RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CDC42BPAQ5VT25 1732 aa26.39■■□□□ 1.81
LETMD1-220ENST00000549686 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
LETMD1-220ENST00000549686 ARHGAP5Q13017 1502 aa26.35■■□□□ 1.81
LETMD1-220ENST00000549686 EFCAB2Q5VUJ9 269 aa26.35■■□□□ 1.81
LETMD1-220ENST00000549686 CD109Q6YHK3 1445 aa26.34■■□□□ 1.81
LETMD1-220ENST00000549686 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
LETMD1-220ENST00000549686 PLEKHH2Q8IVE3 1493 aa26.32■■□□□ 1.8
LETMD1-220ENST00000549686 DIP2BQ9P265 1576 aa26.32■■□□□ 1.8
LETMD1-220ENST00000549686 ZNF777Q9ULD5 760 aaPredicted RBP26.3■■□□□ 1.8
LETMD1-220ENST00000549686 CDC42BPBQ9Y5S2 1711 aa26.3■■□□□ 1.8
LETMD1-220ENST00000549686 FAM69CQ0P6D2 419 aa26.29■■□□□ 1.8
LETMD1-220ENST00000549686 KIAA1107Q9UPP5 1409 aa26.28■■□□□ 1.8
LETMD1-220ENST00000549686 RSPH4AQ5TD94 716 aa26.27■■□□□ 1.8
LETMD1-220ENST00000549686 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
LETMD1-220ENST00000549686 FANCAO15360 1455 aa26.26■■□□□ 1.79
LETMD1-220ENST00000549686 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
LETMD1-220ENST00000549686 SAMD9LQ8IVG5 1584 aa26.24■■□□□ 1.79
LETMD1-220ENST00000549686 CFAP74Q9C0B2 1584 aa26.23■■□□□ 1.79
LETMD1-220ENST00000549686 NEO1Q92859 1461 aa26.2■■□□□ 1.78
LETMD1-220ENST00000549686 DAPK1P53355 1430 aa26.2■■□□□ 1.78
LETMD1-220ENST00000549686 ARHGEF5Q12774 1597 aa26.2■■□□□ 1.78
LETMD1-220ENST00000549686 DNMT1P26358 1616 aaKnown RBP26.19■■□□□ 1.78
LETMD1-220ENST00000549686 ITGAEP38570 1179 aa26.19■■□□□ 1.78
LETMD1-220ENST00000549686 MBD5Q9P267 1494 aa26.18■■□□□ 1.78
LETMD1-220ENST00000549686 ABCC5O15440 1437 aa26.18■■□□□ 1.78
LETMD1-220ENST00000549686 ABCC1P33527 1531 aa26.18■■□□□ 1.78
LETMD1-220ENST00000549686 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
LETMD1-220ENST00000549686 AKNAQ7Z591 1439 aa26.16■■□□□ 1.78
LETMD1-220ENST00000549686 CCDC141Q6ZP82 1450 aa26.16■■□□□ 1.78
LETMD1-220ENST00000549686 SHANK2Q9UPX8 1470 aa26.15■■□□□ 1.78
LETMD1-220ENST00000549686 SYCP2Q9BX26 1530 aa26.14■■□□□ 1.78
LETMD1-220ENST00000549686 HNRNPMP52272 730 aaKnown RBP eCLIP26.14■■□□□ 1.78
LETMD1-220ENST00000549686 ADGRL1O94910 1474 aa26.13■■□□□ 1.77
LETMD1-220ENST00000549686 TSPY4P0CV99 314 aa26.13■■□□□ 1.77
LETMD1-220ENST00000549686 TSPY10P0CW01 314 aa26.13■■□□□ 1.77
LETMD1-220ENST00000549686 PTPRKQ15262 1439 aa26.12■■□□□ 1.77
LETMD1-220ENST00000549686 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
LETMD1-220ENST00000549686 KIF13AQ9H1H9 1805 aa26.1■■□□□ 1.77
LETMD1-220ENST00000549686 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
LETMD1-220ENST00000549686 SCAPERQ9BY12 1400 aa26.09■■□□□ 1.77
LETMD1-220ENST00000549686 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
LETMD1-220ENST00000549686 CROCC2H7BZ55 1655 aa26.06■■□□□ 1.76
LETMD1-220ENST00000549686 ADGRL2O95490 1459 aa26.05■■□□□ 1.76
LETMD1-220ENST00000549686 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
LETMD1-220ENST00000549686 ANKRD30AQ9BXX3 1397 aa26.04■■□□□ 1.76
LETMD1-220ENST00000549686 TRAPPC8Q9Y2L5 1435 aa26.04■■□□□ 1.76
LETMD1-220ENST00000549686 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
LETMD1-220ENST00000549686 ZNF518AQ6AHZ1 1483 aa26.03■■□□□ 1.76
LETMD1-220ENST00000549686 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
LETMD1-220ENST00000549686 DENND4BO75064 1496 aaPredicted RBP26.02■■□□□ 1.76
LETMD1-220ENST00000549686 PPRC1Q5VV67 1664 aaKnown RBP26.02■■□□□ 1.76
LETMD1-220ENST00000549686 TRHP20396 242 aaPredicted RBP26.01■■□□□ 1.75
LETMD1-220ENST00000549686 POGZQ7Z3K3 1410 aa26.01■■□□□ 1.75
LETMD1-220ENST00000549686 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
LETMD1-220ENST00000549686 RTEL1-TNFRSF6BF6WH68 1400 aa26■■□□□ 1.75
LETMD1-220ENST00000549686 NCOA1Q15788 1441 aa26■■□□□ 1.75
LETMD1-220ENST00000549686 HRCP23327 699 aa25.99■■□□□ 1.75
LETMD1-220ENST00000549686 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
LETMD1-220ENST00000549686 NAIPQ13075 1403 aa25.97■■□□□ 1.75
LETMD1-220ENST00000549686 ADGBQ8N7X0 1667 aa25.97■■□□□ 1.75
LETMD1-220ENST00000549686 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
LETMD1-220ENST00000549686 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
LETMD1-220ENST00000549686 TSPOAP1O95153 1857 aa25.94■■□□□ 1.74
LETMD1-220ENST00000549686 RRP7BPQ9NSQ0 103 aa25.94■■□□□ 1.74
LETMD1-220ENST00000549686 KDM5CP41229 1560 aa25.93■■□□□ 1.74
LETMD1-220ENST00000549686 PLXNC1O60486 1568 aa25.91■■□□□ 1.74
LETMD1-220ENST00000549686 RAB3GAP2Q9H2M9 1393 aa25.91■■□□□ 1.74
LETMD1-220ENST00000549686 KIF15Q9NS87 1388 aa25.91■■□□□ 1.74
LETMD1-220ENST00000549686 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
LETMD1-220ENST00000549686 GCC2Q8IWJ2 1684 aa25.9■■□□□ 1.74
LETMD1-220ENST00000549686 ZFYVE16Q7Z3T8 1539 aa25.89■■□□□ 1.74
LETMD1-220ENST00000549686 INO80Q9ULG1 1556 aaPredicted RBP25.88■■□□□ 1.73
LETMD1-220ENST00000549686 ATP7AQ04656 1500 aa25.88■■□□□ 1.73
LETMD1-220ENST00000549686 RAPGEF3O95398 923 aa25.86■■□□□ 1.73
LETMD1-220ENST00000549686 ANKRD50Q9ULJ7 1429 aa25.85■■□□□ 1.73
LETMD1-220ENST00000549686 ZMYM4Q5VZL5 1548 aa25.84■■□□□ 1.73
LETMD1-220ENST00000549686 RICTORQ6R327 1708 aa25.84■■□□□ 1.73
LETMD1-220ENST00000549686 HECW2Q9P2P5 1572 aa25.84■■□□□ 1.73
LETMD1-220ENST00000549686 MAGI2Q86UL8 1455 aa25.84■■□□□ 1.73
LETMD1-220ENST00000549686 DUOX2Q9NRD8 1548 aa25.83■■□□□ 1.73
LETMD1-220ENST00000549686 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.73
LETMD1-220ENST00000549686 FRMPD1Q5SYB0 1578 aa25.81■■□□□ 1.72
LETMD1-220ENST00000549686 ERBINQ96RT1 1412 aa25.8■■□□□ 1.72
LETMD1-220ENST00000549686 KIDINS220Q9ULH0 1771 aa25.77■■□□□ 1.72
LETMD1-220ENST00000549686 COL17A1Q9UMD9 1497 aaPredicted RBP25.76■■□□□ 1.71
LETMD1-220ENST00000549686 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
LETMD1-220ENST00000549686 A2MP01023 1474 aa25.72■■□□□ 1.71
LETMD1-220ENST00000549686 KDM6BO15054 1643 aa25.7■■□□□ 1.71
LETMD1-220ENST00000549686 DIP2CQ9Y2E4 1556 aa25.68■■□□□ 1.7
LETMD1-220ENST00000549686 ABCA6Q8N139 1617 aa25.67■■□□□ 1.7
LETMD1-220ENST00000549686 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
LETMD1-220ENST00000549686 TRIM52Q96A61 297 aa25.67■■□□□ 1.7
LETMD1-220ENST00000549686 DHX57Q6P158 1386 aaKnown RBP25.67■■□□□ 1.7
LETMD1-220ENST00000549686 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
LETMD1-220ENST00000549686 YEATS2Q9ULM3 1422 aa25.66■■□□□ 1.7
LETMD1-220ENST00000549686 ATP10AO60312 1499 aa25.66■■□□□ 1.7
LETMD1-220ENST00000549686 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
LETMD1-220ENST00000549686 REREQ9P2R6 1566 aa25.63■■□□□ 1.69
LETMD1-220ENST00000549686 ARHGEF40Q8TER5 1519 aa25.63■■□□□ 1.69
LETMD1-220ENST00000549686 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms