RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
TMEM116-216ENST00000552800 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
TMEM116-216ENST00000552800 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
TMEM116-216ENST00000552800 PTPRGP23470 1445 aa14.83□□□□□ -0.03
TMEM116-216ENST00000552800 MIA2Q96PC5 1412 aa14.83□□□□□ -0.03
TMEM116-216ENST00000552800 NCOA2Q15596 1464 aa14.83□□□□□ -0.03
TMEM116-216ENST00000552800 MYOM3Q5VTT5 1437 aa14.82□□□□□ -0.04
TMEM116-216ENST00000552800 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
TMEM116-216ENST00000552800 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
TMEM116-216ENST00000552800 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
TMEM116-216ENST00000552800 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
TMEM116-216ENST00000552800 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
TMEM116-216ENST00000552800 HAX1O00165 279 aa14.79□□□□□ -0.04
TMEM116-216ENST00000552800 ATP10BO94823 1461 aa14.79□□□□□ -0.04
TMEM116-216ENST00000552800 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
TMEM116-216ENST00000552800 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
TMEM116-216ENST00000552800 TROQ12816 1431 aaPredicted RBP14.78□□□□□ -0.04
TMEM116-216ENST00000552800 TTBK1Q5TCY1 1321 aaPredicted RBP14.78□□□□□ -0.04
TMEM116-216ENST00000552800 CDK13Q14004 1512 aaKnown RBP14.77□□□□□ -0.04
TMEM116-216ENST00000552800 UACAQ9BZF9 1416 aa14.77□□□□□ -0.04
TMEM116-216ENST00000552800 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
TMEM116-216ENST00000552800 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
TMEM116-216ENST00000552800 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
TMEM116-216ENST00000552800 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
TMEM116-216ENST00000552800 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
TMEM116-216ENST00000552800 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
TMEM116-216ENST00000552800 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
TMEM116-216ENST00000552800 AKNAQ7Z591 1439 aa14.69□□□□□ -0.06
TMEM116-216ENST00000552800 PTPN23Q9H3S7 1636 aa14.69□□□□□ -0.06
TMEM116-216ENST00000552800 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
TMEM116-216ENST00000552800 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
TMEM116-216ENST00000552800 GPATCH8Q9UKJ3 1502 aaKnown RBP14.67□□□□□ -0.06
TMEM116-216ENST00000552800 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
TMEM116-216ENST00000552800 CCER1Q8TC90 406 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-216ENST00000552800 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
TMEM116-216ENST00000552800 PTPRKQ15262 1439 aa14.64□□□□□ -0.07
TMEM116-216ENST00000552800 ROCK1Q13464 1354 aa14.63□□□□□ -0.07
TMEM116-216ENST00000552800 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
TMEM116-216ENST00000552800 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
TMEM116-216ENST00000552800 FAM50AQ14320 339 aaKnown RBP14.62□□□□□ -0.07
TMEM116-216ENST00000552800 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
TMEM116-216ENST00000552800 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
TMEM116-216ENST00000552800 RAB3GAP2Q9H2M9 1393 aa14.6□□□□□ -0.07
TMEM116-216ENST00000552800 KIF14Q15058 1648 aa14.6□□□□□ -0.07
TMEM116-216ENST00000552800 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
TMEM116-216ENST00000552800 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
TMEM116-216ENST00000552800 NAIPQ13075 1403 aa14.58□□□□□ -0.07
TMEM116-216ENST00000552800 DNMT1P26358 1616 aaKnown RBP14.58□□□□□ -0.08
TMEM116-216ENST00000552800 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.08
TMEM116-216ENST00000552800 ABCC5O15440 1437 aa14.57□□□□□ -0.08
TMEM116-216ENST00000552800 EVX2Q03828 476 aa14.56□□□□□ -0.08
TMEM116-216ENST00000552800 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-216ENST00000552800 ARAP3Q8WWN8 1544 aa14.56□□□□□ -0.08
TMEM116-216ENST00000552800 DAPK1P53355 1430 aa14.55□□□□□ -0.08
TMEM116-216ENST00000552800 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
TMEM116-216ENST00000552800 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
TMEM116-216ENST00000552800 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
TMEM116-216ENST00000552800 ARHGEF5Q12774 1597 aa14.53□□□□□ -0.08
TMEM116-216ENST00000552800 KIAA1107Q9UPP5 1409 aa14.53□□□□□ -0.08
TMEM116-216ENST00000552800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.08
TMEM116-216ENST00000552800 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.09
TMEM116-216ENST00000552800 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.09
TMEM116-216ENST00000552800 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 MBD5Q9P267 1494 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 SHANK2Q9UPX8 1470 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 PLCH2O75038 1416 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 PREX2Q70Z35 1606 aa14.51□□□□□ -0.09
TMEM116-216ENST00000552800 NCOA1Q15788 1441 aa14.5□□□□□ -0.09
TMEM116-216ENST00000552800 ITGAEP38570 1179 aa14.49□□□□□ -0.09
TMEM116-216ENST00000552800 PLEKHH2Q8IVE3 1493 aa14.49□□□□□ -0.09
TMEM116-216ENST00000552800 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
TMEM116-216ENST00000552800 MAPKBP1O60336 1514 aa14.47□□□□□ -0.09
TMEM116-216ENST00000552800 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.09
TMEM116-216ENST00000552800 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
TMEM116-216ENST00000552800 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
TMEM116-216ENST00000552800 MYO5CQ9NQX4 1742 aa14.44□□□□□ -0.1
TMEM116-216ENST00000552800 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
TMEM116-216ENST00000552800 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
TMEM116-216ENST00000552800 SAMD9LQ8IVG5 1584 aa14.43□□□□□ -0.1
TMEM116-216ENST00000552800 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
TMEM116-216ENST00000552800 FKBP8Q14318 412 aa14.41□□□□□ -0.1
TMEM116-216ENST00000552800 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
TMEM116-216ENST00000552800 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
TMEM116-216ENST00000552800 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
TMEM116-216ENST00000552800 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
TMEM116-216ENST00000552800 TSPY4P0CV99 314 aa14.39□□□□□ -0.11
TMEM116-216ENST00000552800 TSPY10P0CW01 314 aa14.39□□□□□ -0.11
TMEM116-216ENST00000552800 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
TMEM116-216ENST00000552800 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
TMEM116-216ENST00000552800 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
TMEM116-216ENST00000552800 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
TMEM116-216ENST00000552800 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
TMEM116-216ENST00000552800 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
TMEM116-216ENST00000552800 KDM6BO15054 1643 aa14.35□□□□□ -0.11
TMEM116-216ENST00000552800 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
TMEM116-216ENST00000552800 HNRNPMP52272 730 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMEM116-216ENST00000552800 LHX8Q68G74 356 aa14.34□□□□□ -0.11
TMEM116-216ENST00000552800 ABCC1P33527 1531 aa14.34□□□□□ -0.11
TMEM116-216ENST00000552800 KDM5DQ9BY66 1539 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms