RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 PLCH2O75038 1416 aa18.68■□□□□ 0.58
ERBB3-208ENST00000549205 TCOF1Q13428 1488 aaKnown RBP18.68■□□□□ 0.58
ERBB3-208ENST00000549205 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
ERBB3-208ENST00000549205 ARHGAP5Q13017 1502 aa18.67■□□□□ 0.58
ERBB3-208ENST00000549205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.66■□□□□ 0.58
ERBB3-208ENST00000549205 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
ERBB3-208ENST00000549205 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.57
ERBB3-208ENST00000549205 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
ERBB3-208ENST00000549205 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
ERBB3-208ENST00000549205 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
ERBB3-208ENST00000549205 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
ERBB3-208ENST00000549205 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
ERBB3-208ENST00000549205 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
ERBB3-208ENST00000549205 FANCAO15360 1455 aa18.59■□□□□ 0.57
ERBB3-208ENST00000549205 EFCAB2Q5VUJ9 269 aa18.59■□□□□ 0.57
ERBB3-208ENST00000549205 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
ERBB3-208ENST00000549205 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
ERBB3-208ENST00000549205 PPRC1Q5VV67 1664 aaKnown RBP18.59■□□□□ 0.57
ERBB3-208ENST00000549205 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
ERBB3-208ENST00000549205 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.56
ERBB3-208ENST00000549205 CROCC2H7BZ55 1655 aa18.57■□□□□ 0.56
ERBB3-208ENST00000549205 ARHGEF5Q12774 1597 aa18.56■□□□□ 0.56
ERBB3-208ENST00000549205 ABCC1P33527 1531 aa18.56■□□□□ 0.56
ERBB3-208ENST00000549205 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
ERBB3-208ENST00000549205 KIAA1107Q9UPP5 1409 aa18.54■□□□□ 0.56
ERBB3-208ENST00000549205 NEO1Q92859 1461 aa18.53■□□□□ 0.56
ERBB3-208ENST00000549205 MBD5Q9P267 1494 aa18.52■□□□□ 0.55
ERBB3-208ENST00000549205 DAPK1P53355 1430 aa18.51■□□□□ 0.55
ERBB3-208ENST00000549205 AKNAQ7Z591 1439 aa18.51■□□□□ 0.55
ERBB3-208ENST00000549205 ADGRL1O94910 1474 aa18.51■□□□□ 0.55
ERBB3-208ENST00000549205 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
ERBB3-208ENST00000549205 ABCC5O15440 1437 aa18.5■□□□□ 0.55
ERBB3-208ENST00000549205 ARHGEF12Q9NZN5 1544 aa18.5■□□□□ 0.55
ERBB3-208ENST00000549205 ITGAEP38570 1179 aa18.5■□□□□ 0.55
ERBB3-208ENST00000549205 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
ERBB3-208ENST00000549205 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
ERBB3-208ENST00000549205 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
ERBB3-208ENST00000549205 HNRNPMP52272 730 aaKnown RBP eCLIP18.48■□□□□ 0.55
ERBB3-208ENST00000549205 SHANK2Q9UPX8 1470 aa18.47■□□□□ 0.55
ERBB3-208ENST00000549205 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.55
ERBB3-208ENST00000549205 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
ERBB3-208ENST00000549205 MAST1Q9Y2H9 1570 aa18.45■□□□□ 0.54
ERBB3-208ENST00000549205 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
ERBB3-208ENST00000549205 RICTORQ6R327 1708 aa18.43■□□□□ 0.54
ERBB3-208ENST00000549205 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
ERBB3-208ENST00000549205 C9orf84Q5VXU9 1444 aa18.42■□□□□ 0.54
ERBB3-208ENST00000549205 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
ERBB3-208ENST00000549205 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
ERBB3-208ENST00000549205 ROCK1Q13464 1354 aa18.41■□□□□ 0.54
ERBB3-208ENST00000549205 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
ERBB3-208ENST00000549205 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
ERBB3-208ENST00000549205 KDM5CP41229 1560 aa18.4■□□□□ 0.54
ERBB3-208ENST00000549205 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
ERBB3-208ENST00000549205 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.54
ERBB3-208ENST00000549205 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
ERBB3-208ENST00000549205 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
ERBB3-208ENST00000549205 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
ERBB3-208ENST00000549205 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
ERBB3-208ENST00000549205 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
ERBB3-208ENST00000549205 NCOA1Q15788 1441 aa18.37■□□□□ 0.53
ERBB3-208ENST00000549205 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
ERBB3-208ENST00000549205 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
ERBB3-208ENST00000549205 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
ERBB3-208ENST00000549205 ANKRD30AQ9BXX3 1397 aa18.36■□□□□ 0.53
ERBB3-208ENST00000549205 KIDINS220Q9ULH0 1771 aa18.35■□□□□ 0.53
ERBB3-208ENST00000549205 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
ERBB3-208ENST00000549205 RTEL1-TNFRSF6BF6WH68 1400 aa18.35■□□□□ 0.53
ERBB3-208ENST00000549205 NAIPQ13075 1403 aa18.35■□□□□ 0.53
ERBB3-208ENST00000549205 SPAG9O60271 1321 aaKnown RBP18.35■□□□□ 0.53
ERBB3-208ENST00000549205 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
ERBB3-208ENST00000549205 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
ERBB3-208ENST00000549205 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
ERBB3-208ENST00000549205 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
ERBB3-208ENST00000549205 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
ERBB3-208ENST00000549205 RAPGEF3O95398 923 aa18.31■□□□□ 0.52
ERBB3-208ENST00000549205 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
ERBB3-208ENST00000549205 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
ERBB3-208ENST00000549205 KDM6BO15054 1643 aa18.29■□□□□ 0.52
ERBB3-208ENST00000549205 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
ERBB3-208ENST00000549205 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
ERBB3-208ENST00000549205 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
ERBB3-208ENST00000549205 HRCP23327 699 aa18.25■□□□□ 0.51
ERBB3-208ENST00000549205 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
ERBB3-208ENST00000549205 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
ERBB3-208ENST00000549205 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
ERBB3-208ENST00000549205 MYT1LQ9UL68 1186 aa18.24■□□□□ 0.51
ERBB3-208ENST00000549205 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
ERBB3-208ENST00000549205 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.51
ERBB3-208ENST00000549205 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
ERBB3-208ENST00000549205 ARHGEF40Q8TER5 1519 aa18.19■□□□□ 0.5
ERBB3-208ENST00000549205 A2MP01023 1474 aa18.19■□□□□ 0.5
ERBB3-208ENST00000549205 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
ERBB3-208ENST00000549205 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
ERBB3-208ENST00000549205 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
ERBB3-208ENST00000549205 UNC13BO14795 1591 aa18.17■□□□□ 0.5
ERBB3-208ENST00000549205 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
ERBB3-208ENST00000549205 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
ERBB3-208ENST00000549205 ATP10AO60312 1499 aa18.15■□□□□ 0.5
ERBB3-208ENST00000549205 RNF17Q9BXT8 1623 aaKnown RBP18.13■□□□□ 0.49
ERBB3-208ENST00000549205 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms