RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 HS3ST6Q96QI5 342 aa14.71□□□□□ -0.05
CNOT2-215ENST00000548863 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
CNOT2-215ENST00000548863 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
CNOT2-215ENST00000548863 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
CNOT2-215ENST00000548863 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
CNOT2-215ENST00000548863 KIF3CO14782 793 aa14.62□□□□□ -0.07
CNOT2-215ENST00000548863 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
CNOT2-215ENST00000548863 SPNS2Q8IVW8 549 aa14.62□□□□□ -0.07
CNOT2-215ENST00000548863 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
CNOT2-215ENST00000548863 KRTAP3-3Q9BYR6 98 aa14.6□□□□□ -0.07
CNOT2-215ENST00000548863 KRTAP3-2Q9BYR7 98 aa14.6□□□□□ -0.07
CNOT2-215ENST00000548863 ERBB3P21860 1342 aa14.58□□□□□ -0.08
CNOT2-215ENST00000548863 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
CNOT2-215ENST00000548863 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
CNOT2-215ENST00000548863 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
CNOT2-215ENST00000548863 PPP1R37O75864 691 aa14.52□□□□□ -0.09
CNOT2-215ENST00000548863 VARS2Q5ST30 1063 aaKnown RBP14.49□□□□□ -0.09
CNOT2-215ENST00000548863 SLC34A2O95436 690 aa14.48□□□□□ -0.09
CNOT2-215ENST00000548863 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
CNOT2-215ENST00000548863 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
CNOT2-215ENST00000548863 TMC2Q8TDI7 906 aa14.47□□□□□ -0.09
CNOT2-215ENST00000548863 ZNF687Q8N1G0 1237 aa14.45□□□□□ -0.1
CNOT2-215ENST00000548863 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
CNOT2-215ENST00000548863 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.111e-8■■■□□ 15.6
CNOT2-215ENST00000548863 RYDENQ9NUL5 291 aaKnown RBP14.39□□□□□ -0.11
CNOT2-215ENST00000548863 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-215ENST00000548863 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
CNOT2-215ENST00000548863 PCDHGA4Q9Y5G9 962 aa14.36□□□□□ -0.11
CNOT2-215ENST00000548863 FOXK1P85037 733 aa14.35□□□□□ -0.11
CNOT2-215ENST00000548863 NUDT7P0C024 238 aa14.31□□□□□ -0.12
CNOT2-215ENST00000548863 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
CNOT2-215ENST00000548863 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.13
CNOT2-215ENST00000548863 PLPP6Q8IY26 295 aa14.26□□□□□ -0.13
CNOT2-215ENST00000548863 LHX6Q9UPM6 363 aa14.26□□□□□ -0.13
CNOT2-215ENST00000548863 DSG2Q14126 1118 aa14.25□□□□□ -0.13
CNOT2-215ENST00000548863 PBX2P40425 430 aa14.23□□□□□ -0.13
CNOT2-215ENST00000548863 PTGER2P43116 358 aa14.22□□□□□ -0.13
CNOT2-215ENST00000548863 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.13
CNOT2-215ENST00000548863 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
CNOT2-215ENST00000548863 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
CNOT2-215ENST00000548863 LSM11P83369 360 aaKnown RBP eCLIP14.18□□□□□ -0.14
CNOT2-215ENST00000548863 TBC1D12O60347 775 aa14.17□□□□□ -0.14
CNOT2-215ENST00000548863 MYT1LQ9UL68 1186 aa14.17□□□□□ -0.14
CNOT2-215ENST00000548863 RNF166Q96A37 237 aaPredicted RBP14.16□□□□□ -0.14
CNOT2-215ENST00000548863 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
CNOT2-215ENST00000548863 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
CNOT2-215ENST00000548863 PDE4AP27815 886 aa14.11□□□□□ -0.15
CNOT2-215ENST00000548863 OXER1Q8TDS5 423 aa14.11□□□□□ -0.15
CNOT2-215ENST00000548863 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
CNOT2-215ENST00000548863 ARHGAP33O14559 1287 aa14.09□□□□□ -0.15
CNOT2-215ENST00000548863 PPP1R15BQ5SWA1 713 aa14.08□□□□□ -0.16
CNOT2-215ENST00000548863 AXIN2Q9Y2T1 843 aa14.07□□□□□ -0.16
CNOT2-215ENST00000548863 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
CNOT2-215ENST00000548863 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
CNOT2-215ENST00000548863 TK2O00142 265 aa14□□□□□ -0.17
CNOT2-215ENST00000548863 MFSD10Q14728 455 aa14□□□□□ -0.17
CNOT2-215ENST00000548863 ADGRD1Q6QNK2 874 aa13.99□□□□□ -0.17
CNOT2-215ENST00000548863 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
CNOT2-215ENST00000548863 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
CNOT2-215ENST00000548863 DDX27Q96GQ7 796 aaKnown RBP13.98□□□□□ -0.17
CNOT2-215ENST00000548863 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
CNOT2-215ENST00000548863 PSEN2P49810 448 aa13.94□□□□□ -0.18
CNOT2-215ENST00000548863 DMRTA1Q5VZB9 504 aa13.93□□□□□ -0.18
CNOT2-215ENST00000548863 HRO43593 1189 aa13.92□□□□□ -0.18
CNOT2-215ENST00000548863 FOSBP53539 338 aa13.9□□□□□ -0.18
CNOT2-215ENST00000548863 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
CNOT2-215ENST00000548863 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
CNOT2-215ENST00000548863 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
CNOT2-215ENST00000548863 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
CNOT2-215ENST00000548863 EVI5O60447 810 aa13.88□□□□□ -0.19
CNOT2-215ENST00000548863 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
CNOT2-215ENST00000548863 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
CNOT2-215ENST00000548863 KCNK17Q96T54 332 aa13.86□□□□□ -0.19
CNOT2-215ENST00000548863 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
CNOT2-215ENST00000548863 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
CNOT2-215ENST00000548863 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
CNOT2-215ENST00000548863 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
CNOT2-215ENST00000548863 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
CNOT2-215ENST00000548863 VPS9D1Q9Y2B5 631 aa13.81□□□□□ -0.2
CNOT2-215ENST00000548863 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
CNOT2-215ENST00000548863 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
CNOT2-215ENST00000548863 PTPREP23469 700 aa13.79□□□□□ -0.2
CNOT2-215ENST00000548863 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
CNOT2-215ENST00000548863 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
CNOT2-215ENST00000548863 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
CNOT2-215ENST00000548863 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
CNOT2-215ENST00000548863 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
CNOT2-215ENST00000548863 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
CNOT2-215ENST00000548863 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
CNOT2-215ENST00000548863 PHF14O94880 888 aa13.69□□□□□ -0.22
CNOT2-215ENST00000548863 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
CNOT2-215ENST00000548863 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CNOT2-215ENST00000548863 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
CNOT2-215ENST00000548863 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
CNOT2-215ENST00000548863 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
CNOT2-215ENST00000548863 PLA2G2EQ9NZK7 142 aa13.64□□□□□ -0.23
CNOT2-215ENST00000548863 DPYSL4O14531 572 aa13.63□□□□□ -0.23
CNOT2-215ENST00000548863 EPAS1Q99814 870 aa13.63□□□□□ -0.23
CNOT2-215ENST00000548863 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
CNOT2-215ENST00000548863 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms