RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
KTN1-210ENST00000553624 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
KTN1-210ENST00000553624 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
KTN1-210ENST00000553624 TSHZ2Q9NRE2 1034 aa10.71□□□□□ -0.69
KTN1-210ENST00000553624 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
KTN1-210ENST00000553624 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
KTN1-210ENST00000553624 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
KTN1-210ENST00000553624 ST18O60284 1047 aa10.64□□□□□ -0.71
KTN1-210ENST00000553624 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
KTN1-210ENST00000553624 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
KTN1-210ENST00000553624 SNPHO15079 494 aa10.59□□□□□ -0.71
KTN1-210ENST00000553624 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
KTN1-210ENST00000553624 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
KTN1-210ENST00000553624 TMC2Q8TDI7 906 aa10.57□□□□□ -0.72
KTN1-210ENST00000553624 PDE4AP27815 886 aa10.55□□□□□ -0.72
KTN1-210ENST00000553624 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
KTN1-210ENST00000553624 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
KTN1-210ENST00000553624 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
KTN1-210ENST00000553624 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
KTN1-210ENST00000553624 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
KTN1-210ENST00000553624 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
KTN1-210ENST00000553624 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
KTN1-210ENST00000553624 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
KTN1-210ENST00000553624 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
KTN1-210ENST00000553624 KIF3CO14782 793 aa10.47□□□□□ -0.73
KTN1-210ENST00000553624 MFSD10Q14728 455 aa10.47□□□□□ -0.73
KTN1-210ENST00000553624 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
KTN1-210ENST00000553624 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
KTN1-210ENST00000553624 DSG2Q14126 1118 aa10.45□□□□□ -0.74
KTN1-210ENST00000553624 FOXK1P85037 733 aa10.44□□□□□ -0.74
KTN1-210ENST00000553624 PLPP6Q8IY26 295 aa10.42□□□□□ -0.74
KTN1-210ENST00000553624 EMP3P54852 163 aa10.4□□□□□ -0.74
KTN1-210ENST00000553624 E2F4Q16254 413 aa10.4□□□□□ -0.74
KTN1-210ENST00000553624 P3H3Q8IVL6 736 aa10.4□□□□□ -0.74
KTN1-210ENST00000553624 KCNV2Q8TDN2 545 aa10.36□□□□□ -0.75
KTN1-210ENST00000553624 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
KTN1-210ENST00000553624 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
KTN1-210ENST00000553624 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
KTN1-210ENST00000553624 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
KTN1-210ENST00000553624 DOK7Q18PE1 504 aa10.32□□□□□ -0.76
KTN1-210ENST00000553624 ZNF710Q8N1W2 664 aa10.32□□□□□ -0.76
KTN1-210ENST00000553624 UPF1Q92900 1129 aaKnown RBP eCLIP10.32□□□□□ -0.76
KTN1-210ENST00000553624 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
KTN1-210ENST00000553624 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
KTN1-210ENST00000553624 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
KTN1-210ENST00000553624 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
KTN1-210ENST00000553624 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
KTN1-210ENST00000553624 SLC34A2O95436 690 aa10.29□□□□□ -0.76
KTN1-210ENST00000553624 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
KTN1-210ENST00000553624 ARHGEF1Q92888 912 aaKnown RBP10.28□□□□□ -0.76
KTN1-210ENST00000553624 DPYSL4O14531 572 aa10.27□□□□□ -0.77
KTN1-210ENST00000553624 TBC1D12O60347 775 aa10.27□□□□□ -0.77
KTN1-210ENST00000553624 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
KTN1-210ENST00000553624 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
KTN1-210ENST00000553624 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
KTN1-210ENST00000553624 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
KTN1-210ENST00000553624 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
KTN1-210ENST00000553624 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
KTN1-210ENST00000553624 NBR1Q14596 966 aa10.24□□□□□ -0.77
KTN1-210ENST00000553624 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
KTN1-210ENST00000553624 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
KTN1-210ENST00000553624 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
KTN1-210ENST00000553624 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
KTN1-210ENST00000553624 ERBB3P21860 1342 aa10.22□□□□□ -0.77
KTN1-210ENST00000553624 PDIA6Q15084 440 aa10.2□□□□□ -0.78
KTN1-210ENST00000553624 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
KTN1-210ENST00000553624 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
KTN1-210ENST00000553624 BCANQ96GW7 911 aa10.19□□□□□ -0.78
KTN1-210ENST00000553624 EVI5O60447 810 aa10.18□□□□□ -0.78
KTN1-210ENST00000553624 NUDT7P0C024 238 aa10.17□□□□□ -0.78
KTN1-210ENST00000553624 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
KTN1-210ENST00000553624 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
KTN1-210ENST00000553624 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
KTN1-210ENST00000553624 SEMA3EO15041 775 aa10.14□□□□□ -0.79
KTN1-210ENST00000553624 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
KTN1-210ENST00000553624 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
KTN1-210ENST00000553624 DDX12PQ92771 950 aa10.09□□□□□ -0.79
KTN1-210ENST00000553624 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
KTN1-210ENST00000553624 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
KTN1-210ENST00000553624 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
KTN1-210ENST00000553624 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
KTN1-210ENST00000553624 MLLT3P42568 568 aaPredicted RBP10.07□□□□□ -0.8
KTN1-210ENST00000553624 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
KTN1-210ENST00000553624 ZNF687Q8N1G0 1237 aa10.07□□□□□ -0.8
KTN1-210ENST00000553624 PTGER2P43116 358 aa10.06□□□□□ -0.8
KTN1-210ENST00000553624 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
KTN1-210ENST00000553624 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
KTN1-210ENST00000553624 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
KTN1-210ENST00000553624 PHF14O94880 888 aa10.04□□□□□ -0.8
KTN1-210ENST00000553624 PPP4R3BQ5MIZ7 849 aa10.03□□□□□ -0.8
KTN1-210ENST00000553624 FOSBP53539 338 aa10.02□□□□□ -0.81
KTN1-210ENST00000553624 EPAS1Q99814 870 aa10.02□□□□□ -0.81
KTN1-210ENST00000553624 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
KTN1-210ENST00000553624 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
KTN1-210ENST00000553624 FBXW7Q969H0 707 aa10□□□□□ -0.81
KTN1-210ENST00000553624 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
KTN1-210ENST00000553624 OSBPP22059 807 aa9.98□□□□□ -0.81
KTN1-210ENST00000553624 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
KTN1-210ENST00000553624 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
KTN1-210ENST00000553624 MAP3K7O43318 606 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms