RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 PLCH2O75038 1416 aa29.54■■■□□ 2.32
SDR39U1-210ENST00000555225 MADDQ8WXG6 1647 aa29.53■■■□□ 2.32
SDR39U1-210ENST00000555225 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
SDR39U1-210ENST00000555225 RAPGEF3O95398 923 aa29.51■■■□□ 2.31
SDR39U1-210ENST00000555225 ARHGEF40Q8TER5 1519 aa29.5■■■□□ 2.31
SDR39U1-210ENST00000555225 EFCAB2Q5VUJ9 269 aa29.48■■■□□ 2.31
SDR39U1-210ENST00000555225 FANCAO15360 1455 aa29.47■■■□□ 2.31
SDR39U1-210ENST00000555225 MYO5CQ9NQX4 1742 aa29.46■■■□□ 2.31
SDR39U1-210ENST00000555225 RICTORQ6R327 1708 aa29.45■■■□□ 2.31
SDR39U1-210ENST00000555225 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
SDR39U1-210ENST00000555225 CFAP74Q9C0B2 1584 aa29.44■■■□□ 2.3
SDR39U1-210ENST00000555225 CCNB3Q8WWL7 1395 aa29.44■■■□□ 2.3
SDR39U1-210ENST00000555225 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
SDR39U1-210ENST00000555225 AKNAQ7Z591 1439 aa29.41■■■□□ 2.3
SDR39U1-210ENST00000555225 RIMS1Q86UR5 1692 aaKnown RBP29.4■■■□□ 2.3
SDR39U1-210ENST00000555225 LMTK3Q96Q04 1460 aa29.4■■■□□ 2.3
SDR39U1-210ENST00000555225 ARHGAP5Q13017 1502 aa29.4■■■□□ 2.3
SDR39U1-210ENST00000555225 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
SDR39U1-210ENST00000555225 NCOA2Q15596 1464 aa29.39■■■□□ 2.3
SDR39U1-210ENST00000555225 SIGLEC1Q9BZZ2 1709 aa29.38■■■□□ 2.29
SDR39U1-210ENST00000555225 PREX2Q70Z35 1606 aa29.37■■■□□ 2.29
SDR39U1-210ENST00000555225 CFDP1Q9UEE9 299 aaPredicted RBP29.35■■■□□ 2.29
SDR39U1-210ENST00000555225 FBXO41Q8TF61 875 aa29.34■■■□□ 2.29
SDR39U1-210ENST00000555225 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
SDR39U1-210ENST00000555225 CDC42BPBQ9Y5S2 1711 aa29.33■■■□□ 2.29
SDR39U1-210ENST00000555225 DENND4BO75064 1496 aaPredicted RBP29.32■■■□□ 2.28
SDR39U1-210ENST00000555225 ZMYM4Q5VZL5 1548 aa29.31■■■□□ 2.28
SDR39U1-210ENST00000555225 ARID4BQ4LE39 1312 aaPredicted RBP29.29■■■□□ 2.28
SDR39U1-210ENST00000555225 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
SDR39U1-210ENST00000555225 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
SDR39U1-210ENST00000555225 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
SDR39U1-210ENST00000555225 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
SDR39U1-210ENST00000555225 YEATS2Q9ULM3 1422 aa29.24■■■□□ 2.27
SDR39U1-210ENST00000555225 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
SDR39U1-210ENST00000555225 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.26
SDR39U1-210ENST00000555225 KIAA1107Q9UPP5 1409 aa29.2■■■□□ 2.26
SDR39U1-210ENST00000555225 POGZQ7Z3K3 1410 aa29.19■■■□□ 2.26
SDR39U1-210ENST00000555225 ABCC1P33527 1531 aa29.18■■■□□ 2.26
SDR39U1-210ENST00000555225 MIA2Q96PC5 1412 aa29.18■■■□□ 2.26
SDR39U1-210ENST00000555225 SAMD9LQ8IVG5 1584 aa29.18■■■□□ 2.26
SDR39U1-210ENST00000555225 FER1L4A9Z1Z3 1794 aa29.17■■■□□ 2.26
SDR39U1-210ENST00000555225 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
SDR39U1-210ENST00000555225 ZNF644Q9H582 1327 aaPredicted RBP29.14■■■□□ 2.25
SDR39U1-210ENST00000555225 HNRNPMP52272 730 aaKnown RBP eCLIP29.13■■■□□ 2.25
SDR39U1-210ENST00000555225 AFAP1Q8N556 730 aa29.13■■■□□ 2.25
SDR39U1-210ENST00000555225 ARHGEF12Q9NZN5 1544 aa29.13■■■□□ 2.25
SDR39U1-210ENST00000555225 MAGI2Q86UL8 1455 aa29.11■■■□□ 2.25
SDR39U1-210ENST00000555225 HSPA2P54652 639 aa29.11■■■□□ 2.25
SDR39U1-210ENST00000555225 RSPH4AQ5TD94 716 aa29.11■■■□□ 2.25
SDR39U1-210ENST00000555225 TRAPPC8Q9Y2L5 1435 aa29.1■■■□□ 2.25
SDR39U1-210ENST00000555225 SYCP2Q9BX26 1530 aa29.09■■■□□ 2.25
SDR39U1-210ENST00000555225 CAMSAP2Q08AD1 1489 aa29.08■■■□□ 2.25
SDR39U1-210ENST00000555225 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
SDR39U1-210ENST00000555225 PLPPR3Q6T4P5 718 aa29.06■■■□□ 2.24
SDR39U1-210ENST00000555225 KDM5CP41229 1560 aa29.05■■■□□ 2.24
SDR39U1-210ENST00000555225 FGD6Q6ZV73 1430 aa29.05■■■□□ 2.24
SDR39U1-210ENST00000555225 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
SDR39U1-210ENST00000555225 MYT1LQ9UL68 1186 aa29.03■■■□□ 2.24
SDR39U1-210ENST00000555225 MLH3Q9UHC1 1453 aa29.02■■■□□ 2.24
SDR39U1-210ENST00000555225 SPAG9O60271 1321 aaKnown RBP29■■■□□ 2.23
SDR39U1-210ENST00000555225 MLECQ14165 292 aa29■■■□□ 2.23
SDR39U1-210ENST00000555225 PREX1Q8TCU6 1659 aa28.99■■■□□ 2.23
SDR39U1-210ENST00000555225 C9orf84Q5VXU9 1444 aa28.98■■■□□ 2.23
SDR39U1-210ENST00000555225 PTPN23Q9H3S7 1636 aa28.98■■■□□ 2.23
SDR39U1-210ENST00000555225 TCOF1Q13428 1488 aaKnown RBP28.97■■■□□ 2.23
SDR39U1-210ENST00000555225 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
SDR39U1-210ENST00000555225 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
SDR39U1-210ENST00000555225 TSPY4P0CV99 314 aa28.96■■■□□ 2.23
SDR39U1-210ENST00000555225 TSPY10P0CW01 314 aa28.96■■■□□ 2.23
SDR39U1-210ENST00000555225 ATP10AO60312 1499 aa28.96■■■□□ 2.23
SDR39U1-210ENST00000555225 RTEL1-TNFRSF6BF6WH68 1400 aa28.92■■■□□ 2.22
SDR39U1-210ENST00000555225 DIP2CQ9Y2E4 1556 aa28.89■■■□□ 2.22
SDR39U1-210ENST00000555225 FAM50AQ14320 339 aaKnown RBP28.89■■■□□ 2.22
SDR39U1-210ENST00000555225 ATP7AQ04656 1500 aa28.88■■■□□ 2.21
SDR39U1-210ENST00000555225 KIDINS220Q9ULH0 1771 aa28.87■■■□□ 2.21
SDR39U1-210ENST00000555225 STRCQ7RTU9 1775 aa28.86■■■□□ 2.21
SDR39U1-210ENST00000555225 ABCA6Q8N139 1617 aa28.86■■■□□ 2.21
SDR39U1-210ENST00000555225 INO80Q9ULG1 1556 aaPredicted RBP28.85■■■□□ 2.21
SDR39U1-210ENST00000555225 CERKQ8TCT0 537 aa28.85■■■□□ 2.21
SDR39U1-210ENST00000555225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.83■■■□□ 2.21
SDR39U1-210ENST00000555225 ABCC5O15440 1437 aa28.83■■■□□ 2.21
SDR39U1-210ENST00000555225 REREQ9P2R6 1566 aa28.82■■■□□ 2.2
SDR39U1-210ENST00000555225 DAPK1P53355 1430 aa28.81■■■□□ 2.2
SDR39U1-210ENST00000555225 CEBPAP49715 358 aaPredicted RBP28.81■■■□□ 2.2
SDR39U1-210ENST00000555225 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
SDR39U1-210ENST00000555225 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
SDR39U1-210ENST00000555225 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
SDR39U1-210ENST00000555225 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
SDR39U1-210ENST00000555225 C3P01024 1663 aa28.77■■■□□ 2.2
SDR39U1-210ENST00000555225 A2MP01023 1474 aa28.74■■■□□ 2.19
SDR39U1-210ENST00000555225 UHRF1BP1Q6BDS2 1440 aa28.74■■■□□ 2.19
SDR39U1-210ENST00000555225 ADGBQ8N7X0 1667 aa28.73■■■□□ 2.19
SDR39U1-210ENST00000555225 AGLP35573 1532 aa28.72■■■□□ 2.19
SDR39U1-210ENST00000555225 DHX29Q7Z478 1369 aaKnown RBP28.72■■■□□ 2.19
SDR39U1-210ENST00000555225 CROCC2H7BZ55 1655 aa28.71■■■□□ 2.19
SDR39U1-210ENST00000555225 ANKRD30AQ9BXX3 1397 aa28.69■■■□□ 2.18
SDR39U1-210ENST00000555225 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
SDR39U1-210ENST00000555225 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
SDR39U1-210ENST00000555225 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.18
SDR39U1-210ENST00000555225 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms