RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
CHPT1-208ENST00000552215 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
CHPT1-208ENST00000552215 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
CHPT1-208ENST00000552215 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
CHPT1-208ENST00000552215 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
CHPT1-208ENST00000552215 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
CHPT1-208ENST00000552215 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
CHPT1-208ENST00000552215 WASHC2CQ9Y4E1 1318 aa11.61□□□□□ -0.55
CHPT1-208ENST00000552215 TIAM1Q13009 1591 aa11.6□□□□□ -0.55
CHPT1-208ENST00000552215 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
CHPT1-208ENST00000552215 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
CHPT1-208ENST00000552215 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
CHPT1-208ENST00000552215 ASXL2Q76L83 1435 aa11.59□□□□□ -0.55
CHPT1-208ENST00000552215 SAFB2Q14151 953 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHPT1-208ENST00000552215 CTTNBP2Q8WZ74 1663 aa11.58□□□□□ -0.56
CHPT1-208ENST00000552215 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
CHPT1-208ENST00000552215 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
CHPT1-208ENST00000552215 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
CHPT1-208ENST00000552215 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
CHPT1-208ENST00000552215 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
CHPT1-208ENST00000552215 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
CHPT1-208ENST00000552215 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
CHPT1-208ENST00000552215 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
CHPT1-208ENST00000552215 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
CHPT1-208ENST00000552215 STK26Q9P289 416 aa11.52□□□□□ -0.56
CHPT1-208ENST00000552215 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.57
CHPT1-208ENST00000552215 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
CHPT1-208ENST00000552215 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
CHPT1-208ENST00000552215 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
CHPT1-208ENST00000552215 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
CHPT1-208ENST00000552215 PTPRKQ15262 1439 aa11.49□□□□□ -0.57
CHPT1-208ENST00000552215 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
CHPT1-208ENST00000552215 MAGI3Q5TCQ9 1506 aa11.49□□□□□ -0.57
CHPT1-208ENST00000552215 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
CHPT1-208ENST00000552215 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
CHPT1-208ENST00000552215 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
CHPT1-208ENST00000552215 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
CHPT1-208ENST00000552215 KANK1Q14678 1352 aa11.47□□□□□ -0.57
CHPT1-208ENST00000552215 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
CHPT1-208ENST00000552215 NUTM2FA1L443 756 aa11.46□□□□□ -0.58
CHPT1-208ENST00000552215 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.58
CHPT1-208ENST00000552215 FANCAO15360 1455 aa11.46□□□□□ -0.58
CHPT1-208ENST00000552215 ABCC2Q92887 1545 aa11.45□□□□□ -0.58
CHPT1-208ENST00000552215 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
CHPT1-208ENST00000552215 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
CHPT1-208ENST00000552215 ABCC5O15440 1437 aa11.45□□□□□ -0.58
CHPT1-208ENST00000552215 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
CHPT1-208ENST00000552215 ADGRL1O94910 1474 aa11.45□□□□□ -0.58
CHPT1-208ENST00000552215 TRAPPC8Q9Y2L5 1435 aa11.44□□□□□ -0.58
CHPT1-208ENST00000552215 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
CHPT1-208ENST00000552215 DAPK1P53355 1430 aa11.44□□□□□ -0.58
CHPT1-208ENST00000552215 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
CHPT1-208ENST00000552215 SAMD9Q5K651 1589 aa11.44□□□□□ -0.58
CHPT1-208ENST00000552215 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CHPT1-208ENST00000552215 KIF14Q15058 1648 aa11.43□□□□□ -0.58
CHPT1-208ENST00000552215 TMC1Q8TDI8 760 aa11.42□□□□□ -0.58
CHPT1-208ENST00000552215 AKNAQ7Z591 1439 aa11.41□□□□□ -0.58
CHPT1-208ENST00000552215 NAIPQ13075 1403 aa11.39□□□□□ -0.59
CHPT1-208ENST00000552215 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
CHPT1-208ENST00000552215 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
CHPT1-208ENST00000552215 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
CHPT1-208ENST00000552215 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
CHPT1-208ENST00000552215 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHPT1-208ENST00000552215 PLCH2O75038 1416 aa11.38□□□□□ -0.59
CHPT1-208ENST00000552215 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
CHPT1-208ENST00000552215 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
CHPT1-208ENST00000552215 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
CHPT1-208ENST00000552215 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
CHPT1-208ENST00000552215 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
CHPT1-208ENST00000552215 TSPOAP1O95153 1857 aa11.36□□□□□ -0.59
CHPT1-208ENST00000552215 POGKQ9P215 609 aa11.36□□□□□ -0.59
CHPT1-208ENST00000552215 NCOA1Q15788 1441 aa11.36□□□□□ -0.59
CHPT1-208ENST00000552215 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
CHPT1-208ENST00000552215 TNNT2P45379 298 aaPredicted RBP11.35□□□□□ -0.59
CHPT1-208ENST00000552215 SOX12O15370 315 aa11.35□□□□□ -0.59
CHPT1-208ENST00000552215 ABCA8O94911 1581 aa11.35□□□□□ -0.59
CHPT1-208ENST00000552215 HSPA5P11021 654 aaKnown RBP11.34□□□□□ -0.59
CHPT1-208ENST00000552215 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
CHPT1-208ENST00000552215 CCDC141Q6ZP82 1450 aa11.34□□□□□ -0.59
CHPT1-208ENST00000552215 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
CHPT1-208ENST00000552215 DENND4BO75064 1496 aaPredicted RBP11.33□□□□□ -0.6
CHPT1-208ENST00000552215 MIER1Q8N108 512 aa11.33□□□□□ -0.6
CHPT1-208ENST00000552215 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
CHPT1-208ENST00000552215 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
CHPT1-208ENST00000552215 SLC26A8Q96RN1 970 aa11.32□□□□□ -0.6
CHPT1-208ENST00000552215 HFM1A2PYH4 1435 aa11.32□□□□□ -0.6
CHPT1-208ENST00000552215 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
CHPT1-208ENST00000552215 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
CHPT1-208ENST00000552215 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
CHPT1-208ENST00000552215 ANP32CO43423 234 aa11.31□□□□□ -0.6
CHPT1-208ENST00000552215 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
CHPT1-208ENST00000552215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHPT1-208ENST00000552215 KDM5BQ9UGL1 1544 aa11.3□□□□□ -0.6
CHPT1-208ENST00000552215 NBPF8Q3BBV2 869 aa11.3□□□□□ -0.6
CHPT1-208ENST00000552215 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
CHPT1-208ENST00000552215 ST20-MTHFSA0A0A6YYL1 179 aa11.29□□□□□ -0.6
CHPT1-208ENST00000552215 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
CHPT1-208ENST00000552215 IDI1Q13907 227 aa11.28□□□□□ -0.6
CHPT1-208ENST00000552215 YEATS2Q9ULM3 1422 aa11.28□□□□□ -0.6
CHPT1-208ENST00000552215 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms