RNA–Protein interactions for RNA: ENST00000552054.1

TBX3-204, Transcript of T-box 3, humanhuman

TSL 2

Gene TBX3, Length 1,814 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-204ENST00000552054 KIF14Q15058 1648 aa22.46■■□□□ 1.19
TBX3-204ENST00000552054 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
TBX3-204ENST00000552054 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.19
TBX3-204ENST00000552054 CD109Q6YHK3 1445 aa22.45■■□□□ 1.18
TBX3-204ENST00000552054 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
TBX3-204ENST00000552054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
TBX3-204ENST00000552054 TTC37Q6PGP7 1564 aa22.44■■□□□ 1.18
TBX3-204ENST00000552054 TROQ12816 1431 aaPredicted RBP22.43■■□□□ 1.18
TBX3-204ENST00000552054 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
TBX3-204ENST00000552054 MIER1Q8N108 512 aa22.41■■□□□ 1.18
TBX3-204ENST00000552054 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
TBX3-204ENST00000552054 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
TBX3-204ENST00000552054 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
TBX3-204ENST00000552054 TEX14Q8IWB6 1497 aa22.32■■□□□ 1.16
TBX3-204ENST00000552054 MTUS2Q5JR59 1369 aa22.31■■□□□ 1.16
TBX3-204ENST00000552054 KDM6BO15054 1643 aa22.3■■□□□ 1.16
TBX3-204ENST00000552054 MYO5CQ9NQX4 1742 aa22.27■■□□□ 1.16
TBX3-204ENST00000552054 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.15
TBX3-204ENST00000552054 PLCH2O75038 1416 aa22.27■■□□□ 1.15
TBX3-204ENST00000552054 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
TBX3-204ENST00000552054 FANCAO15360 1455 aa22.24■■□□□ 1.15
TBX3-204ENST00000552054 CDC42BPAQ5VT25 1732 aa22.24■■□□□ 1.15
TBX3-204ENST00000552054 CDC42BPBQ9Y5S2 1711 aa22.24■■□□□ 1.15
TBX3-204ENST00000552054 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
TBX3-204ENST00000552054 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
TBX3-204ENST00000552054 NEO1Q92859 1461 aa22.21■■□□□ 1.15
TBX3-204ENST00000552054 SETD5Q9C0A6 1442 aa22.21■■□□□ 1.15
TBX3-204ENST00000552054 PREX2Q70Z35 1606 aa22.21■■□□□ 1.15
TBX3-204ENST00000552054 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
TBX3-204ENST00000552054 AKNAQ7Z591 1439 aa22.2■■□□□ 1.14
TBX3-204ENST00000552054 ARHGAP5Q13017 1502 aa22.2■■□□□ 1.14
TBX3-204ENST00000552054 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
TBX3-204ENST00000552054 RAPGEF3O95398 923 aa22.18■■□□□ 1.14
TBX3-204ENST00000552054 ARAP3Q8WWN8 1544 aa22.18■■□□□ 1.14
TBX3-204ENST00000552054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.14
TBX3-204ENST00000552054 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
TBX3-204ENST00000552054 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
TBX3-204ENST00000552054 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
TBX3-204ENST00000552054 CFAP74Q9C0B2 1584 aa22.15■■□□□ 1.14
TBX3-204ENST00000552054 ADGRL1O94910 1474 aa22.13■■□□□ 1.13
TBX3-204ENST00000552054 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
TBX3-204ENST00000552054 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
TBX3-204ENST00000552054 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
TBX3-204ENST00000552054 SAMD9LQ8IVG5 1584 aa22.11■■□□□ 1.13
TBX3-204ENST00000552054 ZNF644Q9H582 1327 aaPredicted RBP22.1■■□□□ 1.13
TBX3-204ENST00000552054 RICTORQ6R327 1708 aa22.1■■□□□ 1.13
TBX3-204ENST00000552054 ITGAEP38570 1179 aa22.1■■□□□ 1.13
TBX3-204ENST00000552054 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
TBX3-204ENST00000552054 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.13
TBX3-204ENST00000552054 DAXXQ9UER7 740 aaPredicted RBP22.08■■□□□ 1.12
TBX3-204ENST00000552054 ABCC1P33527 1531 aa22.07■■□□□ 1.12
TBX3-204ENST00000552054 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
TBX3-204ENST00000552054 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
TBX3-204ENST00000552054 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
TBX3-204ENST00000552054 TRAPPC8Q9Y2L5 1435 aa22.04■■□□□ 1.12
TBX3-204ENST00000552054 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.12
TBX3-204ENST00000552054 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
TBX3-204ENST00000552054 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
TBX3-204ENST00000552054 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
TBX3-204ENST00000552054 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
TBX3-204ENST00000552054 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
TBX3-204ENST00000552054 SLC4A1APQ9BWU0 796 aaKnown RBP21.98■■□□□ 1.11
TBX3-204ENST00000552054 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
TBX3-204ENST00000552054 CAMSAP2Q08AD1 1489 aa21.97■■□□□ 1.11
TBX3-204ENST00000552054 ZMYM4Q5VZL5 1548 aa21.97■■□□□ 1.11
TBX3-204ENST00000552054 KDM5CP41229 1560 aa21.96■■□□□ 1.11
TBX3-204ENST00000552054 ZNF518AQ6AHZ1 1483 aa21.95■■□□□ 1.1
TBX3-204ENST00000552054 MBD5Q9P267 1494 aa21.95■■□□□ 1.1
TBX3-204ENST00000552054 KIAA1107Q9UPP5 1409 aa21.94■■□□□ 1.1
TBX3-204ENST00000552054 PLEKHH2Q8IVE3 1493 aa21.92■■□□□ 1.1
TBX3-204ENST00000552054 SIGLEC1Q9BZZ2 1709 aa21.91■■□□□ 1.1
TBX3-204ENST00000552054 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
TBX3-204ENST00000552054 ZFYVE16Q7Z3T8 1539 aa21.9■■□□□ 1.1
TBX3-204ENST00000552054 MIA2Q96PC5 1412 aa21.9■■□□□ 1.1
TBX3-204ENST00000552054 HFM1A2PYH4 1435 aa21.89■■□□□ 1.09
TBX3-204ENST00000552054 PTPN23Q9H3S7 1636 aa21.89■■□□□ 1.09
TBX3-204ENST00000552054 HECW2Q9P2P5 1572 aa21.89■■□□□ 1.09
TBX3-204ENST00000552054 KIDINS220Q9ULH0 1771 aa21.88■■□□□ 1.09
TBX3-204ENST00000552054 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
TBX3-204ENST00000552054 ABCA6Q8N139 1617 aa21.87■■□□□ 1.09
TBX3-204ENST00000552054 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
TBX3-204ENST00000552054 MLH3Q9UHC1 1453 aa21.86■■□□□ 1.09
TBX3-204ENST00000552054 DIP2CQ9Y2E4 1556 aa21.85■■□□□ 1.09
TBX3-204ENST00000552054 SPAG9O60271 1321 aaKnown RBP21.84■■□□□ 1.09
TBX3-204ENST00000552054 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
TBX3-204ENST00000552054 INO80Q9ULG1 1556 aaPredicted RBP21.83■■□□□ 1.09
TBX3-204ENST00000552054 TCOF1Q13428 1488 aaKnown RBP21.83■■□□□ 1.08
TBX3-204ENST00000552054 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
TBX3-204ENST00000552054 ARHGEF5Q12774 1597 aa21.82■■□□□ 1.08
TBX3-204ENST00000552054 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
TBX3-204ENST00000552054 ATP7AQ04656 1500 aa21.81■■□□□ 1.08
TBX3-204ENST00000552054 PTPRKQ15262 1439 aa21.81■■□□□ 1.08
TBX3-204ENST00000552054 ATP10AO60312 1499 aa21.8■■□□□ 1.08
TBX3-204ENST00000552054 PPP1R15AO75807 674 aaPredicted RBP21.78■■□□□ 1.08
TBX3-204ENST00000552054 ABCC5O15440 1437 aa21.78■■□□□ 1.08
TBX3-204ENST00000552054 NAIPQ13075 1403 aa21.78■■□□□ 1.08
TBX3-204ENST00000552054 GCC2Q8IWJ2 1684 aa21.77■■□□□ 1.08
TBX3-204ENST00000552054 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.08
TBX3-204ENST00000552054 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
TBX3-204ENST00000552054 DNMT1P26358 1616 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms