RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 ZNF687Q8N1G0 1237 aa7.92□□□□□ -1.14
KTN1-220ENST00000555172 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
KTN1-220ENST00000555172 PHF8Q9UPP1 1060 aa7.9□□□□□ -1.14
KTN1-220ENST00000555172 ANKRD13DQ6ZTN6 518 aa7.9□□□□□ -1.15
KTN1-220ENST00000555172 RNF25Q96BH1 459 aaPredicted RBP7.88□□□□□ -1.15
KTN1-220ENST00000555172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.87□□□□□ -1.15
KTN1-220ENST00000555172 ZFP91Q96JP5 570 aaPredicted RBP7.87□□□□□ -1.15
KTN1-220ENST00000555172 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
KTN1-220ENST00000555172 SOX12O15370 315 aa7.84□□□□□ -1.15
KTN1-220ENST00000555172 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
KTN1-220ENST00000555172 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
KTN1-220ENST00000555172 ZNF316A6NFI3 1004 aaPredicted RBP7.82□□□□□ -1.16
KTN1-220ENST00000555172 AXIN2Q9Y2T1 843 aa7.8□□□□□ -1.16
KTN1-220ENST00000555172 TRIM41Q8WV44 630 aa7.8□□□□□ -1.16
KTN1-220ENST00000555172 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
KTN1-220ENST00000555172 POTEEQ6S8J3 1075 aa7.79□□□□□ -1.16
KTN1-220ENST00000555172 NUDT7P0C024 238 aa7.78□□□□□ -1.16
KTN1-220ENST00000555172 VGFO15240 615 aaPredicted RBP7.77□□□□□ -1.17
KTN1-220ENST00000555172 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.17
KTN1-220ENST00000555172 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
KTN1-220ENST00000555172 C2orf72A6NCS6 295 aa7.75□□□□□ -1.17
KTN1-220ENST00000555172 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
KTN1-220ENST00000555172 BCL11BQ9C0K0 894 aaPredicted RBP7.74□□□□□ -1.17
KTN1-220ENST00000555172 LHX6Q9UPM6 363 aa7.74□□□□□ -1.17
KTN1-220ENST00000555172 NLRP6P59044 892 aa7.73□□□□□ -1.17
KTN1-220ENST00000555172 KIF3CO14782 793 aa7.72□□□□□ -1.17
KTN1-220ENST00000555172 MFRPQ9BY79 579 aa7.72□□□□□ -1.17
KTN1-220ENST00000555172 STK24Q9Y6E0 443 aa7.71□□□□□ -1.17
KTN1-220ENST00000555172 PCDHGA4Q9Y5G9 962 aa7.7□□□□□ -1.18
KTN1-220ENST00000555172 RGS20O76081 388 aa7.68□□□□□ -1.18
KTN1-220ENST00000555172 PBX2P40425 430 aa7.66□□□□□ -1.18
KTN1-220ENST00000555172 STK25O00506 426 aa7.64□□□□□ -1.19
KTN1-220ENST00000555172 ADGRD1Q6QNK2 874 aa7.64□□□□□ -1.19
KTN1-220ENST00000555172 PSEN2P49810 448 aa7.63□□□□□ -1.19
KTN1-220ENST00000555172 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
KTN1-220ENST00000555172 PPP1R37O75864 691 aa7.62□□□□□ -1.19
KTN1-220ENST00000555172 IRX2Q9BZI1 471 aaPredicted RBP7.62□□□□□ -1.19
KTN1-220ENST00000555172 SLC34A2O95436 690 aa7.62□□□□□ -1.19
KTN1-220ENST00000555172 ARHGAP33O14559 1287 aa7.61□□□□□ -1.19
KTN1-220ENST00000555172 TMC2Q8TDI7 906 aa7.61□□□□□ -1.19
KTN1-220ENST00000555172 DCAF8L2P0C7V8 631 aa7.59□□□□□ -1.2
KTN1-220ENST00000555172 KCTD12Q96CX2 325 aaKnown RBP7.59□□□□□ -1.2
KTN1-220ENST00000555172 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
KTN1-220ENST00000555172 HRO43593 1189 aa7.57□□□□□ -1.2
KTN1-220ENST00000555172 DAXXQ9UER7 740 aaPredicted RBP7.56□□□□□ -1.2
KTN1-220ENST00000555172 RGL2O15211 777 aa7.55□□□□□ -1.2
KTN1-220ENST00000555172 ECM2O94769 699 aaPredicted RBP7.55□□□□□ -1.2
KTN1-220ENST00000555172 TAOK2Q9UL54 1235 aa7.55□□□□□ -1.2
KTN1-220ENST00000555172 PLCB2Q00722 1185 aa7.54□□□□□ -1.2
KTN1-220ENST00000555172 TK2O00142 265 aa7.52□□□□□ -1.21
KTN1-220ENST00000555172 PTPN5P54829 565 aa7.52□□□□□ -1.21
KTN1-220ENST00000555172 PTCD2Q8WV60 388 aaKnown RBP7.52□□□□□ -1.21
KTN1-220ENST00000555172 PKD2Q13563 968 aa7.51□□□□□ -1.21
KTN1-220ENST00000555172 PLPP6Q8IY26 295 aa7.51□□□□□ -1.21
KTN1-220ENST00000555172 PSDA5PKW4 1024 aaPredicted RBP7.5□□□□□ -1.21
KTN1-220ENST00000555172 IFFO2Q5TF58 517 aa7.5□□□□□ -1.21
KTN1-220ENST00000555172 KCNK17Q96T54 332 aa7.5□□□□□ -1.21
KTN1-220ENST00000555172 DSG2Q14126 1118 aa7.48□□□□□ -1.21
KTN1-220ENST00000555172 PPP4R3BQ5MIZ7 849 aa7.48□□□□□ -1.21
KTN1-220ENST00000555172 STAC3Q96MF2 364 aa7.48□□□□□ -1.21
KTN1-220ENST00000555172 FOXK1P85037 733 aa7.47□□□□□ -1.21
KTN1-220ENST00000555172 VPS9D1Q9Y2B5 631 aa7.46□□□□□ -1.21
KTN1-220ENST00000555172 BCANQ96GW7 911 aa7.46□□□□□ -1.22
KTN1-220ENST00000555172 HAP1P54257 671 aaPredicted RBP7.45□□□□□ -1.22
KTN1-220ENST00000555172 UPF1Q92900 1129 aaKnown RBP eCLIP7.44□□□□□ -1.22
KTN1-220ENST00000555172 GPHNQ9NQX3 736 aaPredicted RBP7.44□□□□□ -1.22
KTN1-220ENST00000555172 TIMELESSQ9UNS1 1208 aa7.44□□□□□ -1.22
KTN1-220ENST00000555172 TPRNQ4KMQ1 711 aa7.42□□□□□ -1.22
KTN1-220ENST00000555172 ZNF454Q8N9F8 522 aa7.42□□□□□ -1.22
KTN1-220ENST00000555172 A0A0G2JS52 829 aa7.4□□□□□ -1.22
KTN1-220ENST00000555172 TBC1D12O60347 775 aa7.4□□□□□ -1.22
KTN1-220ENST00000555172 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
KTN1-220ENST00000555172 Q6ZNB5 142 aa7.4□□□□□ -1.23
KTN1-220ENST00000555172 THSD4Q6ZMP0 1018 aa7.39□□□□□ -1.23
KTN1-220ENST00000555172 OXER1Q8TDS5 423 aa7.39□□□□□ -1.23
KTN1-220ENST00000555172 BHMG1C9JSJ3 638 aaPredicted RBP7.38□□□□□ -1.23
KTN1-220ENST00000555172 BBXQ8WY36 941 aaPredicted RBP7.38□□□□□ -1.23
KTN1-220ENST00000555172 KCNH8Q96L42 1107 aa7.38□□□□□ -1.23
KTN1-220ENST00000555172 WNT2BQ93097 391 aa7.37□□□□□ -1.23
KTN1-220ENST00000555172 BCL2L12Q9HB09 334 aa7.36□□□□□ -1.23
KTN1-220ENST00000555172 TULP1O00294 542 aaPredicted RBP7.35□□□□□ -1.23
KTN1-220ENST00000555172 ZBED2Q9BTP6 218 aa7.35□□□□□ -1.23
KTN1-220ENST00000555172 GOLGA8CPA6NN73 597 aa7.35□□□□□ -1.23
KTN1-220ENST00000555172 VSIG10Q8N0Z9 540 aa7.35□□□□□ -1.23
KTN1-220ENST00000555172 FOSBP53539 338 aa7.34□□□□□ -1.23
KTN1-220ENST00000555172 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
KTN1-220ENST00000555172 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
KTN1-220ENST00000555172 PTPREP23469 700 aa7.33□□□□□ -1.24
KTN1-220ENST00000555172 ADAM33Q9BZ11 813 aa7.33□□□□□ -1.24
KTN1-220ENST00000555172 LAPTM4AQ15012 233 aa7.32□□□□□ -1.24
KTN1-220ENST00000555172 PAXIP1Q6ZW49 1069 aaPredicted RBP7.31□□□□□ -1.24
KTN1-220ENST00000555172 ARXQ96QS3 562 aa7.31□□□□□ -1.24
KTN1-220ENST00000555172 NKX1-1Q15270 411 aaPredicted RBP7.31□□□□□ -1.24
KTN1-220ENST00000555172 PPP1R15BQ5SWA1 713 aa7.3□□□□□ -1.24
KTN1-220ENST00000555172 HS6ST3Q8IZP7 471 aa7.3□□□□□ -1.24
KTN1-220ENST00000555172 CFAP44Q96MT7 982 aa7.3□□□□□ -1.24
KTN1-220ENST00000555172 CHGAP10645 457 aaKnown RBP7.29□□□□□ -1.24
KTN1-220ENST00000555172 CRISPLD2Q9H0B8 497 aa7.29□□□□□ -1.24
KTN1-220ENST00000555172 EVI5O60447 810 aa7.28□□□□□ -1.24
KTN1-220ENST00000555172 PROX2Q3B8N5 592 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms