RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
PNN-203ENST00000554117 MADDQ8WXG6 1647 aa17.44■□□□□ 0.38
PNN-203ENST00000554117 POGZQ7Z3K3 1410 aa17.44■□□□□ 0.38
PNN-203ENST00000554117 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
PNN-203ENST00000554117 CDC42BPAQ5VT25 1732 aa17.42■□□□□ 0.38
PNN-203ENST00000554117 PLCH2O75038 1416 aa17.42■□□□□ 0.38
PNN-203ENST00000554117 PREX2Q70Z35 1606 aa17.42■□□□□ 0.38
PNN-203ENST00000554117 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
PNN-203ENST00000554117 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
PNN-203ENST00000554117 FYCO1Q9BQS8 1478 aa17.39■□□□□ 0.37
PNN-203ENST00000554117 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
PNN-203ENST00000554117 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
PNN-203ENST00000554117 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
PNN-203ENST00000554117 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
PNN-203ENST00000554117 SCAPERQ9BY12 1400 aa17.37■□□□□ 0.37
PNN-203ENST00000554117 PTPRMP28827 1452 aa17.36■□□□□ 0.37
PNN-203ENST00000554117 ZNF518AQ6AHZ1 1483 aa17.36■□□□□ 0.37
PNN-203ENST00000554117 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
PNN-203ENST00000554117 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
PNN-203ENST00000554117 KDM5CP41229 1560 aa17.29■□□□□ 0.36
PNN-203ENST00000554117 ATP10AO60312 1499 aa17.29■□□□□ 0.36
PNN-203ENST00000554117 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
PNN-203ENST00000554117 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
PNN-203ENST00000554117 ABCC1P33527 1531 aa17.27■□□□□ 0.36
PNN-203ENST00000554117 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
PNN-203ENST00000554117 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
PNN-203ENST00000554117 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
PNN-203ENST00000554117 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
PNN-203ENST00000554117 MLECQ14165 292 aa17.23■□□□□ 0.35
PNN-203ENST00000554117 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
PNN-203ENST00000554117 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
PNN-203ENST00000554117 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
PNN-203ENST00000554117 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
PNN-203ENST00000554117 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
PNN-203ENST00000554117 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.34
PNN-203ENST00000554117 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
PNN-203ENST00000554117 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
PNN-203ENST00000554117 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
PNN-203ENST00000554117 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
PNN-203ENST00000554117 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
PNN-203ENST00000554117 C3P01024 1663 aa17.18■□□□□ 0.34
PNN-203ENST00000554117 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
PNN-203ENST00000554117 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
PNN-203ENST00000554117 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
PNN-203ENST00000554117 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
PNN-203ENST00000554117 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
PNN-203ENST00000554117 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
PNN-203ENST00000554117 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
PNN-203ENST00000554117 AGLP35573 1532 aa17.12■□□□□ 0.33
PNN-203ENST00000554117 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
PNN-203ENST00000554117 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
PNN-203ENST00000554117 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
PNN-203ENST00000554117 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
PNN-203ENST00000554117 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
PNN-203ENST00000554117 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
PNN-203ENST00000554117 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
PNN-203ENST00000554117 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
PNN-203ENST00000554117 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
PNN-203ENST00000554117 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
PNN-203ENST00000554117 ILDR1Q86SU0 546 aaPredicted RBP17.07■□□□□ 0.32
PNN-203ENST00000554117 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
PNN-203ENST00000554117 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.32
PNN-203ENST00000554117 A2MP01023 1474 aa17.01■□□□□ 0.31
PNN-203ENST00000554117 HSPA2P54652 639 aa17.01■□□□□ 0.31
PNN-203ENST00000554117 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
PNN-203ENST00000554117 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
PNN-203ENST00000554117 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
PNN-203ENST00000554117 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
PNN-203ENST00000554117 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
PNN-203ENST00000554117 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
PNN-203ENST00000554117 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
PNN-203ENST00000554117 APLP2Q06481 763 aa16.97■□□□□ 0.31
PNN-203ENST00000554117 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
PNN-203ENST00000554117 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
PNN-203ENST00000554117 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
PNN-203ENST00000554117 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
PNN-203ENST00000554117 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
PNN-203ENST00000554117 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.3
PNN-203ENST00000554117 MYO3AQ8NEV4 1616 aa16.95■□□□□ 0.3
PNN-203ENST00000554117 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
PNN-203ENST00000554117 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
PNN-203ENST00000554117 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
PNN-203ENST00000554117 GGT6Q6P531 493 aa16.92■□□□□ 0.3
PNN-203ENST00000554117 NPATQ14207 1427 aa16.92■□□□□ 0.3
PNN-203ENST00000554117 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
PNN-203ENST00000554117 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
PNN-203ENST00000554117 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
PNN-203ENST00000554117 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
PNN-203ENST00000554117 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
PNN-203ENST00000554117 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
PNN-203ENST00000554117 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
PNN-203ENST00000554117 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
PNN-203ENST00000554117 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
PNN-203ENST00000554117 ZNF644Q9H582 1327 aaPredicted RBP16.89■□□□□ 0.29
PNN-203ENST00000554117 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
PNN-203ENST00000554117 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
PNN-203ENST00000554117 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
PNN-203ENST00000554117 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
PNN-203ENST00000554117 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
PNN-203ENST00000554117 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms