RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 CLSTN1O94985 981 aa17.77■□□□□ 0.43
SEMA6D-208ENST00000558014 NGDNQ8NEJ9 315 aaKnown RBP17.76■□□□□ 0.43
SEMA6D-208ENST00000558014 RGS3P49796 1198 aa17.75■□□□□ 0.43
SEMA6D-208ENST00000558014 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
SEMA6D-208ENST00000558014 MSH5O43196 834 aa17.74■□□□□ 0.43
SEMA6D-208ENST00000558014 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
SEMA6D-208ENST00000558014 AMER1Q5JTC6 1135 aaPredicted RBP17.73■□□□□ 0.43
SEMA6D-208ENST00000558014 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
SEMA6D-208ENST00000558014 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
SEMA6D-208ENST00000558014 ZRSR1Q15695 479 aaKnown RBP17.71■□□□□ 0.43
SEMA6D-208ENST00000558014 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
SEMA6D-208ENST00000558014 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
SEMA6D-208ENST00000558014 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
SEMA6D-208ENST00000558014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
SEMA6D-208ENST00000558014 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
SEMA6D-208ENST00000558014 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
SEMA6D-208ENST00000558014 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
SEMA6D-208ENST00000558014 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 NUP155O75694 1391 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 G3V3G9 751 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 DCAF8Q5TAQ9 597 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
SEMA6D-208ENST00000558014 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.42
SEMA6D-208ENST00000558014 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.42
SEMA6D-208ENST00000558014 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.42
SEMA6D-208ENST00000558014 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
SEMA6D-208ENST00000558014 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
SEMA6D-208ENST00000558014 EVA1CP58658 441 aa17.63■□□□□ 0.41
SEMA6D-208ENST00000558014 AMPHP49418 695 aa17.62■□□□□ 0.41
SEMA6D-208ENST00000558014 BECN1Q14457 450 aa17.61■□□□□ 0.41
SEMA6D-208ENST00000558014 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
SEMA6D-208ENST00000558014 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
SEMA6D-208ENST00000558014 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
SEMA6D-208ENST00000558014 ROCK2O75116 1388 aaKnown RBP17.59■□□□□ 0.41
SEMA6D-208ENST00000558014 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.4
SEMA6D-208ENST00000558014 TAF7LQ5H9L4 462 aa17.57■□□□□ 0.4
SEMA6D-208ENST00000558014 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
SEMA6D-208ENST00000558014 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
SEMA6D-208ENST00000558014 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
SEMA6D-208ENST00000558014 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
SEMA6D-208ENST00000558014 MPHOSPH9Q99550 1183 aa17.53■□□□□ 0.4
SEMA6D-208ENST00000558014 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.4
SEMA6D-208ENST00000558014 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.39
SEMA6D-208ENST00000558014 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
SEMA6D-208ENST00000558014 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
SEMA6D-208ENST00000558014 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
SEMA6D-208ENST00000558014 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
SEMA6D-208ENST00000558014 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
SEMA6D-208ENST00000558014 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
SEMA6D-208ENST00000558014 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
SEMA6D-208ENST00000558014 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
SEMA6D-208ENST00000558014 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
SEMA6D-208ENST00000558014 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
SEMA6D-208ENST00000558014 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
SEMA6D-208ENST00000558014 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
SEMA6D-208ENST00000558014 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
SEMA6D-208ENST00000558014 MS4A1P11836 297 aa17.46■□□□□ 0.39
SEMA6D-208ENST00000558014 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
SEMA6D-208ENST00000558014 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
SEMA6D-208ENST00000558014 MINK1Q8N4C8 1332 aaPredicted RBP17.45■□□□□ 0.38
SEMA6D-208ENST00000558014 WIZO95785 1651 aa17.45■□□□□ 0.38
SEMA6D-208ENST00000558014 PTPRGP23470 1445 aa17.45■□□□□ 0.38
SEMA6D-208ENST00000558014 DDRGK1Q96HY6 314 aa17.44■□□□□ 0.38
SEMA6D-208ENST00000558014 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
SEMA6D-208ENST00000558014 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
SEMA6D-208ENST00000558014 KTN1Q86UP2 1357 aaKnown RBP17.43■□□□□ 0.38
SEMA6D-208ENST00000558014 PSME1Q06323 249 aa17.42■□□□□ 0.38
SEMA6D-208ENST00000558014 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
SEMA6D-208ENST00000558014 TRIM44Q96DX7 344 aaPredicted RBP17.41■□□□□ 0.38
SEMA6D-208ENST00000558014 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
SEMA6D-208ENST00000558014 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
SEMA6D-208ENST00000558014 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
SEMA6D-208ENST00000558014 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
SEMA6D-208ENST00000558014 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
SEMA6D-208ENST00000558014 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
SEMA6D-208ENST00000558014 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
SEMA6D-208ENST00000558014 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
SEMA6D-208ENST00000558014 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
SEMA6D-208ENST00000558014 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
SEMA6D-208ENST00000558014 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
SEMA6D-208ENST00000558014 DNTTIP2Q5QJE6 756 aaKnown RBP17.37■□□□□ 0.37
SEMA6D-208ENST00000558014 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
SEMA6D-208ENST00000558014 ATF3P18847 181 aa17.36■□□□□ 0.37
SEMA6D-208ENST00000558014 RAD21O60216 631 aa17.36■□□□□ 0.37
SEMA6D-208ENST00000558014 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 MCCP23508 829 aa17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 VPS53Q5VIR6 699 aa17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SEMA6D-208ENST00000558014 CALD1Q05682 793 aaKnown RBP17.34■□□□□ 0.37
SEMA6D-208ENST00000558014 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
SEMA6D-208ENST00000558014 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
SEMA6D-208ENST00000558014 COG3Q96JB2 828 aa17.33■□□□□ 0.37
SEMA6D-208ENST00000558014 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms