RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 LRRC9Q6ZRR7 1453 aa38.71■■■■□ 3.79
SDR39U1-221ENST00000556707 SUPT6HQ7KZ85 1726 aaKnown RBP38.69■■■■□ 3.78
SDR39U1-221ENST00000556707 GPATCH8Q9UKJ3 1502 aaKnown RBP38.68■■■■□ 3.78
SDR39U1-221ENST00000556707 ADGRL1O94910 1474 aa38.67■■■■□ 3.78
SDR39U1-221ENST00000556707 DENND4BO75064 1496 aaPredicted RBP38.66■■■■□ 3.78
SDR39U1-221ENST00000556707 RAPGEF3O95398 923 aa38.66■■■■□ 3.78
SDR39U1-221ENST00000556707 APLP2Q06481 763 aa38.66■■■■□ 3.78
SDR39U1-221ENST00000556707 CCNB3Q8WWL7 1395 aa38.66■■■■□ 3.78
SDR39U1-221ENST00000556707 RICTORQ6R327 1708 aa38.66■■■■□ 3.78
SDR39U1-221ENST00000556707 FRMPD1Q5SYB0 1578 aa38.65■■■■□ 3.78
SDR39U1-221ENST00000556707 KANK4Q5T7N3 995 aaPredicted RBP38.62■■■■□ 3.77
SDR39U1-221ENST00000556707 SCAPERQ9BY12 1400 aa38.61■■■■□ 3.77
SDR39U1-221ENST00000556707 NCOA2Q15596 1464 aa38.6■■■■□ 3.77
SDR39U1-221ENST00000556707 ITSN2Q9NZM3 1697 aa38.58■■■■□ 3.77
SDR39U1-221ENST00000556707 POGZQ7Z3K3 1410 aa38.54■■■■□ 3.76
SDR39U1-221ENST00000556707 CFDP1Q9UEE9 299 aaPredicted RBP38.53■■■■□ 3.76
SDR39U1-221ENST00000556707 ABCC1P33527 1531 aa38.52■■■■□ 3.76
SDR39U1-221ENST00000556707 SAMD9LQ8IVG5 1584 aa38.5■■■■□ 3.75
SDR39U1-221ENST00000556707 ZMYM4Q5VZL5 1548 aa38.49■■■■□ 3.75
SDR39U1-221ENST00000556707 ZNF777Q9ULD5 760 aaPredicted RBP38.48■■■■□ 3.75
SDR39U1-221ENST00000556707 ARHGEF12Q9NZN5 1544 aa38.45■■■■□ 3.75
SDR39U1-221ENST00000556707 ZNF518AQ6AHZ1 1483 aa38.44■■■■□ 3.74
SDR39U1-221ENST00000556707 PLEKHH2Q8IVE3 1493 aa38.41■■■■□ 3.74
SDR39U1-221ENST00000556707 KDM5CP41229 1560 aa38.4■■■■□ 3.74
SDR39U1-221ENST00000556707 MAGI2Q86UL8 1455 aa38.39■■■■□ 3.74
SDR39U1-221ENST00000556707 KIAA1107Q9UPP5 1409 aa38.38■■■■□ 3.74
SDR39U1-221ENST00000556707 SYCP2Q9BX26 1530 aa38.38■■■■□ 3.74
SDR39U1-221ENST00000556707 AFAP1Q8N556 730 aa38.38■■■■□ 3.73
SDR39U1-221ENST00000556707 ARHGEF40Q8TER5 1519 aa38.38■■■■□ 3.73
SDR39U1-221ENST00000556707 TRAPPC8Q9Y2L5 1435 aa38.38■■■■□ 3.73
SDR39U1-221ENST00000556707 ZFYVE16Q7Z3T8 1539 aa38.34■■■■□ 3.73
SDR39U1-221ENST00000556707 ZNF644Q9H582 1327 aaPredicted RBP38.33■■■■□ 3.73
SDR39U1-221ENST00000556707 MYOM3Q5VTT5 1437 aa38.31■■■■□ 3.72
SDR39U1-221ENST00000556707 HNRNPMP52272 730 aaKnown RBP eCLIP38.31■■■■□ 3.72
SDR39U1-221ENST00000556707 YEATS2Q9ULM3 1422 aa38.3■■■■□ 3.72
SDR39U1-221ENST00000556707 HECW2Q9P2P5 1572 aa38.3■■■■□ 3.72
SDR39U1-221ENST00000556707 CAMSAP2Q08AD1 1489 aa38.27■■■■□ 3.72
SDR39U1-221ENST00000556707 MLH3Q9UHC1 1453 aa38.26■■■■□ 3.72
SDR39U1-221ENST00000556707 MIA2Q96PC5 1412 aa38.25■■■■□ 3.71
SDR39U1-221ENST00000556707 MBD5Q9P267 1494 aa38.23■■■■□ 3.71
SDR39U1-221ENST00000556707 KIDINS220Q9ULH0 1771 aa38.2■■■■□ 3.71
SDR39U1-221ENST00000556707 MYT1LQ9UL68 1186 aa38.19■■■■□ 3.7
SDR39U1-221ENST00000556707 ATP10AO60312 1499 aa38.17■■■■□ 3.7
SDR39U1-221ENST00000556707 DIP2CQ9Y2E4 1556 aa38.15■■■■□ 3.7
SDR39U1-221ENST00000556707 KDM4FA0A1W2PPD8 638 aa38.15■■■■□ 3.7
SDR39U1-221ENST00000556707 SPAG9O60271 1321 aaKnown RBP38.14■■■■□ 3.7
SDR39U1-221ENST00000556707 ABCA6Q8N139 1617 aa38.14■■■■□ 3.7
SDR39U1-221ENST00000556707 ARHGEF5Q12774 1597 aa38.12■■■■□ 3.69
SDR39U1-221ENST00000556707 SIGLEC1Q9BZZ2 1709 aa38.12■■■■□ 3.69
SDR39U1-221ENST00000556707 C9orf84Q5VXU9 1444 aa38.12■■■■□ 3.69
SDR39U1-221ENST00000556707 INO80Q9ULG1 1556 aaPredicted RBP38.11■■■■□ 3.69
SDR39U1-221ENST00000556707 CCDC141Q6ZP82 1450 aa38.11■■■■□ 3.69
SDR39U1-221ENST00000556707 RSPH4AQ5TD94 716 aa38.11■■■■□ 3.69
SDR39U1-221ENST00000556707 PTPN23Q9H3S7 1636 aa38.11■■■■□ 3.69
SDR39U1-221ENST00000556707 FGD6Q6ZV73 1430 aa38.11■■■■□ 3.69
SDR39U1-221ENST00000556707 ATP7AQ04656 1500 aa38.1■■■■□ 3.69
SDR39U1-221ENST00000556707 ARID4BQ4LE39 1312 aaPredicted RBP38.08■■■■□ 3.69
SDR39U1-221ENST00000556707 REREQ9P2R6 1566 aa38.06■■■■□ 3.68
SDR39U1-221ENST00000556707 BCORL1Q5H9F3 1711 aa38.05■■■■□ 3.68
SDR39U1-221ENST00000556707 PPARGC1BQ86YN6 1023 aaKnown RBP38.02■■■■□ 3.68
SDR39U1-221ENST00000556707 RTEL1-TNFRSF6BF6WH68 1400 aa38.02■■■■□ 3.68
SDR39U1-221ENST00000556707 TCOF1Q13428 1488 aaKnown RBP38.02■■■■□ 3.68
SDR39U1-221ENST00000556707 ADAMTSL3P82987 1691 aa37.99■■■■□ 3.67
SDR39U1-221ENST00000556707 TSPY4P0CV99 314 aa37.95■■■■□ 3.67
SDR39U1-221ENST00000556707 TSPY10P0CW01 314 aa37.95■■■■□ 3.67
SDR39U1-221ENST00000556707 AEBP2Q6ZN18 517 aaPredicted RBP37.95■■■■□ 3.67
SDR39U1-221ENST00000556707 ADGBQ8N7X0 1667 aa37.95■■■■□ 3.66
SDR39U1-221ENST00000556707 AGLP35573 1532 aa37.92■■■■□ 3.66
SDR39U1-221ENST00000556707 MAST1Q9Y2H9 1570 aa37.92■■■■□ 3.66
SDR39U1-221ENST00000556707 CROCC2H7BZ55 1655 aa37.89■■■■□ 3.66
SDR39U1-221ENST00000556707 DNMT1P26358 1616 aaKnown RBP37.89■■■■□ 3.66
SDR39U1-221ENST00000556707 A2MP01023 1474 aa37.89■■■■□ 3.66
SDR39U1-221ENST00000556707 PLXNC1O60486 1568 aa37.87■■■■□ 3.65
SDR39U1-221ENST00000556707 MADDQ8WXG6 1647 aa37.87■■■■□ 3.65
SDR39U1-221ENST00000556707 ABCC5O15440 1437 aa37.86■■■■□ 3.65
SDR39U1-221ENST00000556707 MLECQ14165 292 aa37.85■■■■□ 3.65
SDR39U1-221ENST00000556707 DAPK1P53355 1430 aa37.84■■■■□ 3.65
SDR39U1-221ENST00000556707 SHANK2Q9UPX8 1470 aa37.83■■■■□ 3.65
SDR39U1-221ENST00000556707 FAM50AQ14320 339 aaKnown RBP37.82■■■■□ 3.64
SDR39U1-221ENST00000556707 FER1L4A9Z1Z3 1794 aa37.8■■■■□ 3.64
SDR39U1-221ENST00000556707 RIMS1Q86UR5 1692 aaKnown RBP37.78■■■■□ 3.64
SDR39U1-221ENST00000556707 DHX29Q7Z478 1369 aaKnown RBP37.78■■■■□ 3.64
SDR39U1-221ENST00000556707 PTPRMP28827 1452 aa37.72■■■■□ 3.63
SDR39U1-221ENST00000556707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.68■■■■□ 3.62
SDR39U1-221ENST00000556707 RRBP1Q9P2E9 1410 aaKnown RBP37.64■■■■□ 3.62
SDR39U1-221ENST00000556707 DUOX2Q9NRD8 1548 aa37.63■■■■□ 3.61
SDR39U1-221ENST00000556707 CHIC2Q9UKJ5 165 aa37.63■■■■□ 3.61
SDR39U1-221ENST00000556707 KIF15Q9NS87 1388 aa37.62■■■■□ 3.61
SDR39U1-221ENST00000556707 ANKRD30AQ9BXX3 1397 aa37.61■■■■□ 3.61
SDR39U1-221ENST00000556707 ADGRL2O95490 1459 aa37.6■■■■□ 3.61
SDR39U1-221ENST00000556707 KIF3BO15066 747 aa37.6■■■■□ 3.61
SDR39U1-221ENST00000556707 RRP7BPQ9NSQ0 103 aa37.59■■■■□ 3.61
SDR39U1-221ENST00000556707 EIF2AK4Q9P2K8 1649 aaKnown RBP37.58■■■■□ 3.61
SDR39U1-221ENST00000556707 GGT6Q6P531 493 aa37.58■■■■□ 3.61
SDR39U1-221ENST00000556707 NCOA1Q15788 1441 aa37.58■■■■□ 3.61
SDR39U1-221ENST00000556707 ESF1Q9H501 851 aaKnown RBP37.57■■■■□ 3.6
SDR39U1-221ENST00000556707 PTPRKQ15262 1439 aa37.56■■■■□ 3.6
SDR39U1-221ENST00000556707 CNTLNQ9NXG0 1405 aa37.55■■■■□ 3.6
SDR39U1-221ENST00000556707 PPP6R1Q9UPN7 881 aa37.53■■■■□ 3.6
SDR39U1-221ENST00000556707 RNF17Q9BXT8 1623 aaKnown RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms