RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
LETMD1-226ENST00000550755 SNPHO15079 494 aa13.82□□□□□ -0.2
LETMD1-226ENST00000550755 PDE4AP27815 886 aa13.82□□□□□ -0.2
LETMD1-226ENST00000550755 C2orf72A6NCS6 295 aa13.81□□□□□ -0.2
LETMD1-226ENST00000550755 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-226ENST00000550755 KIF3CO14782 793 aa13.77□□□□□ -0.21
LETMD1-226ENST00000550755 CRISPLD2Q9H0B8 497 aa13.76□□□□□ -0.21
LETMD1-226ENST00000550755 CADPS2Q86UW7 1296 aa13.75□□□□□ -0.21
LETMD1-226ENST00000550755 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-226ENST00000550755 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
LETMD1-226ENST00000550755 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
LETMD1-226ENST00000550755 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
LETMD1-226ENST00000550755 FOXK1P85037 733 aa13.72□□□□□ -0.21
LETMD1-226ENST00000550755 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
LETMD1-226ENST00000550755 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
LETMD1-226ENST00000550755 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
LETMD1-226ENST00000550755 DSG2Q14126 1118 aa13.69□□□□□ -0.22
LETMD1-226ENST00000550755 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
LETMD1-226ENST00000550755 PPP1R15BQ5SWA1 713 aa13.68□□□□□ -0.22
LETMD1-226ENST00000550755 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
LETMD1-226ENST00000550755 WDR70Q9NW82 654 aa13.68□□□□□ -0.22
LETMD1-226ENST00000550755 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
LETMD1-226ENST00000550755 MFSD10Q14728 455 aa13.64□□□□□ -0.23
LETMD1-226ENST00000550755 HOXB3P14651 431 aaPredicted RBP13.62□□□□□ -0.23
LETMD1-226ENST00000550755 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
LETMD1-226ENST00000550755 SLC34A2O95436 690 aa13.58□□□□□ -0.24
LETMD1-226ENST00000550755 ST18O60284 1047 aa13.56□□□□□ -0.24
LETMD1-226ENST00000550755 TBC1D12O60347 775 aa13.56□□□□□ -0.24
LETMD1-226ENST00000550755 PTCD2Q8WV60 388 aaKnown RBP13.52□□□□□ -0.25
LETMD1-226ENST00000550755 E2F4Q16254 413 aa13.51□□□□□ -0.25
LETMD1-226ENST00000550755 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
LETMD1-226ENST00000550755 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
LETMD1-226ENST00000550755 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
LETMD1-226ENST00000550755 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
LETMD1-226ENST00000550755 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
LETMD1-226ENST00000550755 GPR153Q6NV75 609 aa13.48□□□□□ -0.25
LETMD1-226ENST00000550755 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
LETMD1-226ENST00000550755 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
LETMD1-226ENST00000550755 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
LETMD1-226ENST00000550755 EMP3P54852 163 aa13.46□□□□□ -0.25
LETMD1-226ENST00000550755 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
LETMD1-226ENST00000550755 LCE2DQ5TA82 110 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-226ENST00000550755 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
LETMD1-226ENST00000550755 EMILIN3Q9NT22 766 aa13.43□□□□□ -0.26
LETMD1-226ENST00000550755 NUDT7P0C024 238 aa13.42□□□□□ -0.26
LETMD1-226ENST00000550755 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
LETMD1-226ENST00000550755 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.269e-6■■□□□ 14.4
LETMD1-226ENST00000550755 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
LETMD1-226ENST00000550755 DPYSL4O14531 572 aa13.38□□□□□ -0.27
LETMD1-226ENST00000550755 ERBB3P21860 1342 aa13.38□□□□□ -0.27
LETMD1-226ENST00000550755 POTEMA6NI47 508 aa13.36□□□□□ -0.27
LETMD1-226ENST00000550755 EVI5O60447 810 aa13.36□□□□□ -0.27
LETMD1-226ENST00000550755 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
LETMD1-226ENST00000550755 FAM205CA6NFA0 338 aa13.34□□□□□ -0.27
LETMD1-226ENST00000550755 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
LETMD1-226ENST00000550755 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
LETMD1-226ENST00000550755 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
LETMD1-226ENST00000550755 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
LETMD1-226ENST00000550755 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
LETMD1-226ENST00000550755 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
LETMD1-226ENST00000550755 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
LETMD1-226ENST00000550755 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
LETMD1-226ENST00000550755 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
LETMD1-226ENST00000550755 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
LETMD1-226ENST00000550755 HS3ST6Q96QI5 342 aa13.28□□□□□ -0.28
LETMD1-226ENST00000550755 PDIA6Q15084 440 aa13.27□□□□□ -0.29
LETMD1-226ENST00000550755 PPP4R3BQ5MIZ7 849 aa13.24□□□□□ -0.29
LETMD1-226ENST00000550755 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
LETMD1-226ENST00000550755 JPH4Q96JJ6 628 aa13.21□□□□□ -0.29
LETMD1-226ENST00000550755 PTGER2P43116 358 aa13.18□□□□□ -0.3
LETMD1-226ENST00000550755 FOSBP53539 338 aa13.18□□□□□ -0.3
LETMD1-226ENST00000550755 ZNF687Q8N1G0 1237 aa13.18□□□□□ -0.3
LETMD1-226ENST00000550755 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
LETMD1-226ENST00000550755 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
LETMD1-226ENST00000550755 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
LETMD1-226ENST00000550755 DDX12PQ92771 950 aa13.17□□□□□ -0.3
LETMD1-226ENST00000550755 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
LETMD1-226ENST00000550755 PHF14O94880 888 aa13.16□□□□□ -0.3
LETMD1-226ENST00000550755 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
LETMD1-226ENST00000550755 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
LETMD1-226ENST00000550755 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
LETMD1-226ENST00000550755 EPAS1Q99814 870 aa13.15□□□□□ -0.3
LETMD1-226ENST00000550755 GRXCR2A6NFK2 248 aa13.14□□□□□ -0.31
LETMD1-226ENST00000550755 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
LETMD1-226ENST00000550755 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
LETMD1-226ENST00000550755 PBX2P40425 430 aa13.12□□□□□ -0.31
LETMD1-226ENST00000550755 NBR1Q14596 966 aa13.11□□□□□ -0.31
LETMD1-226ENST00000550755 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
LETMD1-226ENST00000550755 SEMA3EO15041 775 aa13.08□□□□□ -0.32
LETMD1-226ENST00000550755 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
LETMD1-226ENST00000550755 PTPREP23469 700 aa13.07□□□□□ -0.32
LETMD1-226ENST00000550755 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
LETMD1-226ENST00000550755 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
LETMD1-226ENST00000550755 ADAM33Q9BZ11 813 aa13.06□□□□□ -0.32
LETMD1-226ENST00000550755 KCNK17Q96T54 332 aa13.05□□□□□ -0.32
LETMD1-226ENST00000550755 MAP3K7O43318 606 aa13.04□□□□□ -0.32
LETMD1-226ENST00000550755 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-226ENST00000550755 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
LETMD1-226ENST00000550755 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
LETMD1-226ENST00000550755 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms