RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CDK13Q14004 1512 aaKnown RBP18.61■□□□□ 0.57
TMEM116-218ENST00000552839 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
TMEM116-218ENST00000552839 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
TMEM116-218ENST00000552839 PLCH2O75038 1416 aa18.58■□□□□ 0.57
TMEM116-218ENST00000552839 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
TMEM116-218ENST00000552839 ATP10AO60312 1499 aa18.55■□□□□ 0.56
TMEM116-218ENST00000552839 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
TMEM116-218ENST00000552839 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
TMEM116-218ENST00000552839 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
TMEM116-218ENST00000552839 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
TMEM116-218ENST00000552839 STRCQ7RTU9 1775 aa18.5■□□□□ 0.55
TMEM116-218ENST00000552839 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
TMEM116-218ENST00000552839 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
TMEM116-218ENST00000552839 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
TMEM116-218ENST00000552839 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
TMEM116-218ENST00000552839 KIF14Q15058 1648 aa18.47■□□□□ 0.55
TMEM116-218ENST00000552839 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
TMEM116-218ENST00000552839 KDM5CP41229 1560 aa18.44■□□□□ 0.54
TMEM116-218ENST00000552839 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
TMEM116-218ENST00000552839 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
TMEM116-218ENST00000552839 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
TMEM116-218ENST00000552839 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
TMEM116-218ENST00000552839 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
TMEM116-218ENST00000552839 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
TMEM116-218ENST00000552839 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
TMEM116-218ENST00000552839 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
TMEM116-218ENST00000552839 LRRIQ1Q96JM4 1722 aa18.41■□□□□ 0.54
TMEM116-218ENST00000552839 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
TMEM116-218ENST00000552839 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
TMEM116-218ENST00000552839 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
TMEM116-218ENST00000552839 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
TMEM116-218ENST00000552839 C3P01024 1663 aa18.4■□□□□ 0.54
TMEM116-218ENST00000552839 ILDR2Q71H61 639 aa18.39■□□□□ 0.53
TMEM116-218ENST00000552839 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
TMEM116-218ENST00000552839 DISP3Q9P2K9 1392 aa18.38■□□□□ 0.53
TMEM116-218ENST00000552839 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
TMEM116-218ENST00000552839 CLIP1P30622 1438 aa18.36■□□□□ 0.53
TMEM116-218ENST00000552839 MLH3Q9UHC1 1453 aa18.35■□□□□ 0.53
TMEM116-218ENST00000552839 PTPRTO14522 1441 aa18.34■□□□□ 0.53
TMEM116-218ENST00000552839 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.53
TMEM116-218ENST00000552839 AGLP35573 1532 aa18.33■□□□□ 0.52
TMEM116-218ENST00000552839 PREX2Q70Z35 1606 aa18.32■□□□□ 0.52
TMEM116-218ENST00000552839 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
TMEM116-218ENST00000552839 ABCC1P33527 1531 aa18.31■□□□□ 0.52
TMEM116-218ENST00000552839 KIDINS220Q9ULH0 1771 aa18.31■□□□□ 0.52
TMEM116-218ENST00000552839 SOCS7O14512 581 aa18.3■□□□□ 0.52
TMEM116-218ENST00000552839 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
TMEM116-218ENST00000552839 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
TMEM116-218ENST00000552839 CDC42BPAQ5VT25 1732 aa18.27■□□□□ 0.52
TMEM116-218ENST00000552839 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
TMEM116-218ENST00000552839 NCOA1Q15788 1441 aa18.25■□□□□ 0.51
TMEM116-218ENST00000552839 CNTLNQ9NXG0 1405 aa18.24■□□□□ 0.51
TMEM116-218ENST00000552839 MROH2AA6NES4 1674 aa18.22■□□□□ 0.51
TMEM116-218ENST00000552839 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
TMEM116-218ENST00000552839 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
TMEM116-218ENST00000552839 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
TMEM116-218ENST00000552839 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
TMEM116-218ENST00000552839 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
TMEM116-218ENST00000552839 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
TMEM116-218ENST00000552839 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
TMEM116-218ENST00000552839 NPATQ14207 1427 aa18.19■□□□□ 0.5
TMEM116-218ENST00000552839 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
TMEM116-218ENST00000552839 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
TMEM116-218ENST00000552839 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
TMEM116-218ENST00000552839 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
TMEM116-218ENST00000552839 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
TMEM116-218ENST00000552839 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
TMEM116-218ENST00000552839 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
TMEM116-218ENST00000552839 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
TMEM116-218ENST00000552839 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
TMEM116-218ENST00000552839 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
TMEM116-218ENST00000552839 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
TMEM116-218ENST00000552839 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
TMEM116-218ENST00000552839 FYCO1Q9BQS8 1478 aa18.11■□□□□ 0.49
TMEM116-218ENST00000552839 PLXNC1O60486 1568 aa18.11■□□□□ 0.49
TMEM116-218ENST00000552839 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
TMEM116-218ENST00000552839 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
TMEM116-218ENST00000552839 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
TMEM116-218ENST00000552839 A2MP01023 1474 aa18.09■□□□□ 0.49
TMEM116-218ENST00000552839 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
TMEM116-218ENST00000552839 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
TMEM116-218ENST00000552839 PKD2Q13563 968 aa18.09■□□□□ 0.49
TMEM116-218ENST00000552839 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
TMEM116-218ENST00000552839 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
TMEM116-218ENST00000552839 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
TMEM116-218ENST00000552839 GGT6Q6P531 493 aa18.07■□□□□ 0.48
TMEM116-218ENST00000552839 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
TMEM116-218ENST00000552839 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
TMEM116-218ENST00000552839 ADGBQ8N7X0 1667 aa18.04■□□□□ 0.48
TMEM116-218ENST00000552839 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
TMEM116-218ENST00000552839 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
TMEM116-218ENST00000552839 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
TMEM116-218ENST00000552839 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
TMEM116-218ENST00000552839 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
TMEM116-218ENST00000552839 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
TMEM116-218ENST00000552839 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
TMEM116-218ENST00000552839 TIAM1Q13009 1591 aa17.96■□□□□ 0.47
TMEM116-218ENST00000552839 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
TMEM116-218ENST00000552839 NEURL4Q96JN8 1562 aa17.95■□□□□ 0.46
TMEM116-218ENST00000552839 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms