RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.68
CDK4-215ENST00000553237 YEATS2Q9ULM3 1422 aa25.57■■□□□ 1.68
CDK4-215ENST00000553237 ZMYM4Q5VZL5 1548 aa25.56■■□□□ 1.68
CDK4-215ENST00000553237 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
CDK4-215ENST00000553237 ZFYVE16Q7Z3T8 1539 aa25.54■■□□□ 1.68
CDK4-215ENST00000553237 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
CDK4-215ENST00000553237 AFAP1Q8N556 730 aa25.53■■□□□ 1.68
CDK4-215ENST00000553237 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
CDK4-215ENST00000553237 ADAMTSL3P82987 1691 aa25.52■■□□□ 1.68
CDK4-215ENST00000553237 BCORL1Q5H9F3 1711 aa25.49■■□□□ 1.67
CDK4-215ENST00000553237 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
CDK4-215ENST00000553237 CDC42BPBQ9Y5S2 1711 aa25.49■■□□□ 1.67
CDK4-215ENST00000553237 PTPRMP28827 1452 aa25.47■■□□□ 1.67
CDK4-215ENST00000553237 MLECQ14165 292 aa25.47■■□□□ 1.67
CDK4-215ENST00000553237 ZNF518AQ6AHZ1 1483 aa25.46■■□□□ 1.67
CDK4-215ENST00000553237 PREX2Q70Z35 1606 aa25.45■■□□□ 1.67
CDK4-215ENST00000553237 HECW2Q9P2P5 1572 aa25.45■■□□□ 1.66
CDK4-215ENST00000553237 ZNF777Q9ULD5 760 aaPredicted RBP25.45■■□□□ 1.66
CDK4-215ENST00000553237 MADDQ8WXG6 1647 aa25.44■■□□□ 1.66
CDK4-215ENST00000553237 ATP10AO60312 1499 aa25.43■■□□□ 1.66
CDK4-215ENST00000553237 SIGLEC1Q9BZZ2 1709 aa25.43■■□□□ 1.66
CDK4-215ENST00000553237 MTUS2Q5JR59 1369 aa25.43■■□□□ 1.66
CDK4-215ENST00000553237 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
CDK4-215ENST00000553237 TRAPPC8Q9Y2L5 1435 aa25.41■■□□□ 1.66
CDK4-215ENST00000553237 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
CDK4-215ENST00000553237 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
CDK4-215ENST00000553237 GPATCH8Q9UKJ3 1502 aaKnown RBP25.4■■□□□ 1.66
CDK4-215ENST00000553237 C9orf84Q5VXU9 1444 aa25.38■■□□□ 1.65
CDK4-215ENST00000553237 ABCC1P33527 1531 aa25.38■■□□□ 1.65
CDK4-215ENST00000553237 KDM5CP41229 1560 aa25.38■■□□□ 1.65
CDK4-215ENST00000553237 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
CDK4-215ENST00000553237 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
CDK4-215ENST00000553237 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
CDK4-215ENST00000553237 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
CDK4-215ENST00000553237 MLH3Q9UHC1 1453 aa25.33■■□□□ 1.65
CDK4-215ENST00000553237 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
CDK4-215ENST00000553237 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
CDK4-215ENST00000553237 DIP2CQ9Y2E4 1556 aa25.3■■□□□ 1.64
CDK4-215ENST00000553237 EHBP1L1Q8N3D4 1523 aa25.28■■□□□ 1.64
CDK4-215ENST00000553237 SYCP2Q9BX26 1530 aa25.27■■□□□ 1.64
CDK4-215ENST00000553237 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
CDK4-215ENST00000553237 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
CDK4-215ENST00000553237 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
CDK4-215ENST00000553237 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
CDK4-215ENST00000553237 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
CDK4-215ENST00000553237 KIAA1107Q9UPP5 1409 aa25.23■■□□□ 1.63
CDK4-215ENST00000553237 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
CDK4-215ENST00000553237 PLEKHH2Q8IVE3 1493 aa25.22■■□□□ 1.63
CDK4-215ENST00000553237 KIDINS220Q9ULH0 1771 aa25.22■■□□□ 1.63
CDK4-215ENST00000553237 CEBPAP49715 358 aaPredicted RBP25.21■■□□□ 1.63
CDK4-215ENST00000553237 REREQ9P2R6 1566 aa25.2■■□□□ 1.62
CDK4-215ENST00000553237 LMTK3Q96Q04 1460 aa25.18■■□□□ 1.62
CDK4-215ENST00000553237 NCOA2Q15596 1464 aa25.17■■□□□ 1.62
CDK4-215ENST00000553237 HSPA2P54652 639 aa25.15■■□□□ 1.62
CDK4-215ENST00000553237 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
CDK4-215ENST00000553237 AGLP35573 1532 aa25.15■■□□□ 1.62
CDK4-215ENST00000553237 SUPT6HQ7KZ85 1726 aaKnown RBP25.13■■□□□ 1.61
CDK4-215ENST00000553237 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
CDK4-215ENST00000553237 ATP7AQ04656 1500 aa25.12■■□□□ 1.61
CDK4-215ENST00000553237 LRRC9Q6ZRR7 1453 aa25.11■■□□□ 1.61
CDK4-215ENST00000553237 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
CDK4-215ENST00000553237 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
CDK4-215ENST00000553237 A2MP01023 1474 aa25.07■■□□□ 1.6
CDK4-215ENST00000553237 CAMSAP2Q08AD1 1489 aa25.05■■□□□ 1.6
CDK4-215ENST00000553237 ILDR1Q86SU0 546 aaPredicted RBP25.04■■□□□ 1.6
CDK4-215ENST00000553237 MAP3K1Q13233 1512 aa25.03■■□□□ 1.6
CDK4-215ENST00000553237 APLP2Q06481 763 aa25.02■■□□□ 1.6
CDK4-215ENST00000553237 GGT6Q6P531 493 aa25.02■■□□□ 1.6
CDK4-215ENST00000553237 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
CDK4-215ENST00000553237 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
CDK4-215ENST00000553237 CCDC141Q6ZP82 1450 aa25■■□□□ 1.59
CDK4-215ENST00000553237 PLXNC1O60486 1568 aa24.99■■□□□ 1.59
CDK4-215ENST00000553237 C3P01024 1663 aa24.99■■□□□ 1.59
CDK4-215ENST00000553237 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
CDK4-215ENST00000553237 TSPY4P0CV99 314 aa24.96■■□□□ 1.59
CDK4-215ENST00000553237 TSPY10P0CW01 314 aa24.96■■□□□ 1.59
CDK4-215ENST00000553237 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
CDK4-215ENST00000553237 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
CDK4-215ENST00000553237 ZMYM3Q14202 1370 aa24.95■■□□□ 1.59
CDK4-215ENST00000553237 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
CDK4-215ENST00000553237 DHX29Q7Z478 1369 aaKnown RBP24.94■■□□□ 1.58
CDK4-215ENST00000553237 SETD1BQ9UPS6 1966 aaKnown RBP24.93■■□□□ 1.58
CDK4-215ENST00000553237 MYOM3Q5VTT5 1437 aa24.92■■□□□ 1.58
CDK4-215ENST00000553237 KIF3BO15066 747 aa24.91■■□□□ 1.58
CDK4-215ENST00000553237 ARHGEF5Q12774 1597 aa24.9■■□□□ 1.58
CDK4-215ENST00000553237 CLTCQ00610 1675 aaKnown RBP24.88■■□□□ 1.57
CDK4-215ENST00000553237 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
CDK4-215ENST00000553237 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
CDK4-215ENST00000553237 MROH2AA6NES4 1674 aa24.86■■□□□ 1.57
CDK4-215ENST00000553237 NPATQ14207 1427 aa24.84■■□□□ 1.57
CDK4-215ENST00000553237 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
CDK4-215ENST00000553237 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
CDK4-215ENST00000553237 WASHC2CQ9Y4E1 1318 aa24.78■■□□□ 1.56
CDK4-215ENST00000553237 STRCQ7RTU9 1775 aa24.77■■□□□ 1.56
CDK4-215ENST00000553237 FBXO41Q8TF61 875 aa24.77■■□□□ 1.56
CDK4-215ENST00000553237 MAST1Q9Y2H9 1570 aa24.76■■□□□ 1.55
CDK4-215ENST00000553237 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
CDK4-215ENST00000553237 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
CDK4-215ENST00000553237 ABCC5O15440 1437 aa24.73■■□□□ 1.55
CDK4-215ENST00000553237 FGD6Q6ZV73 1430 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms