RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
NEK9-206ENST00000555537 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
NEK9-206ENST00000555537 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
NEK9-206ENST00000555537 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
NEK9-206ENST00000555537 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
NEK9-206ENST00000555537 SOCS7O14512 581 aa14.12□□□□□ -0.15
NEK9-206ENST00000555537 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
NEK9-206ENST00000555537 PLCH2O75038 1416 aa14.12□□□□□ -0.15
NEK9-206ENST00000555537 ATP10AO60312 1499 aa14.12□□□□□ -0.15
NEK9-206ENST00000555537 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
NEK9-206ENST00000555537 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
NEK9-206ENST00000555537 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
NEK9-206ENST00000555537 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
NEK9-206ENST00000555537 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
NEK9-206ENST00000555537 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
NEK9-206ENST00000555537 C9orf84Q5VXU9 1444 aa14.07□□□□□ -0.16
NEK9-206ENST00000555537 PREX1Q8TCU6 1659 aa14.07□□□□□ -0.16
NEK9-206ENST00000555537 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
NEK9-206ENST00000555537 EEA1Q15075 1411 aa14□□□□□ -0.17
NEK9-206ENST00000555537 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
NEK9-206ENST00000555537 CDK11AQ9UQ88 783 aaPredicted RBP14□□□□□ -0.17
NEK9-206ENST00000555537 KIF14Q15058 1648 aa14□□□□□ -0.17
NEK9-206ENST00000555537 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
NEK9-206ENST00000555537 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
NEK9-206ENST00000555537 ZNF518AQ6AHZ1 1483 aa13.99□□□□□ -0.17
NEK9-206ENST00000555537 PTPRTO14522 1441 aa13.98□□□□□ -0.17
NEK9-206ENST00000555537 ARHGAP5Q13017 1502 aa13.98□□□□□ -0.17
NEK9-206ENST00000555537 SETD1BQ9UPS6 1966 aaKnown RBP13.97□□□□□ -0.17
NEK9-206ENST00000555537 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.17
NEK9-206ENST00000555537 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.17
NEK9-206ENST00000555537 C3P01024 1663 aa13.96□□□□□ -0.17
NEK9-206ENST00000555537 LTBP4Q8N2S1 1624 aa13.96□□□□□ -0.17
NEK9-206ENST00000555537 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
NEK9-206ENST00000555537 KDM5CP41229 1560 aa13.95□□□□□ -0.18
NEK9-206ENST00000555537 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
NEK9-206ENST00000555537 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
NEK9-206ENST00000555537 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
NEK9-206ENST00000555537 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
NEK9-206ENST00000555537 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
NEK9-206ENST00000555537 MLH3Q9UHC1 1453 aa13.92□□□□□ -0.18
NEK9-206ENST00000555537 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
NEK9-206ENST00000555537 ZNF335Q9H4Z2 1342 aaPredicted RBP13.9□□□□□ -0.18
NEK9-206ENST00000555537 NCOA1Q15788 1441 aa13.9□□□□□ -0.18
NEK9-206ENST00000555537 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
NEK9-206ENST00000555537 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
NEK9-206ENST00000555537 CLIP1P30622 1438 aa13.9□□□□□ -0.19
NEK9-206ENST00000555537 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
NEK9-206ENST00000555537 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
NEK9-206ENST00000555537 ZMYM3Q14202 1370 aa13.88□□□□□ -0.19
NEK9-206ENST00000555537 CAMSAP1Q5T5Y3 1602 aa13.88□□□□□ -0.19
NEK9-206ENST00000555537 AGLP35573 1532 aa13.88□□□□□ -0.19
NEK9-206ENST00000555537 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
NEK9-206ENST00000555537 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
NEK9-206ENST00000555537 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
NEK9-206ENST00000555537 ABCC1P33527 1531 aa13.85□□□□□ -0.19
NEK9-206ENST00000555537 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
NEK9-206ENST00000555537 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
NEK9-206ENST00000555537 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
NEK9-206ENST00000555537 GGT6Q6P531 493 aa13.82□□□□□ -0.2
NEK9-206ENST00000555537 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
NEK9-206ENST00000555537 NPATQ14207 1427 aa13.81□□□□□ -0.2
NEK9-206ENST00000555537 SUPT6HQ7KZ85 1726 aaKnown RBP13.81□□□□□ -0.2
NEK9-206ENST00000555537 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
NEK9-206ENST00000555537 PKD2Q13563 968 aa13.8□□□□□ -0.2
NEK9-206ENST00000555537 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
NEK9-206ENST00000555537 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
NEK9-206ENST00000555537 CDC42BPAQ5VT25 1732 aa13.79□□□□□ -0.2
NEK9-206ENST00000555537 HSPA1LP34931 641 aa13.79□□□□□ -0.2
NEK9-206ENST00000555537 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
NEK9-206ENST00000555537 MROH2AA6NES4 1674 aa13.77□□□□□ -0.21
NEK9-206ENST00000555537 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
NEK9-206ENST00000555537 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.21
NEK9-206ENST00000555537 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
NEK9-206ENST00000555537 SYCP2Q9BX26 1530 aa13.76□□□□□ -0.21
NEK9-206ENST00000555537 GPATCH8Q9UKJ3 1502 aaKnown RBP13.75□□□□□ -0.21
NEK9-206ENST00000555537 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
NEK9-206ENST00000555537 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
NEK9-206ENST00000555537 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
NEK9-206ENST00000555537 MYO3AQ8NEV4 1616 aa13.74□□□□□ -0.21
NEK9-206ENST00000555537 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
NEK9-206ENST00000555537 A2MP01023 1474 aa13.74□□□□□ -0.21
NEK9-206ENST00000555537 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
NEK9-206ENST00000555537 ZNF644Q9H582 1327 aaPredicted RBP13.72□□□□□ -0.21
NEK9-206ENST00000555537 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
NEK9-206ENST00000555537 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
NEK9-206ENST00000555537 TOM1O60784 492 aa13.71□□□□□ -0.21
NEK9-206ENST00000555537 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
NEK9-206ENST00000555537 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
NEK9-206ENST00000555537 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.21
NEK9-206ENST00000555537 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
NEK9-206ENST00000555537 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
NEK9-206ENST00000555537 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
NEK9-206ENST00000555537 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
NEK9-206ENST00000555537 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
NEK9-206ENST00000555537 CCNB3Q8WWL7 1395 aa13.68□□□□□ -0.22
NEK9-206ENST00000555537 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
NEK9-206ENST00000555537 FYCO1Q9BQS8 1478 aa13.66□□□□□ -0.22
NEK9-206ENST00000555537 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
NEK9-206ENST00000555537 KIF3BO15066 747 aa13.65□□□□□ -0.22
NEK9-206ENST00000555537 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms