RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 PODXL2Q9NZ53 605 aa8.76□□□□□ -1.01
TMEM116-211ENST00000550233 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
TMEM116-211ENST00000550233 KDM4CQ9H3R0 1056 aa8.74□□□□□ -1.01
TMEM116-211ENST00000550233 CLCN6P51797 869 aa8.72□□□□□ -1.01
TMEM116-211ENST00000550233 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
TMEM116-211ENST00000550233 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-211ENST00000550233 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-211ENST00000550233 TRIM66O15016 1216 aa8.7□□□□□ -1.02
TMEM116-211ENST00000550233 PDE4DQ08499 809 aa8.69□□□□□ -1.02
TMEM116-211ENST00000550233 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
TMEM116-211ENST00000550233 ZRANB1Q9UGI0 708 aa8.69□□□□□ -1.02
TMEM116-211ENST00000550233 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
TMEM116-211ENST00000550233 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
TMEM116-211ENST00000550233 MAP3K13O43283 966 aa8.67□□□□□ -1.02
TMEM116-211ENST00000550233 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
TMEM116-211ENST00000550233 FLIIQ13045 1269 aa8.65□□□□□ -1.02
TMEM116-211ENST00000550233 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
TMEM116-211ENST00000550233 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
TMEM116-211ENST00000550233 MLLT3P42568 568 aaPredicted RBP8.64□□□□□ -1.03
TMEM116-211ENST00000550233 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
TMEM116-211ENST00000550233 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
TMEM116-211ENST00000550233 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
TMEM116-211ENST00000550233 PDIA6Q15084 440 aa8.61□□□□□ -1.03
TMEM116-211ENST00000550233 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-211ENST00000550233 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
TMEM116-211ENST00000550233 ZNF316A6NFI3 1004 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-211ENST00000550233 MKRN3Q13064 507 aaKnown RBP8.59□□□□□ -1.03
TMEM116-211ENST00000550233 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
TMEM116-211ENST00000550233 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-211ENST00000550233 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
TMEM116-211ENST00000550233 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
TMEM116-211ENST00000550233 DPYSL4O14531 572 aa8.56□□□□□ -1.04
TMEM116-211ENST00000550233 AMHR2Q16671 573 aa8.56□□□□□ -1.04
TMEM116-211ENST00000550233 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
TMEM116-211ENST00000550233 GPR37O15354 613 aa8.53□□□□□ -1.04
TMEM116-211ENST00000550233 GALR2O43603 387 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-211ENST00000550233 ARID3AQ99856 593 aa8.53□□□□□ -1.04
TMEM116-211ENST00000550233 APBB1O00213 710 aa8.52□□□□□ -1.05
TMEM116-211ENST00000550233 IRF6O14896 467 aa8.52□□□□□ -1.05
TMEM116-211ENST00000550233 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
TMEM116-211ENST00000550233 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
TMEM116-211ENST00000550233 A6NJR5 290 aa8.51□□□□□ -1.05
TMEM116-211ENST00000550233 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
TMEM116-211ENST00000550233 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 ZBTB7CA1YPR0 619 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 GNPATO15228 680 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
TMEM116-211ENST00000550233 FOXK1P85037 733 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 HIC1Q14526 733 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 ILDR1Q86SU0 546 aaPredicted RBP8.5□□□□□ -1.05
TMEM116-211ENST00000550233 TMC2Q8TDI7 906 aa8.5□□□□□ -1.05
TMEM116-211ENST00000550233 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
TMEM116-211ENST00000550233 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
TMEM116-211ENST00000550233 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
TMEM116-211ENST00000550233 FCHSD2O94868 740 aa8.48□□□□□ -1.05
TMEM116-211ENST00000550233 HRCP23327 699 aa8.48□□□□□ -1.05
TMEM116-211ENST00000550233 DSG2Q14126 1118 aa8.48□□□□□ -1.05
TMEM116-211ENST00000550233 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
TMEM116-211ENST00000550233 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
TMEM116-211ENST00000550233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.05
TMEM116-211ENST00000550233 MAP3K9P80192 1104 aa8.45□□□□□ -1.06
TMEM116-211ENST00000550233 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-211ENST00000550233 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
TMEM116-211ENST00000550233 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
TMEM116-211ENST00000550233 TRAK2O60296 914 aa8.44□□□□□ -1.06
TMEM116-211ENST00000550233 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-211ENST00000550233 TIE1P35590 1138 aa8.44□□□□□ -1.06
TMEM116-211ENST00000550233 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
TMEM116-211ENST00000550233 PTGER2P43116 358 aa8.42□□□□□ -1.06
TMEM116-211ENST00000550233 PLPP6Q8IY26 295 aa8.41□□□□□ -1.06
TMEM116-211ENST00000550233 MICALL2Q8IY33 904 aa8.41□□□□□ -1.06
TMEM116-211ENST00000550233 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
TMEM116-211ENST00000550233 OSBPP22059 807 aa8.4□□□□□ -1.06
TMEM116-211ENST00000550233 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
TMEM116-211ENST00000550233 GIGYF2Q6Y7W6 1299 aaKnown RBP8.38□□□□□ -1.07
TMEM116-211ENST00000550233 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
TMEM116-211ENST00000550233 TBC1D12O60347 775 aa8.37□□□□□ -1.07
TMEM116-211ENST00000550233 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
TMEM116-211ENST00000550233 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 G3V3G9 751 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 RAD21O60216 631 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 CLCN1P35523 988 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 MCM6Q14566 821 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
TMEM116-211ENST00000550233 POTEMA6NI47 508 aa8.35□□□□□ -1.07
TMEM116-211ENST00000550233 SLC39A7Q92504 469 aa8.35□□□□□ -1.07
TMEM116-211ENST00000550233 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
TMEM116-211ENST00000550233 C7P10643 843 aa8.34□□□□□ -1.07
TMEM116-211ENST00000550233 PTGDRQ13258 359 aa8.34□□□□□ -1.07
TMEM116-211ENST00000550233 MAMSTRQ6ZN01 415 aa8.34□□□□□ -1.07
TMEM116-211ENST00000550233 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-211ENST00000550233 PELP1Q8IZL8 1130 aaKnown RBP8.34□□□□□ -1.07
TMEM116-211ENST00000550233 KCTD17Q8N5Z5 321 aa8.34□□□□□ -1.07
TMEM116-211ENST00000550233 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-211ENST00000550233 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
TMEM116-211ENST00000550233 KIF3CO14782 793 aa8.33□□□□□ -1.08
TMEM116-211ENST00000550233 SKIV2LQ15477 1246 aaKnown RBP8.33□□□□□ -1.08
TMEM116-211ENST00000550233 TMEM121BQ9BXQ6 578 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms