RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	PLEKHD1	A6NEE1	506 aa		5.25	□□□□□ -1.57
CNOT2-231	ENST00000551483	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-231	ENST00000551483	HSP90AB4P	Q58FF6	505 aa		5.25	□□□□□ -1.57
CNOT2-231	ENST00000551483	APP	P05067	770 aa		5.25	□□□□□ -1.57
CNOT2-231	ENST00000551483	CCDC82	Q8N4S0	544 aa		5.24	□□□□□ -1.57
CNOT2-231	ENST00000551483	MAFG	O15525	162 aa		5.24	□□□□□ -1.57
CNOT2-231	ENST00000551483	LAS1L	Q9Y4W2	734 aa	Known RBP	5.24	□□□□□ -1.57
CNOT2-231	ENST00000551483	CLGN	O14967	610 aa		5.23	□□□□□ -1.57
CNOT2-231	ENST00000551483	SMARCA5	O60264	1052 aa	Predicted RBP	5.23	□□□□□ -1.57
CNOT2-231	ENST00000551483	EXOC8	Q8IYI6	725 aa		5.23	□□□□□ -1.57
CNOT2-231	ENST00000551483	FBXW7	Q969H0	707 aa		5.23	□□□□□ -1.57
CNOT2-231	ENST00000551483	SOX12	O15370	315 aa		5.22	□□□□□ -1.57
CNOT2-231	ENST00000551483	TMTC2	Q8N394	836 aa		5.21	□□□□□ -1.58
CNOT2-231	ENST00000551483	PLCD3	Q8N3E9	789 aa		5.21	□□□□□ -1.58
CNOT2-231	ENST00000551483	GTF2E1	P29083	439 aa	Predicted RBP	5.21	□□□□□ -1.58
CNOT2-231	ENST00000551483	BRD1	O95696	1058 aa		5.2	□□□□□ -1.58
CNOT2-231	ENST00000551483	LOC102724159	A0A0B4J2E5	919 aa		5.2	□□□□□ -1.58
CNOT2-231	ENST00000551483	PWP2	Q15269	919 aa	Known RBP	5.2	□□□□□ -1.58
CNOT2-231	ENST00000551483	ZNF622	Q969S3	477 aa	Known RBP eCLIP	5.2	□□□□□ -1.58	5e-6	■■□□□ 13.4
CNOT2-231	ENST00000551483	PHF14	O94880	888 aa		5.19	□□□□□ -1.58
CNOT2-231	ENST00000551483	LMOD2	Q6P5Q4	547 aa		5.19	□□□□□ -1.58
CNOT2-231	ENST00000551483	WDR70	Q9NW82	654 aa		5.18	□□□□□ -1.58
CNOT2-231	ENST00000551483	ECM2	O94769	699 aa	Predicted RBP	5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	CCDC125	Q86Z20	511 aa		5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	STAC3	Q96MF2	364 aa		5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	SLC24A3	Q9HC58	644 aa		5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	RIPOR2	Q9Y4F9	1068 aa		5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	MYH16	Q9H6N6	1097 aa		5.17	□□□□□ -1.58
CNOT2-231	ENST00000551483	HDAC5	Q9UQL6	1122 aa		5.16	□□□□□ -1.58
CNOT2-231	ENST00000551483	MARCH6	O60337	910 aa		5.16	□□□□□ -1.58
CNOT2-231	ENST00000551483	IL27	Q8NEV9	243 aa		5.16	□□□□□ -1.58
CNOT2-231	ENST00000551483	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.16	□□□□□ -1.58
CNOT2-231	ENST00000551483	RBM26	Q5T8P6	1007 aa	Known RBP	5.15	□□□□□ -1.58
CNOT2-231	ENST00000551483	FOSB	P53539	338 aa		5.15	□□□□□ -1.58
CNOT2-231	ENST00000551483	GORAB	Q5T7V8	394 aa		5.15	□□□□□ -1.58
CNOT2-231	ENST00000551483	CHGA	P10645	457 aa	Known RBP	5.15	□□□□□ -1.59
CNOT2-231	ENST00000551483	RBM27	Q9P2N5	1060 aa	Known RBP	5.15	□□□□□ -1.59
CNOT2-231	ENST00000551483	IFNLR1	Q8IU57	520 aa	Predicted RBP	5.15	□□□□□ -1.59
CNOT2-231	ENST00000551483	SGSM3	Q96HU1	749 aa		5.15	□□□□□ -1.59
CNOT2-231	ENST00000551483	IRX3	P78415	501 aa	Predicted RBP	5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	CDCA8	Q53HL2	280 aa		5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	RRP9	O43818	475 aa	Known RBP	5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	ANP32B	Q92688	251 aa	Known RBP	5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	ANKRD13A	Q8IZ07	590 aa		5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	SPINK5	Q9NQ38	1064 aa	Predicted RBP	5.14	□□□□□ -1.59
CNOT2-231	ENST00000551483	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.13	□□□□□ -1.59
CNOT2-231	ENST00000551483	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.13	□□□□□ -1.59
CNOT2-231	ENST00000551483	TPD52L2	O43399	206 aa	Known RBP	5.13	□□□□□ -1.59
CNOT2-231	ENST00000551483	VASP	P50552	380 aa	Predicted RBP	5.12	□□□□□ -1.59
CNOT2-231	ENST00000551483	DNAJC5	Q9H3Z4	198 aa		5.12	□□□□□ -1.59
CNOT2-231	ENST00000551483	GPBP1L1	Q9HC44	474 aa	Predicted RBP	5.12	□□□□□ -1.59
CNOT2-231	ENST00000551483	TRAIP	Q9BWF2	469 aa		5.12	□□□□□ -1.59
CNOT2-231	ENST00000551483	MKRN3	Q13064	507 aa	Known RBP	5.12	□□□□□ -1.59
CNOT2-231	ENST00000551483	ANKRD62	A6NC57	917 aa		5.11	□□□□□ -1.59
CNOT2-231	ENST00000551483	ARMCX6	Q7L4S7	300 aa		5.11	□□□□□ -1.59
CNOT2-231	ENST00000551483	PEX14	O75381	377 aa		5.11	□□□□□ -1.59
CNOT2-231	ENST00000551483	CADPS	Q9ULU8	1353 aa		5.11	□□□□□ -1.59
CNOT2-231	ENST00000551483	POLD1	P28340	1107 aa		5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	RINL	Q6ZS11	566 aa		5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	TERF2IP	Q9NYB0	399 aa		5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	MYCN	P04198	464 aa	Predicted RBP	5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	CC2D1B	Q5T0F9	858 aa	Known RBP	5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	RETREG2	Q8NC44	543 aa		5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	PPME1	Q9Y570	386 aa		5.1	□□□□□ -1.59
CNOT2-231	ENST00000551483	RGL2	O15211	777 aa		5.09	□□□□□ -1.59
CNOT2-231	ENST00000551483	CASC1	Q6TDU7	716 aa		5.09	□□□□□ -1.59
CNOT2-231	ENST00000551483	ANP32C	O43423	234 aa		5.09	□□□□□ -1.59
CNOT2-231	ENST00000551483	TRIM41	Q8WV44	630 aa		5.09	□□□□□ -1.59
CNOT2-231	ENST00000551483	RALBP1	Q15311	655 aa		5.09	□□□□□ -1.6
CNOT2-231	ENST00000551483	MPND	Q8N594	471 aa		5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	TMX4	Q9H1E5	349 aa	Predicted RBP	5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	STK24	Q9Y6E0	443 aa		5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	CCER2	I3L3R5	266 aa		5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	FOXD4	Q12950	439 aa	Predicted RBP	5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	MICAL1	Q8TDZ2	1067 aa		5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	CLUAP1	Q96AJ1	413 aa		5.08	□□□□□ -1.6
CNOT2-231	ENST00000551483	ZNF830	Q96NB3	372 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	TTC36	A6NLP5	189 aa		5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	RGS3	P49796	1198 aa		5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	ARID4A	P29374	1257 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	IRF5	Q13568	498 aa		5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	HNRNPUL2	Q1KMD3	747 aa	Known RBP	5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	CCER1	Q8TC90	406 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-231	ENST00000551483	CAPN15	O75808	1086 aa		5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	SPATA32	Q96LK8	384 aa		5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	RIOK3	O14730	519 aa	Known RBP	5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	CREBRF	Q8IUR6	639 aa		5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	ZNF777	Q9ULD5	760 aa	Predicted RBP	5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	KIF4A	O95239	1232 aa		5.06	□□□□□ -1.6
CNOT2-231	ENST00000551483	SH3BP1	Q9Y3L3	701 aa		5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	NBPF11	Q86T75	865 aa		5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	NBPF1	Q3BBV0	1214 aa		5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	PNMA2	Q9UL42	364 aa		5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	VGLL3	A8MV65	326 aa		5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	TRIM44	Q96DX7	344 aa	Predicted RBP	5.05	□□□□□ -1.6
CNOT2-231	ENST00000551483	SH3BP5	O60239	455 aa		5.04	□□□□□ -1.6
CNOT2-231	ENST00000551483	HSP90AA1	P07900	732 aa	Known RBP	5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms