RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
SRSF5-208ENST00000554929 POLA2Q14181 598 aa17.27■□□□□ 0.36
SRSF5-208ENST00000554929 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
SRSF5-208ENST00000554929 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
SRSF5-208ENST00000554929 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
SRSF5-208ENST00000554929 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
SRSF5-208ENST00000554929 MLECQ14165 292 aa17.15■□□□□ 0.34
SRSF5-208ENST00000554929 ABCA8O94911 1581 aa17.15■□□□□ 0.34
SRSF5-208ENST00000554929 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
SRSF5-208ENST00000554929 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
SRSF5-208ENST00000554929 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
SRSF5-208ENST00000554929 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
SRSF5-208ENST00000554929 NEO1Q92859 1461 aa17.12■□□□□ 0.33
SRSF5-208ENST00000554929 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
SRSF5-208ENST00000554929 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
SRSF5-208ENST00000554929 STRCQ7RTU9 1775 aa17.08■□□□□ 0.33
SRSF5-208ENST00000554929 FANCAO15360 1455 aa17.08■□□□□ 0.32
SRSF5-208ENST00000554929 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
SRSF5-208ENST00000554929 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
SRSF5-208ENST00000554929 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SRSF5-208ENST00000554929 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
SRSF5-208ENST00000554929 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
SRSF5-208ENST00000554929 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
SRSF5-208ENST00000554929 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
SRSF5-208ENST00000554929 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-208ENST00000554929 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-208ENST00000554929 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.31
SRSF5-208ENST00000554929 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
SRSF5-208ENST00000554929 RICTORQ6R327 1708 aa17■□□□□ 0.31
SRSF5-208ENST00000554929 PTPRTO14522 1441 aa16.98■□□□□ 0.31
SRSF5-208ENST00000554929 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
SRSF5-208ENST00000554929 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
SRSF5-208ENST00000554929 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
SRSF5-208ENST00000554929 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
SRSF5-208ENST00000554929 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
SRSF5-208ENST00000554929 ZFYVE16Q7Z3T8 1539 aa16.96■□□□□ 0.31
SRSF5-208ENST00000554929 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
SRSF5-208ENST00000554929 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
SRSF5-208ENST00000554929 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
SRSF5-208ENST00000554929 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
SRSF5-208ENST00000554929 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
SRSF5-208ENST00000554929 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
SRSF5-208ENST00000554929 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
SRSF5-208ENST00000554929 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
SRSF5-208ENST00000554929 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SRSF5-208ENST00000554929 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
SRSF5-208ENST00000554929 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
SRSF5-208ENST00000554929 HECW1Q76N89 1606 aa16.87■□□□□ 0.29
SRSF5-208ENST00000554929 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
SRSF5-208ENST00000554929 ATP10AO60312 1499 aa16.84■□□□□ 0.29
SRSF5-208ENST00000554929 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
SRSF5-208ENST00000554929 HSPA1LP34931 641 aa16.83■□□□□ 0.28
SRSF5-208ENST00000554929 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
SRSF5-208ENST00000554929 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
SRSF5-208ENST00000554929 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
SRSF5-208ENST00000554929 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
SRSF5-208ENST00000554929 SCAPERQ9BY12 1400 aa16.79■□□□□ 0.28
SRSF5-208ENST00000554929 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
SRSF5-208ENST00000554929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRSF5-208ENST00000554929 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
SRSF5-208ENST00000554929 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
SRSF5-208ENST00000554929 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
SRSF5-208ENST00000554929 C3P01024 1663 aa16.75■□□□□ 0.27
SRSF5-208ENST00000554929 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
SRSF5-208ENST00000554929 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
SRSF5-208ENST00000554929 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
SRSF5-208ENST00000554929 POTEHQ6S545 545 aa16.71■□□□□ 0.27
SRSF5-208ENST00000554929 TOM1O60784 492 aa16.69■□□□□ 0.26
SRSF5-208ENST00000554929 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
SRSF5-208ENST00000554929 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
SRSF5-208ENST00000554929 PLCH2O75038 1416 aa16.66■□□□□ 0.26
SRSF5-208ENST00000554929 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
SRSF5-208ENST00000554929 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
SRSF5-208ENST00000554929 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
SRSF5-208ENST00000554929 PKD2Q13563 968 aa16.64■□□□□ 0.25
SRSF5-208ENST00000554929 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SRSF5-208ENST00000554929 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
SRSF5-208ENST00000554929 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
SRSF5-208ENST00000554929 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SRSF5-208ENST00000554929 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
SRSF5-208ENST00000554929 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
SRSF5-208ENST00000554929 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
SRSF5-208ENST00000554929 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
SRSF5-208ENST00000554929 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
SRSF5-208ENST00000554929 AGLP35573 1532 aa16.55■□□□□ 0.24
SRSF5-208ENST00000554929 NPATQ14207 1427 aa16.55■□□□□ 0.24
SRSF5-208ENST00000554929 KDM5CP41229 1560 aa16.55■□□□□ 0.24
SRSF5-208ENST00000554929 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
SRSF5-208ENST00000554929 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
SRSF5-208ENST00000554929 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
SRSF5-208ENST00000554929 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
SRSF5-208ENST00000554929 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
SRSF5-208ENST00000554929 TCOF1Q13428 1488 aaKnown RBP16.53■□□□□ 0.24
SRSF5-208ENST00000554929 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
SRSF5-208ENST00000554929 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
SRSF5-208ENST00000554929 CPS1P31327 1500 aa16.5■□□□□ 0.23
SRSF5-208ENST00000554929 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
SRSF5-208ENST00000554929 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
SRSF5-208ENST00000554929 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
SRSF5-208ENST00000554929 REM2Q8IYK8 340 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms