RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 PRKRIP1Q9H875 184 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-207ENST00000554691 FRAT1Q92837 279 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-207ENST00000554691 ESF1Q9H501 851 aaKnown RBP8.12□□□□□ -1.11
PCNX1-207ENST00000554691 KTN1Q86UP2 1357 aaKnown RBP8.11□□□□□ -1.11
PCNX1-207ENST00000554691 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
PCNX1-207ENST00000554691 CHMP5Q9NZZ3 219 aa8.11□□□□□ -1.11
PCNX1-207ENST00000554691 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
PCNX1-207ENST00000554691 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
PCNX1-207ENST00000554691 NGEFQ8N5V2 710 aa8.1□□□□□ -1.11
PCNX1-207ENST00000554691 FMN1Q68DA7 1419 aa8.1□□□□□ -1.11
PCNX1-207ENST00000554691 RWDD1Q9H446 243 aaPredicted RBP8.1□□□□□ -1.11
PCNX1-207ENST00000554691 PAK3O75914 559 aaPredicted RBP8.1□□□□□ -1.11
PCNX1-207ENST00000554691 PHF14O94880 888 aa8.1□□□□□ -1.11
PCNX1-207ENST00000554691 CALD1Q05682 793 aaKnown RBP8.1□□□□□ -1.11
PCNX1-207ENST00000554691 SLKQ9H2G2 1235 aaPredicted RBP8.1□□□□□ -1.11
PCNX1-207ENST00000554691 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
PCNX1-207ENST00000554691 PDCL3Q9H2J4 239 aa8.09□□□□□ -1.11
PCNX1-207ENST00000554691 NLRP13Q86W25 1043 aa8.09□□□□□ -1.11
PCNX1-207ENST00000554691 FTSJ3Q8IY81 847 aaKnown RBP8.09□□□□□ -1.11
PCNX1-207ENST00000554691 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
PCNX1-207ENST00000554691 NACADO15069 1562 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 P3H3Q8IVL6 736 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 CARD11Q9BXL7 1154 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 BACH2Q9BYV9 841 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 KIF15Q9NS87 1388 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 CCDC66A2RUB6 948 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 CFAP53Q96M91 514 aa8.08□□□□□ -1.12
PCNX1-207ENST00000554691 SMG6Q86US8 1419 aaKnown RBP8.07□□□□□ -1.12
PCNX1-207ENST00000554691 CNTLNQ9NXG0 1405 aa8.07□□□□□ -1.12
PCNX1-207ENST00000554691 HMGN5P82970 282 aaKnown RBP8.07□□□□□ -1.12
PCNX1-207ENST00000554691 GZF1Q9H116 711 aaPredicted RBP8.07□□□□□ -1.12
PCNX1-207ENST00000554691 CCDC88BA6NC98 1476 aa8.07□□□□□ -1.12
PCNX1-207ENST00000554691 CGNL1Q0VF96 1302 aa8.06□□□□□ -1.12
PCNX1-207ENST00000554691 WASHC2AQ641Q2 1341 aa8.06□□□□□ -1.12
PCNX1-207ENST00000554691 MYBBP1AQ9BQG0 1328 aaKnown RBP8.06□□□□□ -1.12
PCNX1-207ENST00000554691 CCDC173Q0VFZ6 552 aa8.05□□□□□ -1.12
PCNX1-207ENST00000554691 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
PCNX1-207ENST00000554691 CHIC2Q9UKJ5 165 aa8.05□□□□□ -1.12
PCNX1-207ENST00000554691 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
PCNX1-207ENST00000554691 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
PCNX1-207ENST00000554691 HTATSF1O43719 755 aaKnown RBP8.04□□□□□ -1.12
PCNX1-207ENST00000554691 RRP7BPQ9NSQ0 103 aa8.04□□□□□ -1.12
PCNX1-207ENST00000554691 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
PCNX1-207ENST00000554691 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
PCNX1-207ENST00000554691 MCCP23508 829 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 EXOC6Q8TAG9 804 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 DIAPH3Q9NSV4 1193 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 ESPNB1AK53 854 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 GOLGA2Q08379 1002 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 A0A0U1RQG5 324 aaPredicted RBP8.03□□□□□ -1.12
PCNX1-207ENST00000554691 TSPY4P0CV99 314 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 TSPY10P0CW01 314 aa8.03□□□□□ -1.12
PCNX1-207ENST00000554691 ZNF771Q7L3S4 317 aaPredicted RBP8.02□□□□□ -1.12
PCNX1-207ENST00000554691 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.12
PCNX1-207ENST00000554691 ERCC6Q03468 1493 aa8.02□□□□□ -1.13
PCNX1-207ENST00000554691 TPM3P06753 285 aa8.02□□□□□ -1.13
PCNX1-207ENST00000554691 TMF1P82094 1093 aa8.02□□□□□ -1.13
PCNX1-207ENST00000554691 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
PCNX1-207ENST00000554691 CCDC39Q9UFE4 941 aa8.02□□□□□ -1.13
PCNX1-207ENST00000554691 TSPYL1Q9H0U9 437 aa8.02□□□□□ -1.13
PCNX1-207ENST00000554691 CLCN1P35523 988 aa8.01□□□□□ -1.13
PCNX1-207ENST00000554691 TOP2AP11388 1531 aaKnown RBP8.01□□□□□ -1.13
PCNX1-207ENST00000554691 IPO8O15397 1037 aaKnown RBP8.01□□□□□ -1.13
PCNX1-207ENST00000554691 DDX49Q9Y6V7 483 aaKnown RBP8.01□□□□□ -1.13
PCNX1-207ENST00000554691 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
PCNX1-207ENST00000554691 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
PCNX1-207ENST00000554691 KIF21BO75037 1637 aa8□□□□□ -1.13
PCNX1-207ENST00000554691 BRD4O60885 1362 aaPredicted RBP8□□□□□ -1.13
PCNX1-207ENST00000554691 CCDC7Q96M83 1385 aa8□□□□□ -1.13
PCNX1-207ENST00000554691 TEX35Q5T0J7 233 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 TRAK2O60296 914 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
PCNX1-207ENST00000554691 NUCB2P80303 420 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 GPS2Q13227 327 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 CIZ1Q9ULV3 898 aaPredicted RBP7.99□□□□□ -1.13
PCNX1-207ENST00000554691 CALRP27797 417 aaKnown RBP7.99□□□□□ -1.13
PCNX1-207ENST00000554691 PDCL2Q8N4E4 241 aa7.99□□□□□ -1.13
PCNX1-207ENST00000554691 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
PCNX1-207ENST00000554691 PLCB2Q00722 1185 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 KDM2AQ9Y2K7 1162 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 UACAQ9BZF9 1416 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 NOM1Q5C9Z4 860 aaKnown RBP7.98□□□□□ -1.13
PCNX1-207ENST00000554691 ZSCAN30Q86W11 494 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 NINLQ9Y2I6 1382 aa7.98□□□□□ -1.13
PCNX1-207ENST00000554691 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 ANKRD30AQ9BXX3 1397 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 ST18O60284 1047 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 DRC7Q8IY82 874 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 GRPEL1Q9HAV7 217 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 MCM5P33992 734 aa7.97□□□□□ -1.13
PCNX1-207ENST00000554691 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
PCNX1-207ENST00000554691 TRHP20396 242 aaPredicted RBP7.96□□□□□ -1.14
PCNX1-207ENST00000554691 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.14
PCNX1-207ENST00000554691 ZNF777Q9ULD5 760 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms