RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SCAPERQ9BY12 1400 aa30.86■■■□□ 2.53
ABCD4-228ENST00000557588 MYO5CQ9NQX4 1742 aa30.84■■■□□ 2.53
ABCD4-228ENST00000557588 C9orf84Q5VXU9 1444 aa30.81■■■□□ 2.52
ABCD4-228ENST00000557588 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
ABCD4-228ENST00000557588 ATP10AO60312 1499 aa30.81■■■□□ 2.52
ABCD4-228ENST00000557588 PLPPR3Q6T4P5 718 aa30.8■■■□□ 2.52
ABCD4-228ENST00000557588 MLECQ14165 292 aa30.77■■■□□ 2.52
ABCD4-228ENST00000557588 FMN1Q68DA7 1419 aa30.74■■■□□ 2.51
ABCD4-228ENST00000557588 KIF14Q15058 1648 aa30.74■■■□□ 2.51
ABCD4-228ENST00000557588 CERKQ8TCT0 537 aa30.74■■■□□ 2.51
ABCD4-228ENST00000557588 KDM5CP41229 1560 aa30.74■■■□□ 2.51
ABCD4-228ENST00000557588 ZNF518AQ6AHZ1 1483 aa30.72■■■□□ 2.51
ABCD4-228ENST00000557588 EFCAB2Q5VUJ9 269 aa30.7■■■□□ 2.51
ABCD4-228ENST00000557588 ARHGAP35Q9NRY4 1499 aa30.67■■■□□ 2.5
ABCD4-228ENST00000557588 REREQ9P2R6 1566 aa30.66■■■□□ 2.5
ABCD4-228ENST00000557588 ARHGAP5Q13017 1502 aa30.65■■■□□ 2.5
ABCD4-228ENST00000557588 TROQ12816 1431 aaPredicted RBP30.64■■■□□ 2.5
ABCD4-228ENST00000557588 DIP2CQ9Y2E4 1556 aa30.64■■■□□ 2.5
ABCD4-228ENST00000557588 STRCQ7RTU9 1775 aa30.64■■■□□ 2.49
ABCD4-228ENST00000557588 CDK11AQ9UQ88 783 aaPredicted RBP30.61■■■□□ 2.49
ABCD4-228ENST00000557588 LRRIQ1Q96JM4 1722 aa30.6■■■□□ 2.49
ABCD4-228ENST00000557588 UHRF1BP1Q6BDS2 1440 aa30.59■■■□□ 2.49
ABCD4-228ENST00000557588 ABCA6Q8N139 1617 aa30.58■■■□□ 2.49
ABCD4-228ENST00000557588 CLIP1P30622 1438 aa30.58■■■□□ 2.49
ABCD4-228ENST00000557588 CEBPAP49715 358 aaPredicted RBP30.57■■■□□ 2.48
ABCD4-228ENST00000557588 CDC42BPBQ9Y5S2 1711 aa30.56■■■□□ 2.48
ABCD4-228ENST00000557588 ATP1B4Q9UN42 357 aaPredicted RBP30.55■■■□□ 2.48
ABCD4-228ENST00000557588 SETD1BQ9UPS6 1966 aaKnown RBP30.55■■■□□ 2.48
ABCD4-228ENST00000557588 MLH3Q9UHC1 1453 aa30.55■■■□□ 2.48
ABCD4-228ENST00000557588 C3P01024 1663 aa30.54■■■□□ 2.48
ABCD4-228ENST00000557588 PREX2Q70Z35 1606 aa30.54■■■□□ 2.48
ABCD4-228ENST00000557588 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
ABCD4-228ENST00000557588 ABCC1P33527 1531 aa30.52■■■□□ 2.48
ABCD4-228ENST00000557588 AGLP35573 1532 aa30.52■■■□□ 2.48
ABCD4-228ENST00000557588 DMRT2Q9Y5R5 561 aa30.52■■■□□ 2.48
ABCD4-228ENST00000557588 UBTFP17480 764 aaKnown RBP30.5■■■□□ 2.47
ABCD4-228ENST00000557588 ITSN2Q9NZM3 1697 aa30.49■■■□□ 2.47
ABCD4-228ENST00000557588 PTPRTO14522 1441 aa30.46■■■□□ 2.47
ABCD4-228ENST00000557588 TRAPPC8Q9Y2L5 1435 aa30.43■■■□□ 2.46
ABCD4-228ENST00000557588 CCDC18Q5T9S5 1454 aa30.42■■■□□ 2.46
ABCD4-228ENST00000557588 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
ABCD4-228ENST00000557588 MYT1LQ9UL68 1186 aa30.4■■■□□ 2.46
ABCD4-228ENST00000557588 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.46
ABCD4-228ENST00000557588 CDC42BPAQ5VT25 1732 aa30.38■■■□□ 2.45
ABCD4-228ENST00000557588 CNTLNQ9NXG0 1405 aa30.37■■■□□ 2.45
ABCD4-228ENST00000557588 CASKIN1Q8WXD9 1431 aa30.36■■■□□ 2.45
ABCD4-228ENST00000557588 LTBP4Q8N2S1 1624 aa30.36■■■□□ 2.45
ABCD4-228ENST00000557588 DISP3Q9P2K9 1392 aa30.35■■■□□ 2.45
ABCD4-228ENST00000557588 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
ABCD4-228ENST00000557588 IQSEC2Q5JU85 1478 aa30.33■■■□□ 2.45
ABCD4-228ENST00000557588 NCOA1Q15788 1441 aa30.33■■■□□ 2.45
ABCD4-228ENST00000557588 ESF1Q9H501 851 aaKnown RBP30.31■■■□□ 2.44
ABCD4-228ENST00000557588 SAMD9LQ8IVG5 1584 aa30.31■■■□□ 2.44
ABCD4-228ENST00000557588 SPATA31D1Q6ZQQ2 1576 aa30.3■■■□□ 2.44
ABCD4-228ENST00000557588 NPATQ14207 1427 aa30.29■■■□□ 2.44
ABCD4-228ENST00000557588 ILDR2Q71H61 639 aa30.27■■■□□ 2.44
ABCD4-228ENST00000557588 FYCO1Q9BQS8 1478 aa30.25■■■□□ 2.43
ABCD4-228ENST00000557588 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
ABCD4-228ENST00000557588 CAMSAP1Q5T5Y3 1602 aa30.23■■■□□ 2.43
ABCD4-228ENST00000557588 PLXNC1O60486 1568 aa30.21■■■□□ 2.43
ABCD4-228ENST00000557588 ZNF142P52746 1687 aaPredicted RBP30.2■■■□□ 2.43
ABCD4-228ENST00000557588 SOCS7O14512 581 aa30.2■■■□□ 2.43
ABCD4-228ENST00000557588 INO80Q9ULG1 1556 aaPredicted RBP30.19■■■□□ 2.42
ABCD4-228ENST00000557588 SUPT6HQ7KZ85 1726 aaKnown RBP30.18■■■□□ 2.42
ABCD4-228ENST00000557588 ATP7AQ04656 1500 aa30.17■■■□□ 2.42
ABCD4-228ENST00000557588 GPATCH8Q9UKJ3 1502 aaKnown RBP30.17■■■□□ 2.42
ABCD4-228ENST00000557588 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
ABCD4-228ENST00000557588 CLTCQ00610 1675 aaKnown RBP30.15■■■□□ 2.42
ABCD4-228ENST00000557588 ZMYM3Q14202 1370 aa30.15■■■□□ 2.42
ABCD4-228ENST00000557588 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
ABCD4-228ENST00000557588 SPAG9O60271 1321 aaKnown RBP30.12■■■□□ 2.41
ABCD4-228ENST00000557588 KIAA1107Q9UPP5 1409 aa30.12■■■□□ 2.41
ABCD4-228ENST00000557588 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
ABCD4-228ENST00000557588 PLEKHH2Q8IVE3 1493 aa30.11■■■□□ 2.41
ABCD4-228ENST00000557588 CEP170BQ9Y4F5 1589 aaPredicted RBP30.1■■■□□ 2.41
ABCD4-228ENST00000557588 A2MP01023 1474 aa30.08■■■□□ 2.41
ABCD4-228ENST00000557588 ZNF777Q9ULD5 760 aaPredicted RBP30.08■■■□□ 2.41
ABCD4-228ENST00000557588 TCOF1Q13428 1488 aaKnown RBP30.06■■■□□ 2.4
ABCD4-228ENST00000557588 PTPRKQ15262 1439 aa30.05■■■□□ 2.4
ABCD4-228ENST00000557588 ADGBQ8N7X0 1667 aa30.04■■■□□ 2.4
ABCD4-228ENST00000557588 HNRNPMP52272 730 aaKnown RBP eCLIP30.03■■■□□ 2.4
ABCD4-228ENST00000557588 ZNF335Q9H4Z2 1342 aaPredicted RBP30.01■■■□□ 2.4
ABCD4-228ENST00000557588 NCKAP5LQ9HCH0 1330 aa30.01■■■□□ 2.4
ABCD4-228ENST00000557588 PKD2Q13563 968 aa29.99■■■□□ 2.39
ABCD4-228ENST00000557588 CFDP1Q9UEE9 299 aaPredicted RBP29.97■■■□□ 2.39
ABCD4-228ENST00000557588 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
ABCD4-228ENST00000557588 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
ABCD4-228ENST00000557588 PPP6R1Q9UPN7 881 aa29.93■■■□□ 2.38
ABCD4-228ENST00000557588 A2ML1A8K2U0 1454 aa29.92■■■□□ 2.38
ABCD4-228ENST00000557588 UBAP1LF5GYI3 381 aa29.91■■■□□ 2.38
ABCD4-228ENST00000557588 DNMT1P26358 1616 aaKnown RBP29.91■■■□□ 2.38
ABCD4-228ENST00000557588 GGT6Q6P531 493 aa29.9■■■□□ 2.38
ABCD4-228ENST00000557588 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
ABCD4-228ENST00000557588 MBD5Q9P267 1494 aa29.89■■■□□ 2.38
ABCD4-228ENST00000557588 POLR1AO95602 1720 aaPredicted RBP29.88■■■□□ 2.37
ABCD4-228ENST00000557588 EHBP1L1Q8N3D4 1523 aa29.87■■■□□ 2.37
ABCD4-228ENST00000557588 RTEL1-TNFRSF6BF6WH68 1400 aa29.87■■■□□ 2.37
ABCD4-228ENST00000557588 FAM135AQ9P2D6 1515 aa29.86■■■□□ 2.37
ABCD4-228ENST00000557588 NEURL4Q96JN8 1562 aa29.84■■■□□ 2.37
ABCD4-228ENST00000557588 ZNF644Q9H582 1327 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms