RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 NEO1Q92859 1461 aa18.71■□□□□ 0.59
ACTN1-214ENST00000555075 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
ACTN1-214ENST00000555075 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
ACTN1-214ENST00000555075 ARAP3Q8WWN8 1544 aa18.7■□□□□ 0.58
ACTN1-214ENST00000555075 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
ACTN1-214ENST00000555075 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
ACTN1-214ENST00000555075 AKNAQ7Z591 1439 aa18.68■□□□□ 0.58
ACTN1-214ENST00000555075 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
ACTN1-214ENST00000555075 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
ACTN1-214ENST00000555075 DENND4BO75064 1496 aaPredicted RBP18.64■□□□□ 0.57
ACTN1-214ENST00000555075 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
ACTN1-214ENST00000555075 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
ACTN1-214ENST00000555075 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
ACTN1-214ENST00000555075 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
ACTN1-214ENST00000555075 ITSN2Q9NZM3 1697 aa18.61■□□□□ 0.57
ACTN1-214ENST00000555075 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
ACTN1-214ENST00000555075 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
ACTN1-214ENST00000555075 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
ACTN1-214ENST00000555075 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.56
ACTN1-214ENST00000555075 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
ACTN1-214ENST00000555075 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
ACTN1-214ENST00000555075 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
ACTN1-214ENST00000555075 POGZQ7Z3K3 1410 aa18.53■□□□□ 0.56
ACTN1-214ENST00000555075 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.56
ACTN1-214ENST00000555075 RICTORQ6R327 1708 aa18.52■□□□□ 0.56
ACTN1-214ENST00000555075 AFAP1Q8N556 730 aa18.52■□□□□ 0.56
ACTN1-214ENST00000555075 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-214ENST00000555075 ABCC1P33527 1531 aa18.5■□□□□ 0.55
ACTN1-214ENST00000555075 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
ACTN1-214ENST00000555075 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
ACTN1-214ENST00000555075 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
ACTN1-214ENST00000555075 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
ACTN1-214ENST00000555075 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
ACTN1-214ENST00000555075 SYCP2Q9BX26 1530 aa18.49■□□□□ 0.55
ACTN1-214ENST00000555075 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
ACTN1-214ENST00000555075 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
ACTN1-214ENST00000555075 CAMSAP2Q08AD1 1489 aa18.48■□□□□ 0.55
ACTN1-214ENST00000555075 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
ACTN1-214ENST00000555075 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
ACTN1-214ENST00000555075 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
ACTN1-214ENST00000555075 ZMYM4Q5VZL5 1548 aa18.46■□□□□ 0.55
ACTN1-214ENST00000555075 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
ACTN1-214ENST00000555075 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
ACTN1-214ENST00000555075 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.54
ACTN1-214ENST00000555075 ZFYVE16Q7Z3T8 1539 aa18.45■□□□□ 0.54
ACTN1-214ENST00000555075 ADAMTSL3P82987 1691 aa18.45■□□□□ 0.54
ACTN1-214ENST00000555075 BCORL1Q5H9F3 1711 aa18.44■□□□□ 0.54
ACTN1-214ENST00000555075 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
ACTN1-214ENST00000555075 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
ACTN1-214ENST00000555075 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
ACTN1-214ENST00000555075 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
ACTN1-214ENST00000555075 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
ACTN1-214ENST00000555075 PTPN23Q9H3S7 1636 aa18.4■□□□□ 0.54
ACTN1-214ENST00000555075 PTPRMP28827 1452 aa18.39■□□□□ 0.54
ACTN1-214ENST00000555075 KDM5CP41229 1560 aa18.38■□□□□ 0.53
ACTN1-214ENST00000555075 MLH3Q9UHC1 1453 aa18.38■□□□□ 0.53
ACTN1-214ENST00000555075 ATP10AO60312 1499 aa18.37■□□□□ 0.53
ACTN1-214ENST00000555075 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
ACTN1-214ENST00000555075 MBD5Q9P267 1494 aa18.36■□□□□ 0.53
ACTN1-214ENST00000555075 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
ACTN1-214ENST00000555075 MLECQ14165 292 aa18.35■□□□□ 0.53
ACTN1-214ENST00000555075 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
ACTN1-214ENST00000555075 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
ACTN1-214ENST00000555075 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
ACTN1-214ENST00000555075 ITGAEP38570 1179 aa18.34■□□□□ 0.53
ACTN1-214ENST00000555075 TCOF1Q13428 1488 aaKnown RBP18.33■□□□□ 0.53
ACTN1-214ENST00000555075 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
ACTN1-214ENST00000555075 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
ACTN1-214ENST00000555075 CHIC2Q9UKJ5 165 aa18.32■□□□□ 0.52
ACTN1-214ENST00000555075 DAPK1P53355 1430 aa18.3■□□□□ 0.52
ACTN1-214ENST00000555075 DIP2CQ9Y2E4 1556 aa18.29■□□□□ 0.52
ACTN1-214ENST00000555075 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
ACTN1-214ENST00000555075 KIDINS220Q9ULH0 1771 aa18.27■□□□□ 0.52
ACTN1-214ENST00000555075 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
ACTN1-214ENST00000555075 A2MP01023 1474 aa18.27■□□□□ 0.52
ACTN1-214ENST00000555075 ABCC5O15440 1437 aa18.27■□□□□ 0.52
ACTN1-214ENST00000555075 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.51
ACTN1-214ENST00000555075 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
ACTN1-214ENST00000555075 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
ACTN1-214ENST00000555075 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
ACTN1-214ENST00000555075 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
ACTN1-214ENST00000555075 SHANK2Q9UPX8 1470 aa18.25■□□□□ 0.51
ACTN1-214ENST00000555075 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
ACTN1-214ENST00000555075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
ACTN1-214ENST00000555075 GGT6Q6P531 493 aa18.23■□□□□ 0.51
ACTN1-214ENST00000555075 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
ACTN1-214ENST00000555075 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
ACTN1-214ENST00000555075 KIF3BO15066 747 aa18.22■□□□□ 0.51
ACTN1-214ENST00000555075 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
ACTN1-214ENST00000555075 KIF15Q9NS87 1388 aa18.21■□□□□ 0.51
ACTN1-214ENST00000555075 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
ACTN1-214ENST00000555075 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
ACTN1-214ENST00000555075 CROCC2H7BZ55 1655 aa18.19■□□□□ 0.5
ACTN1-214ENST00000555075 AGLP35573 1532 aa18.18■□□□□ 0.5
ACTN1-214ENST00000555075 DUOX2Q9NRD8 1548 aa18.17■□□□□ 0.5
ACTN1-214ENST00000555075 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
ACTN1-214ENST00000555075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.498e-8■□□□□ 9
ACTN1-214ENST00000555075 NCOA1Q15788 1441 aa18.13■□□□□ 0.49
ACTN1-214ENST00000555075 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
ACTN1-214ENST00000555075 WASHC2CQ9Y4E1 1318 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms