RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
LINC01578-205ENST00000555227 STK25O00506 426 aa14.08□□□□□ -0.16
LINC01578-205ENST00000555227 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
LINC01578-205ENST00000555227 VARS2Q5ST30 1063 aaKnown RBP14.06□□□□□ -0.16
LINC01578-205ENST00000555227 MICALL2Q8IY33 904 aa14.06□□□□□ -0.16
LINC01578-205ENST00000555227 RGL2O15211 777 aa14.04□□□□□ -0.16
LINC01578-205ENST00000555227 NLRP6P59044 892 aa14.01□□□□□ -0.17
LINC01578-205ENST00000555227 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
LINC01578-205ENST00000555227 ZNF687Q8N1G0 1237 aa14□□□□□ -0.17
LINC01578-205ENST00000555227 MYT1LQ9UL68 1186 aa14□□□□□ -0.17
LINC01578-205ENST00000555227 PTGER2P43116 358 aa13.99□□□□□ -0.17
LINC01578-205ENST00000555227 TMEM92Q6UXU6 159 aa13.99□□□□□ -0.17
LINC01578-205ENST00000555227 GPR153Q6NV75 609 aa13.96□□□□□ -0.17
LINC01578-205ENST00000555227 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
LINC01578-205ENST00000555227 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
LINC01578-205ENST00000555227 MFRPQ9BY79 579 aa13.87□□□□□ -0.19
LINC01578-205ENST00000555227 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
LINC01578-205ENST00000555227 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
LINC01578-205ENST00000555227 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
LINC01578-205ENST00000555227 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
LINC01578-205ENST00000555227 LSM11P83369 360 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01578-205ENST00000555227 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
LINC01578-205ENST00000555227 PBX2P40425 430 aa13.73□□□□□ -0.21
LINC01578-205ENST00000555227 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC01578-205ENST00000555227 KIF3CO14782 793 aa13.67□□□□□ -0.22
LINC01578-205ENST00000555227 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
LINC01578-205ENST00000555227 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
LINC01578-205ENST00000555227 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
LINC01578-205ENST00000555227 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
LINC01578-205ENST00000555227 SLC34A2O95436 690 aa13.62□□□□□ -0.23
LINC01578-205ENST00000555227 NUDT7P0C024 238 aa13.62□□□□□ -0.23
LINC01578-205ENST00000555227 PPP1R37O75864 691 aa13.61□□□□□ -0.23
LINC01578-205ENST00000555227 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
LINC01578-205ENST00000555227 LHX6Q9UPM6 363 aa13.57□□□□□ -0.24
LINC01578-205ENST00000555227 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
LINC01578-205ENST00000555227 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
LINC01578-205ENST00000555227 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
LINC01578-205ENST00000555227 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
LINC01578-205ENST00000555227 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
LINC01578-205ENST00000555227 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
LINC01578-205ENST00000555227 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
LINC01578-205ENST00000555227 ADGRD1Q6QNK2 874 aa13.48□□□□□ -0.25
LINC01578-205ENST00000555227 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
LINC01578-205ENST00000555227 TK2O00142 265 aa13.44□□□□□ -0.26
LINC01578-205ENST00000555227 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
LINC01578-205ENST00000555227 FOXK1P85037 733 aa13.42□□□□□ -0.26
LINC01578-205ENST00000555227 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
LINC01578-205ENST00000555227 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
LINC01578-205ENST00000555227 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
LINC01578-205ENST00000555227 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
LINC01578-205ENST00000555227 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
LINC01578-205ENST00000555227 HRO43593 1189 aa13.36□□□□□ -0.27
LINC01578-205ENST00000555227 TBC1D12O60347 775 aa13.36□□□□□ -0.27
LINC01578-205ENST00000555227 DSG2Q14126 1118 aa13.36□□□□□ -0.27
LINC01578-205ENST00000555227 PDE4AP27815 886 aa13.33□□□□□ -0.28
LINC01578-205ENST00000555227 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
LINC01578-205ENST00000555227 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
LINC01578-205ENST00000555227 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
LINC01578-205ENST00000555227 PSEN2P49810 448 aa13.29□□□□□ -0.28
LINC01578-205ENST00000555227 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
LINC01578-205ENST00000555227 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
LINC01578-205ENST00000555227 KCTD12Q96CX2 325 aaKnown RBP13.26□□□□□ -0.29
LINC01578-205ENST00000555227 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
LINC01578-205ENST00000555227 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
LINC01578-205ENST00000555227 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01578-205ENST00000555227 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
LINC01578-205ENST00000555227 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
LINC01578-205ENST00000555227 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
LINC01578-205ENST00000555227 KCNK17Q96T54 332 aa13.2□□□□□ -0.3
LINC01578-205ENST00000555227 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
LINC01578-205ENST00000555227 RGS20O76081 388 aa13.19□□□□□ -0.3
LINC01578-205ENST00000555227 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.19□□□□□ -0.3
LINC01578-205ENST00000555227 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
LINC01578-205ENST00000555227 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
LINC01578-205ENST00000555227 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
LINC01578-205ENST00000555227 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
LINC01578-205ENST00000555227 MFSD10Q14728 455 aa13.13□□□□□ -0.31
LINC01578-205ENST00000555227 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
LINC01578-205ENST00000555227 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
LINC01578-205ENST00000555227 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
LINC01578-205ENST00000555227 PTPN5P54829 565 aa13.08□□□□□ -0.32
LINC01578-205ENST00000555227 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
LINC01578-205ENST00000555227 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
LINC01578-205ENST00000555227 EVI5O60447 810 aa13.06□□□□□ -0.32
LINC01578-205ENST00000555227 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
LINC01578-205ENST00000555227 A0A0G2JS52 829 aa13.03□□□□□ -0.32
LINC01578-205ENST00000555227 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
LINC01578-205ENST00000555227 PTPREP23469 700 aa13.02□□□□□ -0.33
LINC01578-205ENST00000555227 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
LINC01578-205ENST00000555227 FOSBP53539 338 aa13.01□□□□□ -0.33
LINC01578-205ENST00000555227 IRX2Q9BZI1 471 aaPredicted RBP13.01□□□□□ -0.33
LINC01578-205ENST00000555227 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
LINC01578-205ENST00000555227 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
LINC01578-205ENST00000555227 JPH4Q96JJ6 628 aa13□□□□□ -0.33
LINC01578-205ENST00000555227 WNT2BQ93097 391 aa12.99□□□□□ -0.33
LINC01578-205ENST00000555227 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
LINC01578-205ENST00000555227 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
LINC01578-205ENST00000555227 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
LINC01578-205ENST00000555227 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
LINC01578-205ENST00000555227 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms