RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CDC42BPAQ5VT25 1732 aa12.09□□□□□ -0.47
PCNX4-210ENST00000555740 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-210ENST00000555740 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
PCNX4-210ENST00000555740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-210ENST00000555740 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
PCNX4-210ENST00000555740 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.48
PCNX4-210ENST00000555740 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
PCNX4-210ENST00000555740 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
PCNX4-210ENST00000555740 TTC37Q6PGP7 1564 aa12.07□□□□□ -0.48
PCNX4-210ENST00000555740 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
PCNX4-210ENST00000555740 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
PCNX4-210ENST00000555740 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
PCNX4-210ENST00000555740 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
PCNX4-210ENST00000555740 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
PCNX4-210ENST00000555740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCNX4-210ENST00000555740 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
PCNX4-210ENST00000555740 GLI2P10070 1586 aa12.04□□□□□ -0.48
PCNX4-210ENST00000555740 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
PCNX4-210ENST00000555740 TTBK1Q5TCY1 1321 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-210ENST00000555740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCNX4-210ENST00000555740 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
PCNX4-210ENST00000555740 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
PCNX4-210ENST00000555740 PTPN23Q9H3S7 1636 aa12.03□□□□□ -0.48
PCNX4-210ENST00000555740 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
PCNX4-210ENST00000555740 ATP1B4Q9UN42 357 aaPredicted RBP12.02□□□□□ -0.48
PCNX4-210ENST00000555740 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.48
PCNX4-210ENST00000555740 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
PCNX4-210ENST00000555740 DIP2BQ9P265 1576 aa12□□□□□ -0.49
PCNX4-210ENST00000555740 MAP3K4Q9Y6R4 1608 aa12□□□□□ -0.49
PCNX4-210ENST00000555740 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
PCNX4-210ENST00000555740 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
PCNX4-210ENST00000555740 PLEKHD1A6NEE1 506 aa11.99□□□□□ -0.49
PCNX4-210ENST00000555740 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
PCNX4-210ENST00000555740 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
PCNX4-210ENST00000555740 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
PCNX4-210ENST00000555740 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
PCNX4-210ENST00000555740 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
PCNX4-210ENST00000555740 KIF13AQ9H1H9 1805 aa11.96□□□□□ -0.49
PCNX4-210ENST00000555740 ARID3CA6NKF2 412 aa11.96□□□□□ -0.49
PCNX4-210ENST00000555740 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
PCNX4-210ENST00000555740 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.49
PCNX4-210ENST00000555740 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-210ENST00000555740 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
PCNX4-210ENST00000555740 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
PCNX4-210ENST00000555740 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
PCNX4-210ENST00000555740 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
PCNX4-210ENST00000555740 PLCH2O75038 1416 aa11.94□□□□□ -0.5
PCNX4-210ENST00000555740 ABCC1P33527 1531 aa11.93□□□□□ -0.5
PCNX4-210ENST00000555740 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
PCNX4-210ENST00000555740 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
PCNX4-210ENST00000555740 PPRC1Q5VV67 1664 aaKnown RBP11.93□□□□□ -0.5
PCNX4-210ENST00000555740 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
PCNX4-210ENST00000555740 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCNX4-210ENST00000555740 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
PCNX4-210ENST00000555740 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
PCNX4-210ENST00000555740 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
PCNX4-210ENST00000555740 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
PCNX4-210ENST00000555740 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
PCNX4-210ENST00000555740 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-210ENST00000555740 KIAA1107Q9UPP5 1409 aa11.9□□□□□ -0.51
PCNX4-210ENST00000555740 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
PCNX4-210ENST00000555740 NEO1Q92859 1461 aa11.88□□□□□ -0.51
PCNX4-210ENST00000555740 PROM2Q8N271 834 aa11.88□□□□□ -0.51
PCNX4-210ENST00000555740 MBD5Q9P267 1494 aa11.87□□□□□ -0.51
PCNX4-210ENST00000555740 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
PCNX4-210ENST00000555740 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
PCNX4-210ENST00000555740 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
PCNX4-210ENST00000555740 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
PCNX4-210ENST00000555740 DAPK1P53355 1430 aa11.86□□□□□ -0.51
PCNX4-210ENST00000555740 PKD2Q13563 968 aa11.86□□□□□ -0.51
PCNX4-210ENST00000555740 PLXNC1O60486 1568 aa11.86□□□□□ -0.51
PCNX4-210ENST00000555740 FANCAO15360 1455 aa11.85□□□□□ -0.51
PCNX4-210ENST00000555740 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
PCNX4-210ENST00000555740 POLA2Q14181 598 aa11.85□□□□□ -0.51
PCNX4-210ENST00000555740 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
PCNX4-210ENST00000555740 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
PCNX4-210ENST00000555740 ABCC5O15440 1437 aa11.84□□□□□ -0.51
PCNX4-210ENST00000555740 KDM5CP41229 1560 aa11.84□□□□□ -0.51
PCNX4-210ENST00000555740 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
PCNX4-210ENST00000555740 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
PCNX4-210ENST00000555740 RICTORQ6R327 1708 aa11.83□□□□□ -0.52
PCNX4-210ENST00000555740 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
PCNX4-210ENST00000555740 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
PCNX4-210ENST00000555740 ROCK1Q13464 1354 aa11.83□□□□□ -0.52
PCNX4-210ENST00000555740 ZFYVE16Q7Z3T8 1539 aa11.81□□□□□ -0.52
PCNX4-210ENST00000555740 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
PCNX4-210ENST00000555740 ADGRL1O94910 1474 aa11.81□□□□□ -0.52
PCNX4-210ENST00000555740 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
PCNX4-210ENST00000555740 HFM1A2PYH4 1435 aa11.81□□□□□ -0.52
PCNX4-210ENST00000555740 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
PCNX4-210ENST00000555740 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
PCNX4-210ENST00000555740 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
PCNX4-210ENST00000555740 TSPOAP1O95153 1857 aa11.78□□□□□ -0.52
PCNX4-210ENST00000555740 C9orf84Q5VXU9 1444 aa11.78□□□□□ -0.52
PCNX4-210ENST00000555740 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
PCNX4-210ENST00000555740 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
PCNX4-210ENST00000555740 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
PCNX4-210ENST00000555740 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
PCNX4-210ENST00000555740 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
PCNX4-210ENST00000555740 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms