RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
SUPT16H-202ENST00000552829 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
SUPT16H-202ENST00000552829 HECW1Q76N89 1606 aa19.5■□□□□ 0.71
SUPT16H-202ENST00000552829 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
SUPT16H-202ENST00000552829 PREX1Q8TCU6 1659 aa19.49■□□□□ 0.71
SUPT16H-202ENST00000552829 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
SUPT16H-202ENST00000552829 MLECQ14165 292 aa19.46■□□□□ 0.71
SUPT16H-202ENST00000552829 ATP10AO60312 1499 aa19.43■□□□□ 0.7
SUPT16H-202ENST00000552829 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
SUPT16H-202ENST00000552829 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
SUPT16H-202ENST00000552829 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
SUPT16H-202ENST00000552829 PLCH2O75038 1416 aa19.41■□□□□ 0.7
SUPT16H-202ENST00000552829 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
SUPT16H-202ENST00000552829 C9orf84Q5VXU9 1444 aa19.39■□□□□ 0.69
SUPT16H-202ENST00000552829 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
SUPT16H-202ENST00000552829 PTPRTO14522 1441 aa19.37■□□□□ 0.69
SUPT16H-202ENST00000552829 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SUPT16H-202ENST00000552829 LTBP4Q8N2S1 1624 aa19.33■□□□□ 0.69
SUPT16H-202ENST00000552829 CDK13Q14004 1512 aaKnown RBP19.32■□□□□ 0.68
SUPT16H-202ENST00000552829 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
SUPT16H-202ENST00000552829 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
SUPT16H-202ENST00000552829 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
SUPT16H-202ENST00000552829 KDM5CP41229 1560 aa19.29■□□□□ 0.68
SUPT16H-202ENST00000552829 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
SUPT16H-202ENST00000552829 REREQ9P2R6 1566 aa19.27■□□□□ 0.68
SUPT16H-202ENST00000552829 C3P01024 1663 aa19.27■□□□□ 0.68
SUPT16H-202ENST00000552829 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.67
SUPT16H-202ENST00000552829 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
SUPT16H-202ENST00000552829 AFAP1Q8N556 730 aa19.24■□□□□ 0.67
SUPT16H-202ENST00000552829 EEA1Q15075 1411 aa19.23■□□□□ 0.67
SUPT16H-202ENST00000552829 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
SUPT16H-202ENST00000552829 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
SUPT16H-202ENST00000552829 AGLP35573 1532 aa19.21■□□□□ 0.67
SUPT16H-202ENST00000552829 KIF14Q15058 1648 aa19.21■□□□□ 0.67
SUPT16H-202ENST00000552829 MLH3Q9UHC1 1453 aa19.2■□□□□ 0.66
SUPT16H-202ENST00000552829 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
SUPT16H-202ENST00000552829 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
SUPT16H-202ENST00000552829 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
SUPT16H-202ENST00000552829 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
SUPT16H-202ENST00000552829 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
SUPT16H-202ENST00000552829 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
SUPT16H-202ENST00000552829 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
SUPT16H-202ENST00000552829 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
SUPT16H-202ENST00000552829 NPATQ14207 1427 aa19.11■□□□□ 0.65
SUPT16H-202ENST00000552829 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
SUPT16H-202ENST00000552829 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
SUPT16H-202ENST00000552829 MROH2AA6NES4 1674 aa19.09■□□□□ 0.65
SUPT16H-202ENST00000552829 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
SUPT16H-202ENST00000552829 ABCC1P33527 1531 aa19.08■□□□□ 0.64
SUPT16H-202ENST00000552829 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.64
SUPT16H-202ENST00000552829 ZNF335Q9H4Z2 1342 aaPredicted RBP19.07■□□□□ 0.64
SUPT16H-202ENST00000552829 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
SUPT16H-202ENST00000552829 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
SUPT16H-202ENST00000552829 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
SUPT16H-202ENST00000552829 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
SUPT16H-202ENST00000552829 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
SUPT16H-202ENST00000552829 CLIP1P30622 1438 aa19.06■□□□□ 0.64
SUPT16H-202ENST00000552829 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
SUPT16H-202ENST00000552829 ZMYM3Q14202 1370 aa19.04■□□□□ 0.64
SUPT16H-202ENST00000552829 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
SUPT16H-202ENST00000552829 PKD2Q13563 968 aa19.02■□□□□ 0.64
SUPT16H-202ENST00000552829 TCOF1Q13428 1488 aaKnown RBP19.02■□□□□ 0.63
SUPT16H-202ENST00000552829 ZNF142P52746 1687 aaPredicted RBP19.01■□□□□ 0.63
SUPT16H-202ENST00000552829 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
SUPT16H-202ENST00000552829 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
SUPT16H-202ENST00000552829 MYO3AQ8NEV4 1616 aa18.97■□□□□ 0.63
SUPT16H-202ENST00000552829 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
SUPT16H-202ENST00000552829 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
SUPT16H-202ENST00000552829 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
SUPT16H-202ENST00000552829 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
SUPT16H-202ENST00000552829 CLTCQ00610 1675 aaKnown RBP18.95■□□□□ 0.62
SUPT16H-202ENST00000552829 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
SUPT16H-202ENST00000552829 HSPA1LP34931 641 aa18.93■□□□□ 0.62
SUPT16H-202ENST00000552829 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
SUPT16H-202ENST00000552829 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
SUPT16H-202ENST00000552829 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
SUPT16H-202ENST00000552829 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
SUPT16H-202ENST00000552829 CASKIN1Q8WXD9 1431 aa18.88■□□□□ 0.61
SUPT16H-202ENST00000552829 ATP7AQ04656 1500 aa18.88■□□□□ 0.61
SUPT16H-202ENST00000552829 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
SUPT16H-202ENST00000552829 A2ML1A8K2U0 1454 aa18.87■□□□□ 0.61
SUPT16H-202ENST00000552829 A2MP01023 1474 aa18.87■□□□□ 0.61
SUPT16H-202ENST00000552829 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
SUPT16H-202ENST00000552829 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
SUPT16H-202ENST00000552829 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
SUPT16H-202ENST00000552829 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.61
SUPT16H-202ENST00000552829 CPS1P31327 1500 aa18.85■□□□□ 0.61
SUPT16H-202ENST00000552829 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
SUPT16H-202ENST00000552829 TOM1O60784 492 aa18.85■□□□□ 0.61
SUPT16H-202ENST00000552829 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
SUPT16H-202ENST00000552829 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
SUPT16H-202ENST00000552829 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
SUPT16H-202ENST00000552829 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
SUPT16H-202ENST00000552829 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.6
SUPT16H-202ENST00000552829 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
SUPT16H-202ENST00000552829 ALKQ9UM73 1620 aa18.82■□□□□ 0.6
SUPT16H-202ENST00000552829 GGT6Q6P531 493 aa18.82■□□□□ 0.6
SUPT16H-202ENST00000552829 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
SUPT16H-202ENST00000552829 PLEKHH2Q8IVE3 1493 aa18.8■□□□□ 0.6
SUPT16H-202ENST00000552829 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms