RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 HFM1A2PYH4 1435 aa34.19■■■■□ 3.06
STRN3-207ENST00000555358 CFDP1Q9UEE9 299 aaPredicted RBP34.19■■■■□ 3.06
STRN3-207ENST00000555358 CHIC2Q9UKJ5 165 aa34.19■■■■□ 3.06
STRN3-207ENST00000555358 MAPKBP1O60336 1514 aa34.18■■■■□ 3.06
STRN3-207ENST00000555358 UHRF1BP1LA0JNW5 1464 aa34.17■■■■□ 3.06
STRN3-207ENST00000555358 NAIPQ13075 1403 aa34.15■■■■□ 3.06
STRN3-207ENST00000555358 ZCCHC11Q5TAX3 1644 aaKnown RBP34.14■■■■□ 3.06
STRN3-207ENST00000555358 CAMSAP2Q08AD1 1489 aa34.14■■■■□ 3.06
STRN3-207ENST00000555358 ZNF777Q9ULD5 760 aaPredicted RBP34.12■■■■□ 3.05
STRN3-207ENST00000555358 DNMT1P26358 1616 aaKnown RBP34.12■■■■□ 3.05
STRN3-207ENST00000555358 DAPK1P53355 1430 aa34.12■■■■□ 3.05
STRN3-207ENST00000555358 RRP7BPQ9NSQ0 103 aa34.11■■■■□ 3.05
STRN3-207ENST00000555358 KDM5BQ9UGL1 1544 aa34.1■■■■□ 3.05
STRN3-207ENST00000555358 ABCC5O15440 1437 aa34.1■■■■□ 3.05
STRN3-207ENST00000555358 GCC2Q8IWJ2 1684 aa34.04■■■■□ 3.04
STRN3-207ENST00000555358 TTC37Q6PGP7 1564 aa34.02■■■■□ 3.04
STRN3-207ENST00000555358 AKNAQ7Z591 1439 aa34■■■■□ 3.03
STRN3-207ENST00000555358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34■■■■□ 3.03
STRN3-207ENST00000555358 CDC42BPBQ9Y5S2 1711 aa34■■■■□ 3.03
STRN3-207ENST00000555358 KCNH8Q96L42 1107 aa33.99■■■■□ 3.03
STRN3-207ENST00000555358 PREX2Q70Z35 1606 aa33.98■■■■□ 3.03
STRN3-207ENST00000555358 KDM6BO15054 1643 aa33.97■■■■□ 3.03
STRN3-207ENST00000555358 ROCK1Q13464 1354 aa33.93■■■■□ 3.02
STRN3-207ENST00000555358 CROCC2H7BZ55 1655 aa33.93■■■■□ 3.02
STRN3-207ENST00000555358 SAMD9LQ8IVG5 1584 aa33.88■■■■□ 3.01
STRN3-207ENST00000555358 MYO5CQ9NQX4 1742 aa33.88■■■■□ 3.01
STRN3-207ENST00000555358 ADGBQ8N7X0 1667 aa33.85■■■■□ 3.01
STRN3-207ENST00000555358 ARHGAP5Q13017 1502 aa33.84■■■■□ 3.01
STRN3-207ENST00000555358 HNRNPMP52272 730 aaKnown RBP eCLIP33.84■■■■□ 3.014e-7■■■■■ 29.8
STRN3-207ENST00000555358 SUPT16HQ9Y5B9 1047 aaKnown RBP33.84■■■■□ 3.01
STRN3-207ENST00000555358 NCOA1Q15788 1441 aa33.81■■■■□ 3
STRN3-207ENST00000555358 MYT1Q01538 1121 aa33.8■■■■□ 3
STRN3-207ENST00000555358 SIN3AQ96ST3 1273 aa33.8■■■■□ 3
STRN3-207ENST00000555358 MBD5Q9P267 1494 aa33.8■■■■□ 3
STRN3-207ENST00000555358 ADGRL2O95490 1459 aa33.79■■■■□ 3
STRN3-207ENST00000555358 WDR7Q9Y4E6 1490 aa33.79■■■■□ 3
STRN3-207ENST00000555358 ARHGEF5Q12774 1597 aa33.77■■■■□ 3
STRN3-207ENST00000555358 TRIM52Q96A61 297 aa33.76■■■■□ 3
STRN3-207ENST00000555358 C9orf84Q5VXU9 1444 aa33.74■■■□□ 2.99
STRN3-207ENST00000555358 SHANK2Q9UPX8 1470 aa33.74■■■□□ 2.99
STRN3-207ENST00000555358 PLCH2O75038 1416 aa33.74■■■□□ 2.99
STRN3-207ENST00000555358 SYCP2Q9BX26 1530 aa33.73■■■□□ 2.99
STRN3-207ENST00000555358 ANKRD30AQ9BXX3 1397 aa33.71■■■□□ 2.99
STRN3-207ENST00000555358 ASXL2Q76L83 1435 aa33.71■■■□□ 2.99
STRN3-207ENST00000555358 TIMELESSQ9UNS1 1208 aa33.69■■■□□ 2.98
STRN3-207ENST00000555358 DENND4BO75064 1496 aaPredicted RBP33.69■■■□□ 2.98
STRN3-207ENST00000555358 CCDC141Q6ZP82 1450 aa33.69■■■□□ 2.98
STRN3-207ENST00000555358 TSPY4P0CV99 314 aa33.69■■■□□ 2.98
STRN3-207ENST00000555358 TSPY10P0CW01 314 aa33.69■■■□□ 2.98
STRN3-207ENST00000555358 NPM1P06748 294 aaKnown RBP eCLIP33.64■■■□□ 2.98
STRN3-207ENST00000555358 ARHGEF12Q9NZN5 1544 aa33.63■■■□□ 2.97
STRN3-207ENST00000555358 EFCAB2Q5VUJ9 269 aa33.62■■■□□ 2.97
STRN3-207ENST00000555358 MPHOSPH9Q99550 1183 aa33.62■■■□□ 2.97
STRN3-207ENST00000555358 ABCA9Q8IUA7 1624 aa33.61■■■□□ 2.97
STRN3-207ENST00000555358 KIAA1107Q9UPP5 1409 aa33.61■■■□□ 2.97
STRN3-207ENST00000555358 RSPH4AQ5TD94 716 aa33.6■■■□□ 2.97
STRN3-207ENST00000555358 PLEKHH2Q8IVE3 1493 aa33.6■■■□□ 2.97
STRN3-207ENST00000555358 ANKRD50Q9ULJ7 1429 aa33.59■■■□□ 2.97
STRN3-207ENST00000555358 DDX10Q13206 875 aaKnown RBP33.56■■■□□ 2.96
STRN3-207ENST00000555358 PPP1R15AO75807 674 aaPredicted RBP33.56■■■□□ 2.96
STRN3-207ENST00000555358 KIF15Q9NS87 1388 aa33.56■■■□□ 2.96
STRN3-207ENST00000555358 ABCC1P33527 1531 aa33.55■■■□□ 2.96
STRN3-207ENST00000555358 ARAP3Q8WWN8 1544 aa33.55■■■□□ 2.96
STRN3-207ENST00000555358 RIMBP3CA6NJZ7 1639 aa33.54■■■□□ 2.96
STRN3-207ENST00000555358 RIMBP3BA6NNM3 1639 aa33.54■■■□□ 2.96
STRN3-207ENST00000555358 RIMBP3Q9UFD9 1639 aa33.54■■■□□ 2.96
STRN3-207ENST00000555358 FOXD1Q16676 465 aa33.53■■■□□ 2.96
STRN3-207ENST00000555358 MAST1Q9Y2H9 1570 aa33.52■■■□□ 2.96
STRN3-207ENST00000555358 CYB5RLQ6IPT4 315 aa33.51■■■□□ 2.96
STRN3-207ENST00000555358 PZPP20742 1482 aa33.49■■■□□ 2.95
STRN3-207ENST00000555358 TRAPPC8Q9Y2L5 1435 aa33.48■■■□□ 2.95
STRN3-207ENST00000555358 SLC4A1APQ9BWU0 796 aaKnown RBP33.48■■■□□ 2.95
STRN3-207ENST00000555358 FANCAO15360 1455 aa33.47■■■□□ 2.95
STRN3-207ENST00000555358 TONSLQ96HA7 1378 aa33.41■■■□□ 2.94
STRN3-207ENST00000555358 PLXNC1O60486 1568 aa33.4■■■□□ 2.94
STRN3-207ENST00000555358 AFAP1Q8N556 730 aa33.38■■■□□ 2.93
STRN3-207ENST00000555358 ANKRD30BQ9BXX2 1392 aa33.36■■■□□ 2.93
STRN3-207ENST00000555358 NUP155O75694 1391 aa33.36■■■□□ 2.93
STRN3-207ENST00000555358 HIRIP3Q9BW71 556 aaPredicted RBP33.36■■■□□ 2.93
STRN3-207ENST00000555358 TSHZ2Q9NRE2 1034 aa33.33■■■□□ 2.93
STRN3-207ENST00000555358 ADGRL1O94910 1474 aa33.33■■■□□ 2.93
STRN3-207ENST00000555358 CCER2I3L3R5 266 aa33.33■■■□□ 2.93
STRN3-207ENST00000555358 CD109Q6YHK3 1445 aa33.32■■■□□ 2.92
STRN3-207ENST00000555358 KDM5DQ9BY66 1539 aa33.3■■■□□ 2.92
STRN3-207ENST00000555358 SCAPERQ9BY12 1400 aa33.3■■■□□ 2.92
STRN3-207ENST00000555358 SPAG9O60271 1321 aaKnown RBP33.29■■■□□ 2.92
STRN3-207ENST00000555358 PKD2Q13563 968 aa33.29■■■□□ 2.92
STRN3-207ENST00000555358 DUOX2Q9NRD8 1548 aa33.28■■■□□ 2.92
STRN3-207ENST00000555358 ZFYVE16Q7Z3T8 1539 aa33.27■■■□□ 2.92
STRN3-207ENST00000555358 ANP32CO43423 234 aa33.23■■■□□ 2.91
STRN3-207ENST00000555358 RTEL1-TNFRSF6BF6WH68 1400 aa33.23■■■□□ 2.91
STRN3-207ENST00000555358 RPRD2Q5VT52 1461 aaKnown RBP33.22■■■□□ 2.91
STRN3-207ENST00000555358 UNC13BO14795 1591 aa33.21■■■□□ 2.91
STRN3-207ENST00000555358 INO80Q9ULG1 1556 aaPredicted RBP33.2■■■□□ 2.9
STRN3-207ENST00000555358 ERBINQ96RT1 1412 aa33.19■■■□□ 2.9
STRN3-207ENST00000555358 ATP7AQ04656 1500 aa33.19■■■□□ 2.9
STRN3-207ENST00000555358 FAM135AQ9P2D6 1515 aa33.19■■■□□ 2.9
STRN3-207ENST00000555358 CFAP74Q9C0B2 1584 aa33.17■■■□□ 2.9
STRN3-207ENST00000555358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.17■■■□□ 2.96e-13■□□□□ 9.9
STRN3-207ENST00000555358 FKBP8Q14318 412 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms