RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 MARVELD3Q96A59 401 aa14.65□□□□□ -0.06
GNPTAB-209ENST00000552009 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
GNPTAB-209ENST00000552009 TMEM92Q6UXU6 159 aa14.64□□□□□ -0.07
GNPTAB-209ENST00000552009 HOXB3P14651 431 aaPredicted RBP14.62□□□□□ -0.07
GNPTAB-209ENST00000552009 CDAN1Q8IWY9 1227 aa14.62□□□□□ -0.07
GNPTAB-209ENST00000552009 RB1CC1Q8TDY2 1594 aa14.62□□□□□ -0.07
GNPTAB-209ENST00000552009 RYDENQ9NUL5 291 aaKnown RBP14.62□□□□□ -0.07
GNPTAB-209ENST00000552009 TMC2Q8TDI7 906 aa14.56□□□□□ -0.08
GNPTAB-209ENST00000552009 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
GNPTAB-209ENST00000552009 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
GNPTAB-209ENST00000552009 PPP1R37O75864 691 aa14.54□□□□□ -0.08
GNPTAB-209ENST00000552009 HOXB1P14653 301 aaPredicted RBP14.54□□□□□ -0.08
GNPTAB-209ENST00000552009 FAM205CA6NFA0 338 aa14.52□□□□□ -0.09
GNPTAB-209ENST00000552009 C2orf72A6NCS6 295 aa14.51□□□□□ -0.09
GNPTAB-209ENST00000552009 NACADO15069 1562 aa14.49□□□□□ -0.09
GNPTAB-209ENST00000552009 KIF3CO14782 793 aa14.47□□□□□ -0.09
GNPTAB-209ENST00000552009 HS3ST6Q96QI5 342 aa14.47□□□□□ -0.09
GNPTAB-209ENST00000552009 ERBB3P21860 1342 aa14.46□□□□□ -0.09
GNPTAB-209ENST00000552009 NKX1-1Q15270 411 aaPredicted RBP14.46□□□□□ -0.09
GNPTAB-209ENST00000552009 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
GNPTAB-209ENST00000552009 GPR153Q6NV75 609 aa14.4□□□□□ -0.1
GNPTAB-209ENST00000552009 ARSIQ5FYB1 569 aa14.39□□□□□ -0.11
GNPTAB-209ENST00000552009 SLC34A2O95436 690 aa14.35□□□□□ -0.11
GNPTAB-209ENST00000552009 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
GNPTAB-209ENST00000552009 POTEB3A0JP26 581 aa14.34□□□□□ -0.11
GNPTAB-209ENST00000552009 VARS2Q5ST30 1063 aaKnown RBP14.34□□□□□ -0.11
GNPTAB-209ENST00000552009 POTEBQ6S5H4 581 aa14.34□□□□□ -0.11
GNPTAB-209ENST00000552009 UNC13AQ9UPW8 1703 aa14.33□□□□□ -0.12
GNPTAB-209ENST00000552009 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
GNPTAB-209ENST00000552009 FOXK1P85037 733 aa14.31□□□□□ -0.12
GNPTAB-209ENST00000552009 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
GNPTAB-209ENST00000552009 PCDHGA4Q9Y5G9 962 aa14.29□□□□□ -0.12
GNPTAB-209ENST00000552009 KHSRPQ92945 711 aaKnown RBP eCLIP14.28□□□□□ -0.12
GNPTAB-209ENST00000552009 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
GNPTAB-209ENST00000552009 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
GNPTAB-209ENST00000552009 NUDT7P0C024 238 aa14.26□□□□□ -0.13
GNPTAB-209ENST00000552009 TBC1D12O60347 775 aa14.25□□□□□ -0.13
GNPTAB-209ENST00000552009 DSG2Q14126 1118 aa14.25□□□□□ -0.13
GNPTAB-209ENST00000552009 PDE4AP27815 886 aa14.24□□□□□ -0.13
GNPTAB-209ENST00000552009 SPNS2Q8IVW8 549 aa14.24□□□□□ -0.13
GNPTAB-209ENST00000552009 ZNF687Q8N1G0 1237 aa14.24□□□□□ -0.13
GNPTAB-209ENST00000552009 KRTAP3-3Q9BYR6 98 aa14.24□□□□□ -0.13
GNPTAB-209ENST00000552009 KRTAP3-2Q9BYR7 98 aa14.24□□□□□ -0.13
GNPTAB-209ENST00000552009 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
GNPTAB-209ENST00000552009 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
GNPTAB-209ENST00000552009 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
GNPTAB-209ENST00000552009 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
GNPTAB-209ENST00000552009 PTCD2Q8WV60 388 aaKnown RBP14.21□□□□□ -0.13
GNPTAB-209ENST00000552009 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
GNPTAB-209ENST00000552009 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
GNPTAB-209ENST00000552009 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
GNPTAB-209ENST00000552009 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
GNPTAB-209ENST00000552009 LHX6Q9UPM6 363 aa14.16□□□□□ -0.14
GNPTAB-209ENST00000552009 MMRN1Q13201 1228 aa14.15□□□□□ -0.14
GNPTAB-209ENST00000552009 LARP6Q9BRS8 491 aaKnown RBP14.14□□□□□ -0.15
GNPTAB-209ENST00000552009 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
GNPTAB-209ENST00000552009 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
GNPTAB-209ENST00000552009 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
GNPTAB-209ENST00000552009 PBX2P40425 430 aa14.1□□□□□ -0.15
GNPTAB-209ENST00000552009 UPF1Q92900 1129 aaKnown RBP eCLIP14.09□□□□□ -0.15
GNPTAB-209ENST00000552009 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
GNPTAB-209ENST00000552009 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
GNPTAB-209ENST00000552009 OXER1Q8TDS5 423 aa14.07□□□□□ -0.16
GNPTAB-209ENST00000552009 ANKRD13DQ6ZTN6 518 aa14.05□□□□□ -0.16
GNPTAB-209ENST00000552009 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
GNPTAB-209ENST00000552009 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
GNPTAB-209ENST00000552009 MFSD10Q14728 455 aa14.03□□□□□ -0.16
GNPTAB-209ENST00000552009 PTGER2P43116 358 aa14.02□□□□□ -0.17
GNPTAB-209ENST00000552009 LSM11P83369 360 aaKnown RBP eCLIP14.01□□□□□ -0.17
GNPTAB-209ENST00000552009 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
GNPTAB-209ENST00000552009 MAP3K9P80192 1104 aa13.98□□□□□ -0.17
GNPTAB-209ENST00000552009 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
GNPTAB-209ENST00000552009 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
GNPTAB-209ENST00000552009 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
GNPTAB-209ENST00000552009 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
GNPTAB-209ENST00000552009 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
GNPTAB-209ENST00000552009 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
GNPTAB-209ENST00000552009 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
GNPTAB-209ENST00000552009 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
GNPTAB-209ENST00000552009 EVI5O60447 810 aa13.92□□□□□ -0.18
GNPTAB-209ENST00000552009 ZNF454Q8N9F8 522 aa13.92□□□□□ -0.18
GNPTAB-209ENST00000552009 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
GNPTAB-209ENST00000552009 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
GNPTAB-209ENST00000552009 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
GNPTAB-209ENST00000552009 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
GNPTAB-209ENST00000552009 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
GNPTAB-209ENST00000552009 EMILIN3Q9NT22 766 aa13.87□□□□□ -0.19
GNPTAB-209ENST00000552009 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
GNPTAB-209ENST00000552009 PSEN2P49810 448 aa13.85□□□□□ -0.19
GNPTAB-209ENST00000552009 FOSBP53539 338 aa13.85□□□□□ -0.19
GNPTAB-209ENST00000552009 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
GNPTAB-209ENST00000552009 TK2O00142 265 aa13.84□□□□□ -0.19
GNPTAB-209ENST00000552009 ADGRD1Q6QNK2 874 aa13.84□□□□□ -0.19
GNPTAB-209ENST00000552009 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
GNPTAB-209ENST00000552009 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
GNPTAB-209ENST00000552009 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
GNPTAB-209ENST00000552009 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
GNPTAB-209ENST00000552009 PTPREP23469 700 aa13.8□□□□□ -0.2
GNPTAB-209ENST00000552009 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
GNPTAB-209ENST00000552009 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms