1 1544 aa6.8□□□□□ -1.32
HMG20A-204ENST00000558288 ZCCHC11Q5TAX3 1644 aaKnown RBP6.8□□□□□ -1.32
HMG20A-204ENST00000558288 AFAP1Q8N556 730 aa6.79□□□□□ -1.32
HMG20A-204ENST00000558288 FBXO41Q8TF61 875 aa6.79□□□□□ -1.32
HMG20A-204ENST00000558288 MAP3K1Q13233 1512 aa6.79□□□□□ -1.32
HMG20A-204ENST00000558288 UHRF1BP1LA0JNW5 1464 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 HECW2Q9P2P5 1572 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 GGT6Q6P531 493 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 NUDCQ9Y266 331 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 UGGT2Q9NYU1 1516 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 C11orf95C9JLR9 678 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-204ENST00000558288 RRP7BPQ9NSQ0 103 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 ATP10BO94823 1461 aa6.78□□□□□ -1.32
HMG20A-204ENST00000558288 POGZQ7Z3K3 1410 aa6.77□□□□□ -1.33
HMG20A-204ENST00000558288 CCDC7Q96M83 1385 aa6.76□□□□□ -1.33
HMG20A-204ENST00000558288 DISP3Q9P2K9 1392 aa6.76□□□□□ -1.33
HMG20A-204ENST00000558288 BRPF3Q9ULD4 1205 aa6.76□□□□□ -1.33
HMG20A-204ENST00000558288 PCF11O94913 1555 aaKnown RBP6.76□□□□□ -1.33
HMG20A-204ENST00000558288 MTUS2Q5JR59 1369 aa6.76□□□□□ -1.33
HMG20A-204ENST00000558288 SCAPERQ9BY12 1400 aa6.76□□□□□ -1.33
HMG20A-204ENST00000558288 PPM1GO15355 546 aaPredicted RBP6.75□□□□□ -1.33
HMG20A-204ENST00000558288 DENND4BO75064 1496 aaPredicted RBP6.75□□□□□ -1.33
HMG20A-204ENST00000558288 FGD6Q6ZV73 1430 aa6.75□□□□□ -1.33
HMG20A-204ENST00000558288 SMG6Q86US8 1419 aaKnown RBP6.75□□□□□ -1.33
HMG20A-204ENST00000558288 FOXD1Q16676 465 aa6.75□□□□□ -1.33
HMG20A-204ENST00000558288 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
HMG20A-204ENST00000558288 L3MBTL2Q969R5 705 aa6.75□□□□□ -1.33
HMG20A-204ENST00000558288 DAXXQ9UER7 740 aaPredicted RBP6.75□□□□□ -1.33
HMG20A-204ENST00000558288 HFM1A2PYH4 1435 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 FANCAO15360 1455 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 PDE4AP27815 886 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 FMN1Q68DA7 1419 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 NCOA2Q15596 1464 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 PIP4K2BP78356 416 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 CFAP43Q8NDM7 1665 aa6.74□□□□□ -1.33
HMG20A-204ENST00000558288 PTPRKQ15262 1439 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 PTPRMP28827 1452 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 TCERG1O14776 1098 aaKnown RBP6.73□□□□□ -1.33
HMG20A-204ENST00000558288 GLI2P10070 1586 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 KIF7Q2M1P5 1343 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms