RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 KIAA0556O60303 1618 aa14.84□□□□□ -0.03
VRK1-206ENST00000557222 PPRC1Q5VV67 1664 aaKnown RBP14.84□□□□□ -0.03
VRK1-206ENST00000557222 HAX1O00165 279 aa14.84□□□□□ -0.03
VRK1-206ENST00000557222 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
VRK1-206ENST00000557222 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
VRK1-206ENST00000557222 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
VRK1-206ENST00000557222 ZCCHC11Q5TAX3 1644 aaKnown RBP14.81□□□□□ -0.04
VRK1-206ENST00000557222 WDR7Q9Y4E6 1490 aa14.79□□□□□ -0.04
VRK1-206ENST00000557222 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
VRK1-206ENST00000557222 COL17A1Q9UMD9 1497 aaPredicted RBP14.77□□□□□ -0.04
VRK1-206ENST00000557222 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
VRK1-206ENST00000557222 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.05
VRK1-206ENST00000557222 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
VRK1-206ENST00000557222 ABCA8O94911 1581 aa14.74□□□□□ -0.05
VRK1-206ENST00000557222 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
VRK1-206ENST00000557222 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
VRK1-206ENST00000557222 CD109Q6YHK3 1445 aa14.73□□□□□ -0.05
VRK1-206ENST00000557222 ADGRL1O94910 1474 aa14.72□□□□□ -0.05
VRK1-206ENST00000557222 EVX2Q03828 476 aa14.71□□□□□ -0.05
VRK1-206ENST00000557222 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
VRK1-206ENST00000557222 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
VRK1-206ENST00000557222 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
VRK1-206ENST00000557222 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
VRK1-206ENST00000557222 PHLDB1Q86UU1 1377 aa14.66□□□□□ -0.06
VRK1-206ENST00000557222 ATP10BO94823 1461 aa14.63□□□□□ -0.07
VRK1-206ENST00000557222 ARAP3Q8WWN8 1544 aa14.63□□□□□ -0.07
VRK1-206ENST00000557222 EEA1Q15075 1411 aa14.6□□□□□ -0.07
VRK1-206ENST00000557222 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
VRK1-206ENST00000557222 SAMD9Q5K651 1589 aa14.59□□□□□ -0.07
VRK1-206ENST00000557222 ABCA9Q8IUA7 1624 aa14.57□□□□□ -0.08
VRK1-206ENST00000557222 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
VRK1-206ENST00000557222 NEO1Q92859 1461 aa14.56□□□□□ -0.08
VRK1-206ENST00000557222 CD44P16070 742 aaKnown RBP14.55□□□□□ -0.08
VRK1-206ENST00000557222 RAPGEF6Q8TEU7 1601 aa14.54□□□□□ -0.08
VRK1-206ENST00000557222 HECW2Q9P2P5 1572 aa14.53□□□□□ -0.08
VRK1-206ENST00000557222 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
VRK1-206ENST00000557222 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
VRK1-206ENST00000557222 MIER1Q8N108 512 aa14.52□□□□□ -0.09
VRK1-206ENST00000557222 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
VRK1-206ENST00000557222 PLEKHD1A6NEE1 506 aa14.5□□□□□ -0.09
VRK1-206ENST00000557222 KIF21BO75037 1637 aa14.48□□□□□ -0.09
VRK1-206ENST00000557222 RAPGEF3O95398 923 aa14.48□□□□□ -0.09
VRK1-206ENST00000557222 FHOD3Q2V2M9 1422 aa14.46□□□□□ -0.09
VRK1-206ENST00000557222 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
VRK1-206ENST00000557222 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
VRK1-206ENST00000557222 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
VRK1-206ENST00000557222 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
VRK1-206ENST00000557222 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
VRK1-206ENST00000557222 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
VRK1-206ENST00000557222 PTPRMP28827 1452 aa14.43□□□□□ -0.1
VRK1-206ENST00000557222 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
VRK1-206ENST00000557222 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
VRK1-206ENST00000557222 FRMPD1Q5SYB0 1578 aa14.41□□□□□ -0.1
VRK1-206ENST00000557222 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
VRK1-206ENST00000557222 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.1
VRK1-206ENST00000557222 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
VRK1-206ENST00000557222 FANCAO15360 1455 aa14.39□□□□□ -0.11
VRK1-206ENST00000557222 BCORL1Q5H9F3 1711 aa14.39□□□□□ -0.11
VRK1-206ENST00000557222 GABBR2O75899 941 aa14.39□□□□□ -0.11
VRK1-206ENST00000557222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.38□□□□□ -0.11
VRK1-206ENST00000557222 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
VRK1-206ENST00000557222 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
VRK1-206ENST00000557222 RICTORQ6R327 1708 aa14.36□□□□□ -0.11
VRK1-206ENST00000557222 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
VRK1-206ENST00000557222 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
VRK1-206ENST00000557222 PLCH2O75038 1416 aa14.35□□□□□ -0.11
VRK1-206ENST00000557222 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
VRK1-206ENST00000557222 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
VRK1-206ENST00000557222 CDK11AQ9UQ88 783 aaPredicted RBP14.35□□□□□ -0.11
VRK1-206ENST00000557222 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
VRK1-206ENST00000557222 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
VRK1-206ENST00000557222 MADDQ8WXG6 1647 aa14.33□□□□□ -0.12
VRK1-206ENST00000557222 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
VRK1-206ENST00000557222 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
VRK1-206ENST00000557222 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
VRK1-206ENST00000557222 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
VRK1-206ENST00000557222 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
VRK1-206ENST00000557222 ZFYVE16Q7Z3T8 1539 aa14.31□□□□□ -0.12
VRK1-206ENST00000557222 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
VRK1-206ENST00000557222 SCAPERQ9BY12 1400 aa14.3□□□□□ -0.12
VRK1-206ENST00000557222 LMTK3Q96Q04 1460 aa14.29□□□□□ -0.12
VRK1-206ENST00000557222 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
VRK1-206ENST00000557222 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
VRK1-206ENST00000557222 YEATS2Q9ULM3 1422 aa14.28□□□□□ -0.12
VRK1-206ENST00000557222 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
VRK1-206ENST00000557222 CLCN6P51797 869 aa14.27□□□□□ -0.13
VRK1-206ENST00000557222 ATP10AO60312 1499 aa14.26□□□□□ -0.13
VRK1-206ENST00000557222 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
VRK1-206ENST00000557222 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
VRK1-206ENST00000557222 TROQ12816 1431 aaPredicted RBP14.25□□□□□ -0.13
VRK1-206ENST00000557222 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
VRK1-206ENST00000557222 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
VRK1-206ENST00000557222 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
VRK1-206ENST00000557222 CLIP1P30622 1438 aa14.24□□□□□ -0.13
VRK1-206ENST00000557222 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
VRK1-206ENST00000557222 MYO5CQ9NQX4 1742 aa14.23□□□□□ -0.13
VRK1-206ENST00000557222 ZNF518AQ6AHZ1 1483 aa14.23□□□□□ -0.13
VRK1-206ENST00000557222 ARHGEF12Q9NZN5 1544 aa14.21□□□□□ -0.13
VRK1-206ENST00000557222 KIF14Q15058 1648 aa14.21□□□□□ -0.13
VRK1-206ENST00000557222 NUBP1P53384 320 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms