RNA–Protein interactions for RNA: ENST00000553314.1

TIMELESS-202, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-202ENST00000553314 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
TIMELESS-202ENST00000553314 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
TIMELESS-202ENST00000553314 CFAP74Q9C0B2 1584 aa12.72□□□□□ -0.37
TIMELESS-202ENST00000553314 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
TIMELESS-202ENST00000553314 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
TIMELESS-202ENST00000553314 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
TIMELESS-202ENST00000553314 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
TIMELESS-202ENST00000553314 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
TIMELESS-202ENST00000553314 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
TIMELESS-202ENST00000553314 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
TIMELESS-202ENST00000553314 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
TIMELESS-202ENST00000553314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.64□□□□□ -0.39
TIMELESS-202ENST00000553314 ATP10AO60312 1499 aa12.64□□□□□ -0.39
TIMELESS-202ENST00000553314 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
TIMELESS-202ENST00000553314 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
TIMELESS-202ENST00000553314 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
TIMELESS-202ENST00000553314 HSPA1LP34931 641 aa12.61□□□□□ -0.39
TIMELESS-202ENST00000553314 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
TIMELESS-202ENST00000553314 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
TIMELESS-202ENST00000553314 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
TIMELESS-202ENST00000553314 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
TIMELESS-202ENST00000553314 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
TIMELESS-202ENST00000553314 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
TIMELESS-202ENST00000553314 C3P01024 1663 aa12.58□□□□□ -0.4
TIMELESS-202ENST00000553314 SAMD9Q5K651 1589 aa12.58□□□□□ -0.4
TIMELESS-202ENST00000553314 TOM1O60784 492 aa12.57□□□□□ -0.4
TIMELESS-202ENST00000553314 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
TIMELESS-202ENST00000553314 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
TIMELESS-202ENST00000553314 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
TIMELESS-202ENST00000553314 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
TIMELESS-202ENST00000553314 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
TIMELESS-202ENST00000553314 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
TIMELESS-202ENST00000553314 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.41
TIMELESS-202ENST00000553314 PLCH2O75038 1416 aa12.52□□□□□ -0.41
TIMELESS-202ENST00000553314 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.41
TIMELESS-202ENST00000553314 PKD2Q13563 968 aa12.51□□□□□ -0.41
TIMELESS-202ENST00000553314 ABCA6Q8N139 1617 aa12.5□□□□□ -0.41
TIMELESS-202ENST00000553314 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
TIMELESS-202ENST00000553314 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
TIMELESS-202ENST00000553314 KDM5CP41229 1560 aa12.47□□□□□ -0.41
TIMELESS-202ENST00000553314 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
TIMELESS-202ENST00000553314 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
TIMELESS-202ENST00000553314 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
TIMELESS-202ENST00000553314 CNTLNQ9NXG0 1405 aa12.46□□□□□ -0.41
TIMELESS-202ENST00000553314 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
TIMELESS-202ENST00000553314 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
TIMELESS-202ENST00000553314 AGLP35573 1532 aa12.45□□□□□ -0.42
TIMELESS-202ENST00000553314 NPATQ14207 1427 aa12.45□□□□□ -0.42
TIMELESS-202ENST00000553314 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
TIMELESS-202ENST00000553314 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
TIMELESS-202ENST00000553314 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
TIMELESS-202ENST00000553314 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
TIMELESS-202ENST00000553314 KIF14Q15058 1648 aa12.42□□□□□ -0.42
TIMELESS-202ENST00000553314 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
TIMELESS-202ENST00000553314 CPS1P31327 1500 aa12.41□□□□□ -0.42
TIMELESS-202ENST00000553314 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.42
TIMELESS-202ENST00000553314 PTPRKQ15262 1439 aa12.4□□□□□ -0.42
TIMELESS-202ENST00000553314 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.43
TIMELESS-202ENST00000553314 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
TIMELESS-202ENST00000553314 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
TIMELESS-202ENST00000553314 SHANK2Q9UPX8 1470 aa12.37□□□□□ -0.43
TIMELESS-202ENST00000553314 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
TIMELESS-202ENST00000553314 ABCC1P33527 1531 aa12.36□□□□□ -0.43
TIMELESS-202ENST00000553314 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
TIMELESS-202ENST00000553314 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
TIMELESS-202ENST00000553314 CLIP1P30622 1438 aa12.33□□□□□ -0.44
TIMELESS-202ENST00000553314 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
TIMELESS-202ENST00000553314 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
TIMELESS-202ENST00000553314 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
TIMELESS-202ENST00000553314 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
TIMELESS-202ENST00000553314 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
TIMELESS-202ENST00000553314 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
TIMELESS-202ENST00000553314 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
TIMELESS-202ENST00000553314 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
TIMELESS-202ENST00000553314 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
TIMELESS-202ENST00000553314 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
TIMELESS-202ENST00000553314 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
TIMELESS-202ENST00000553314 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
TIMELESS-202ENST00000553314 GGT6Q6P531 493 aa12.29□□□□□ -0.44
TIMELESS-202ENST00000553314 POTEAQ6S8J7 498 aa12.29□□□□□ -0.44
TIMELESS-202ENST00000553314 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
TIMELESS-202ENST00000553314 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
TIMELESS-202ENST00000553314 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
TIMELESS-202ENST00000553314 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
TIMELESS-202ENST00000553314 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
TIMELESS-202ENST00000553314 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
TIMELESS-202ENST00000553314 SYCP2Q9BX26 1530 aa12.26□□□□□ -0.45
TIMELESS-202ENST00000553314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
TIMELESS-202ENST00000553314 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
TIMELESS-202ENST00000553314 PLXNC1O60486 1568 aa12.24□□□□□ -0.45
TIMELESS-202ENST00000553314 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
TIMELESS-202ENST00000553314 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
TIMELESS-202ENST00000553314 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
TIMELESS-202ENST00000553314 LRRC7Q96NW7 1537 aa12.23□□□□□ -0.45
TIMELESS-202ENST00000553314 A2MP01023 1474 aa12.23□□□□□ -0.45
TIMELESS-202ENST00000553314 TNRQ92752 1358 aa12.23□□□□□ -0.45
TIMELESS-202ENST00000553314 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
TIMELESS-202ENST00000553314 SYNMO15061 1565 aa12.22□□□□□ -0.45
TIMELESS-202ENST00000553314 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
TIMELESS-202ENST00000553314 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms