RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
CNOT2-229ENST00000551179 CDK13Q14004 1512 aaKnown RBP14.88□□□□□ -0.03
CNOT2-229ENST00000551179 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
CNOT2-229ENST00000551179 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
CNOT2-229ENST00000551179 TCOF1Q13428 1488 aaKnown RBP14.87□□□□□ -0.03
CNOT2-229ENST00000551179 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
CNOT2-229ENST00000551179 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
CNOT2-229ENST00000551179 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
CNOT2-229ENST00000551179 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
CNOT2-229ENST00000551179 ITSN2Q9NZM3 1697 aa14.83□□□□□ -0.04
CNOT2-229ENST00000551179 AKNAQ7Z591 1439 aa14.83□□□□□ -0.04
CNOT2-229ENST00000551179 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
CNOT2-229ENST00000551179 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
CNOT2-229ENST00000551179 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
CNOT2-229ENST00000551179 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
CNOT2-229ENST00000551179 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
CNOT2-229ENST00000551179 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
CNOT2-229ENST00000551179 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
CNOT2-229ENST00000551179 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
CNOT2-229ENST00000551179 KIF14Q15058 1648 aa14.76□□□□□ -0.05
CNOT2-229ENST00000551179 CHD1O14646 1710 aa14.75□□□□□ -0.05
CNOT2-229ENST00000551179 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CNOT2-229ENST00000551179 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
CNOT2-229ENST00000551179 NAIPQ13075 1403 aa14.74□□□□□ -0.05
CNOT2-229ENST00000551179 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
CNOT2-229ENST00000551179 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
CNOT2-229ENST00000551179 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
CNOT2-229ENST00000551179 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
CNOT2-229ENST00000551179 PTPRGP23470 1445 aa14.71□□□□□ -0.05
CNOT2-229ENST00000551179 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
CNOT2-229ENST00000551179 TONSLQ96HA7 1378 aa14.71□□□□□ -0.06
CNOT2-229ENST00000551179 DAPK1P53355 1430 aa14.7□□□□□ -0.06
CNOT2-229ENST00000551179 PTPRKQ15262 1439 aa14.68□□□□□ -0.06
CNOT2-229ENST00000551179 ABCB7O75027 752 aa14.68□□□□□ -0.06
CNOT2-229ENST00000551179 DSG3P32926 999 aa14.68□□□□□ -0.06
CNOT2-229ENST00000551179 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
CNOT2-229ENST00000551179 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
CNOT2-229ENST00000551179 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
CNOT2-229ENST00000551179 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CNOT2-229ENST00000551179 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
CNOT2-229ENST00000551179 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
CNOT2-229ENST00000551179 RRP7BPQ9NSQ0 103 aa14.64□□□□□ -0.07
CNOT2-229ENST00000551179 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
CNOT2-229ENST00000551179 POLA2Q14181 598 aa14.63□□□□□ -0.07
CNOT2-229ENST00000551179 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
CNOT2-229ENST00000551179 ABCC5O15440 1437 aa14.62□□□□□ -0.07
CNOT2-229ENST00000551179 ATP10BO94823 1461 aa14.62□□□□□ -0.07
CNOT2-229ENST00000551179 CROCC2H7BZ55 1655 aa14.61□□□□□ -0.07
CNOT2-229ENST00000551179 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
CNOT2-229ENST00000551179 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
CNOT2-229ENST00000551179 ADGRL2O95490 1459 aa14.59□□□□□ -0.07
CNOT2-229ENST00000551179 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
CNOT2-229ENST00000551179 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
CNOT2-229ENST00000551179 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
CNOT2-229ENST00000551179 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
CNOT2-229ENST00000551179 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
CNOT2-229ENST00000551179 CDC42BPAQ5VT25 1732 aa14.56□□□□□ -0.08
CNOT2-229ENST00000551179 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
CNOT2-229ENST00000551179 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
CNOT2-229ENST00000551179 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
CNOT2-229ENST00000551179 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
CNOT2-229ENST00000551179 ARHGEF5Q12774 1597 aa14.53□□□□□ -0.08
CNOT2-229ENST00000551179 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
CNOT2-229ENST00000551179 C9orf84Q5VXU9 1444 aa14.52□□□□□ -0.08
CNOT2-229ENST00000551179 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
CNOT2-229ENST00000551179 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
CNOT2-229ENST00000551179 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-229ENST00000551179 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-229ENST00000551179 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
CNOT2-229ENST00000551179 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
CNOT2-229ENST00000551179 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
CNOT2-229ENST00000551179 KDM6BO15054 1643 aa14.49□□□□□ -0.09
CNOT2-229ENST00000551179 MIER1Q8N108 512 aa14.48□□□□□ -0.09
CNOT2-229ENST00000551179 MYO5CQ9NQX4 1742 aa14.48□□□□□ -0.09
CNOT2-229ENST00000551179 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
CNOT2-229ENST00000551179 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
CNOT2-229ENST00000551179 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
CNOT2-229ENST00000551179 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
CNOT2-229ENST00000551179 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
CNOT2-229ENST00000551179 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
CNOT2-229ENST00000551179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.43□□□□□ -0.13e-8■■■□□ 17.7
CNOT2-229ENST00000551179 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
CNOT2-229ENST00000551179 MAST1Q9Y2H9 1570 aa14.43□□□□□ -0.1
CNOT2-229ENST00000551179 KIAA1107Q9UPP5 1409 aa14.42□□□□□ -0.1
CNOT2-229ENST00000551179 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
CNOT2-229ENST00000551179 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
CNOT2-229ENST00000551179 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
CNOT2-229ENST00000551179 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
CNOT2-229ENST00000551179 CDC42BPBQ9Y5S2 1711 aa14.41□□□□□ -0.1
CNOT2-229ENST00000551179 ANKRD30BQ9BXX2 1392 aa14.4□□□□□ -0.1
CNOT2-229ENST00000551179 PZPP20742 1482 aa14.39□□□□□ -0.11
CNOT2-229ENST00000551179 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
CNOT2-229ENST00000551179 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-229ENST00000551179 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
CNOT2-229ENST00000551179 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
CNOT2-229ENST00000551179 NUP155O75694 1391 aa14.37□□□□□ -0.11
CNOT2-229ENST00000551179 HNRNPMP52272 730 aaKnown RBP eCLIP14.37□□□□□ -0.112e-8■■■■□ 24.1
CNOT2-229ENST00000551179 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
CNOT2-229ENST00000551179 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
CNOT2-229ENST00000551179 PLCH2O75038 1416 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms