RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
DDX54-207ENST00000550016 LRRC9Q6ZRR7 1453 aa30.44■■■□□ 2.46
DDX54-207ENST00000550016 ARHGAP5Q13017 1502 aa30.43■■■□□ 2.46
DDX54-207ENST00000550016 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
DDX54-207ENST00000550016 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
DDX54-207ENST00000550016 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
DDX54-207ENST00000550016 ADGRL1O94910 1474 aa30.35■■■□□ 2.45
DDX54-207ENST00000550016 RICTORQ6R327 1708 aa30.34■■■□□ 2.45
DDX54-207ENST00000550016 ITSN2Q9NZM3 1697 aa30.34■■■□□ 2.45
DDX54-207ENST00000550016 DENND4BO75064 1496 aaPredicted RBP30.34■■■□□ 2.45
DDX54-207ENST00000550016 NCOA2Q15596 1464 aa30.34■■■□□ 2.45
DDX54-207ENST00000550016 RAPGEF3O95398 923 aa30.33■■■□□ 2.45
DDX54-207ENST00000550016 SCAPERQ9BY12 1400 aa30.31■■■□□ 2.44
DDX54-207ENST00000550016 FRMPD1Q5SYB0 1578 aa30.31■■■□□ 2.44
DDX54-207ENST00000550016 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
DDX54-207ENST00000550016 ZNF777Q9ULD5 760 aaPredicted RBP30.25■■■□□ 2.43
DDX54-207ENST00000550016 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
DDX54-207ENST00000550016 ABCC1P33527 1531 aa30.23■■■□□ 2.43
DDX54-207ENST00000550016 POGZQ7Z3K3 1410 aa30.22■■■□□ 2.43
DDX54-207ENST00000550016 ZMYM4Q5VZL5 1548 aa30.19■■■□□ 2.42
DDX54-207ENST00000550016 PLEKHH2Q8IVE3 1493 aa30.18■■■□□ 2.42
DDX54-207ENST00000550016 ARHGEF12Q9NZN5 1544 aa30.17■■■□□ 2.42
DDX54-207ENST00000550016 ZNF518AQ6AHZ1 1483 aa30.17■■■□□ 2.42
DDX54-207ENST00000550016 KIAA1107Q9UPP5 1409 aa30.14■■■□□ 2.42
DDX54-207ENST00000550016 AFAP1Q8N556 730 aa30.14■■■□□ 2.42
DDX54-207ENST00000550016 SYCP2Q9BX26 1530 aa30.13■■■□□ 2.41
DDX54-207ENST00000550016 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
DDX54-207ENST00000550016 MAGI2Q86UL8 1455 aa30.12■■■□□ 2.41
DDX54-207ENST00000550016 KDM5CP41229 1560 aa30.12■■■□□ 2.41
DDX54-207ENST00000550016 HNRNPMP52272 730 aaKnown RBP eCLIP30.12■■■□□ 2.41
DDX54-207ENST00000550016 ZNF644Q9H582 1327 aaPredicted RBP30.12■■■□□ 2.41
DDX54-207ENST00000550016 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
DDX54-207ENST00000550016 ZFYVE16Q7Z3T8 1539 aa30.08■■■□□ 2.41
DDX54-207ENST00000550016 ARHGEF40Q8TER5 1519 aa30.07■■■□□ 2.4
DDX54-207ENST00000550016 CAMSAP2Q08AD1 1489 aa30.07■■■□□ 2.4
DDX54-207ENST00000550016 MIA2Q96PC5 1412 aa30.07■■■□□ 2.4
DDX54-207ENST00000550016 HECW2Q9P2P5 1572 aa30.06■■■□□ 2.4
DDX54-207ENST00000550016 YEATS2Q9ULM3 1422 aa30.04■■■□□ 2.4
DDX54-207ENST00000550016 MLH3Q9UHC1 1453 aa30.03■■■□□ 2.4
DDX54-207ENST00000550016 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
DDX54-207ENST00000550016 MYT1LQ9UL68 1186 aa30.02■■■□□ 2.4
DDX54-207ENST00000550016 KIDINS220Q9ULH0 1771 aa30■■■□□ 2.39
DDX54-207ENST00000550016 RSPH4AQ5TD94 716 aa29.98■■■□□ 2.39
DDX54-207ENST00000550016 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
DDX54-207ENST00000550016 PTPN23Q9H3S7 1636 aa29.96■■■□□ 2.39
DDX54-207ENST00000550016 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
DDX54-207ENST00000550016 ATP10AO60312 1499 aa29.96■■■□□ 2.39
DDX54-207ENST00000550016 PPARGC1BQ86YN6 1023 aaKnown RBP29.96■■■□□ 2.39
DDX54-207ENST00000550016 FGD6Q6ZV73 1430 aa29.96■■■□□ 2.39
DDX54-207ENST00000550016 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
DDX54-207ENST00000550016 ABCA6Q8N139 1617 aa29.93■■■□□ 2.38
DDX54-207ENST00000550016 CCDC141Q6ZP82 1450 aa29.93■■■□□ 2.38
DDX54-207ENST00000550016 INO80Q9ULG1 1556 aaPredicted RBP29.92■■■□□ 2.38
DDX54-207ENST00000550016 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
DDX54-207ENST00000550016 C9orf84Q5VXU9 1444 aa29.9■■■□□ 2.38
DDX54-207ENST00000550016 TCOF1Q13428 1488 aaKnown RBP29.89■■■□□ 2.38
DDX54-207ENST00000550016 SIGLEC1Q9BZZ2 1709 aa29.89■■■□□ 2.38
DDX54-207ENST00000550016 ARID4BQ4LE39 1312 aaPredicted RBP29.89■■■□□ 2.38
DDX54-207ENST00000550016 KDM4FA0A1W2PPD8 638 aa29.88■■■□□ 2.37
DDX54-207ENST00000550016 RTEL1-TNFRSF6BF6WH68 1400 aa29.87■■■□□ 2.37
DDX54-207ENST00000550016 REREQ9P2R6 1566 aa29.86■■■□□ 2.37
DDX54-207ENST00000550016 TSPY4P0CV99 314 aa29.85■■■□□ 2.37
DDX54-207ENST00000550016 TSPY10P0CW01 314 aa29.85■■■□□ 2.37
DDX54-207ENST00000550016 BCORL1Q5H9F3 1711 aa29.85■■■□□ 2.37
DDX54-207ENST00000550016 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
DDX54-207ENST00000550016 CROCC2H7BZ55 1655 aa29.79■■■□□ 2.36
DDX54-207ENST00000550016 DNMT1P26358 1616 aaKnown RBP29.79■■■□□ 2.36
DDX54-207ENST00000550016 MAST1Q9Y2H9 1570 aa29.79■■■□□ 2.36
DDX54-207ENST00000550016 ADAMTSL3P82987 1691 aa29.79■■■□□ 2.36
DDX54-207ENST00000550016 FAM50AQ14320 339 aaKnown RBP29.77■■■□□ 2.36
DDX54-207ENST00000550016 ABCC5O15440 1437 aa29.76■■■□□ 2.35
DDX54-207ENST00000550016 AGLP35573 1532 aa29.76■■■□□ 2.35
DDX54-207ENST00000550016 A2MP01023 1474 aa29.74■■■□□ 2.35
DDX54-207ENST00000550016 DAPK1P53355 1430 aa29.74■■■□□ 2.35
DDX54-207ENST00000550016 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
DDX54-207ENST00000550016 SHANK2Q9UPX8 1470 aa29.71■■■□□ 2.35
DDX54-207ENST00000550016 PLXNC1O60486 1568 aa29.71■■■□□ 2.35
DDX54-207ENST00000550016 MLECQ14165 292 aa29.7■■■□□ 2.35
DDX54-207ENST00000550016 MADDQ8WXG6 1647 aa29.68■■■□□ 2.34
DDX54-207ENST00000550016 DHX29Q7Z478 1369 aaKnown RBP29.67■■■□□ 2.34
DDX54-207ENST00000550016 FER1L4A9Z1Z3 1794 aa29.67■■■□□ 2.34
DDX54-207ENST00000550016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
DDX54-207ENST00000550016 RIMS1Q86UR5 1692 aaKnown RBP29.63■■■□□ 2.33
DDX54-207ENST00000550016 RRBP1Q9P2E9 1410 aaKnown RBP29.62■■■□□ 2.33
DDX54-207ENST00000550016 CHIC2Q9UKJ5 165 aa29.6■■■□□ 2.33
DDX54-207ENST00000550016 DUOX2Q9NRD8 1548 aa29.57■■■□□ 2.32
DDX54-207ENST00000550016 ANKRD30AQ9BXX3 1397 aa29.57■■■□□ 2.32
DDX54-207ENST00000550016 PTPRMP28827 1452 aa29.56■■■□□ 2.32
DDX54-207ENST00000550016 RRP7BPQ9NSQ0 103 aa29.56■■■□□ 2.32
DDX54-207ENST00000550016 KIF15Q9NS87 1388 aa29.55■■■□□ 2.32
DDX54-207ENST00000550016 ADGRL2O95490 1459 aa29.55■■■□□ 2.32
DDX54-207ENST00000550016 NCOA1Q15788 1441 aa29.54■■■□□ 2.32
DDX54-207ENST00000550016 KIF3BO15066 747 aa29.54■■■□□ 2.32
DDX54-207ENST00000550016 PTPRKQ15262 1439 aa29.53■■■□□ 2.32
DDX54-207ENST00000550016 EIF2AK4Q9P2K8 1649 aaKnown RBP29.53■■■□□ 2.32
DDX54-207ENST00000550016 GGT6Q6P531 493 aa29.52■■■□□ 2.32
DDX54-207ENST00000550016 ESF1Q9H501 851 aaKnown RBP29.51■■■□□ 2.31
DDX54-207ENST00000550016 ITGAEP38570 1179 aa29.5■■■□□ 2.31
DDX54-207ENST00000550016 PPP6R1Q9UPN7 881 aa29.49■■■□□ 2.31
DDX54-207ENST00000550016 ERBINQ96RT1 1412 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms