RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
HDAC7-227ENST00000548080 ARAP3Q8WWN8 1544 aa27.09■■□□□ 1.93
HDAC7-227ENST00000548080 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.93
HDAC7-227ENST00000548080 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
HDAC7-227ENST00000548080 EFCAB2Q5VUJ9 269 aa27.08■■□□□ 1.93
HDAC7-227ENST00000548080 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
HDAC7-227ENST00000548080 NCOA2Q15596 1464 aa27.07■■□□□ 1.92
HDAC7-227ENST00000548080 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
HDAC7-227ENST00000548080 PHLDB1Q86UU1 1377 aa27.05■■□□□ 1.92
HDAC7-227ENST00000548080 FRMPD1Q5SYB0 1578 aa27.05■■□□□ 1.92
HDAC7-227ENST00000548080 ZNF777Q9ULD5 760 aaPredicted RBP27.04■■□□□ 1.92
HDAC7-227ENST00000548080 SCAPERQ9BY12 1400 aa27.02■■□□□ 1.92
HDAC7-227ENST00000548080 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
HDAC7-227ENST00000548080 RICTORQ6R327 1708 aa27■■□□□ 1.91
HDAC7-227ENST00000548080 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
HDAC7-227ENST00000548080 CFDP1Q9UEE9 299 aaPredicted RBP26.99■■□□□ 1.91
HDAC7-227ENST00000548080 SAMD9LQ8IVG5 1584 aa26.98■■□□□ 1.91
HDAC7-227ENST00000548080 ABCC1P33527 1531 aa26.95■■□□□ 1.9
HDAC7-227ENST00000548080 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
HDAC7-227ENST00000548080 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
HDAC7-227ENST00000548080 POGZQ7Z3K3 1410 aa26.94■■□□□ 1.9
HDAC7-227ENST00000548080 ZNF644Q9H582 1327 aaPredicted RBP26.93■■□□□ 1.9
HDAC7-227ENST00000548080 SYCP2Q9BX26 1530 aa26.91■■□□□ 1.9
HDAC7-227ENST00000548080 AFAP1Q8N556 730 aa26.89■■□□□ 1.9
HDAC7-227ENST00000548080 TRAPPC8Q9Y2L5 1435 aa26.89■■□□□ 1.9
HDAC7-227ENST00000548080 HNRNPMP52272 730 aaKnown RBP eCLIP26.88■■□□□ 1.89
HDAC7-227ENST00000548080 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
HDAC7-227ENST00000548080 ZNF518AQ6AHZ1 1483 aa26.85■■□□□ 1.89
HDAC7-227ENST00000548080 MYOM3Q5VTT5 1437 aa26.85■■□□□ 1.89
HDAC7-227ENST00000548080 CAMSAP2Q08AD1 1489 aa26.84■■□□□ 1.89
HDAC7-227ENST00000548080 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
HDAC7-227ENST00000548080 KDM5CP41229 1560 aa26.81■■□□□ 1.88
HDAC7-227ENST00000548080 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
HDAC7-227ENST00000548080 ZFYVE16Q7Z3T8 1539 aa26.81■■□□□ 1.88
HDAC7-227ENST00000548080 ARHGEF40Q8TER5 1519 aa26.81■■□□□ 1.88
HDAC7-227ENST00000548080 PLEKHH2Q8IVE3 1493 aa26.8■■□□□ 1.88
HDAC7-227ENST00000548080 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
HDAC7-227ENST00000548080 HECW2Q9P2P5 1572 aa26.77■■□□□ 1.88
HDAC7-227ENST00000548080 MBD5Q9P267 1494 aa26.75■■□□□ 1.87
HDAC7-227ENST00000548080 MIA2Q96PC5 1412 aa26.73■■□□□ 1.87
HDAC7-227ENST00000548080 PTPN23Q9H3S7 1636 aa26.73■■□□□ 1.87
HDAC7-227ENST00000548080 MAGI2Q86UL8 1455 aa26.73■■□□□ 1.87
HDAC7-227ENST00000548080 FGD6Q6ZV73 1430 aa26.72■■□□□ 1.87
HDAC7-227ENST00000548080 KIDINS220Q9ULH0 1771 aa26.72■■□□□ 1.87
HDAC7-227ENST00000548080 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
HDAC7-227ENST00000548080 SIGLEC1Q9BZZ2 1709 aa26.71■■□□□ 1.87
HDAC7-227ENST00000548080 SPAG9O60271 1321 aaKnown RBP26.7■■□□□ 1.86
HDAC7-227ENST00000548080 DIP2CQ9Y2E4 1556 aa26.7■■□□□ 1.86
HDAC7-227ENST00000548080 MLH3Q9UHC1 1453 aa26.69■■□□□ 1.86
HDAC7-227ENST00000548080 CCDC141Q6ZP82 1450 aa26.68■■□□□ 1.86
HDAC7-227ENST00000548080 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
HDAC7-227ENST00000548080 TRIM26Q12899 539 aaPredicted RBP26.67■■□□□ 1.86
HDAC7-227ENST00000548080 INO80Q9ULG1 1556 aaPredicted RBP26.66■■□□□ 1.86
HDAC7-227ENST00000548080 ATP7AQ04656 1500 aa26.66■■□□□ 1.86
HDAC7-227ENST00000548080 ARHGEF5Q12774 1597 aa26.65■■□□□ 1.86
HDAC7-227ENST00000548080 ATP10AO60312 1499 aa26.65■■□□□ 1.86
HDAC7-227ENST00000548080 KDM4FA0A1W2PPD8 638 aa26.62■■□□□ 1.85
HDAC7-227ENST00000548080 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
HDAC7-227ENST00000548080 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
HDAC7-227ENST00000548080 FAM50AQ14320 339 aaKnown RBP26.61■■□□□ 1.85
HDAC7-227ENST00000548080 MLECQ14165 292 aa26.56■■□□□ 1.84
HDAC7-227ENST00000548080 BCORL1Q5H9F3 1711 aa26.56■■□□□ 1.84
HDAC7-227ENST00000548080 CROCC2H7BZ55 1655 aa26.55■■□□□ 1.84
HDAC7-227ENST00000548080 RSPH4AQ5TD94 716 aa26.55■■□□□ 1.84
HDAC7-227ENST00000548080 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
HDAC7-227ENST00000548080 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
HDAC7-227ENST00000548080 ABCC5O15440 1437 aa26.54■■□□□ 1.84
HDAC7-227ENST00000548080 TSPY4P0CV99 314 aa26.54■■□□□ 1.84
HDAC7-227ENST00000548080 TSPY10P0CW01 314 aa26.54■■□□□ 1.84
HDAC7-227ENST00000548080 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
HDAC7-227ENST00000548080 DAPK1P53355 1430 aa26.53■■□□□ 1.84
HDAC7-227ENST00000548080 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
HDAC7-227ENST00000548080 REREQ9P2R6 1566 aa26.51■■□□□ 1.83
HDAC7-227ENST00000548080 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
HDAC7-227ENST00000548080 A2MP01023 1474 aa26.5■■□□□ 1.83
HDAC7-227ENST00000548080 CHIC2Q9UKJ5 165 aa26.49■■□□□ 1.83
HDAC7-227ENST00000548080 ADAMTSL3P82987 1691 aa26.49■■□□□ 1.83
HDAC7-227ENST00000548080 MADDQ8WXG6 1647 aa26.48■■□□□ 1.83
HDAC7-227ENST00000548080 PLXNC1O60486 1568 aa26.46■■□□□ 1.83
HDAC7-227ENST00000548080 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
HDAC7-227ENST00000548080 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
HDAC7-227ENST00000548080 ITGAEP38570 1179 aa26.43■■□□□ 1.82
HDAC7-227ENST00000548080 RIMS1Q86UR5 1692 aaKnown RBP26.43■■□□□ 1.82
HDAC7-227ENST00000548080 AGLP35573 1532 aa26.43■■□□□ 1.82
HDAC7-227ENST00000548080 FER1L4A9Z1Z3 1794 aa26.41■■□□□ 1.82
HDAC7-227ENST00000548080 DHX29Q7Z478 1369 aaKnown RBP26.4■■□□□ 1.82
HDAC7-227ENST00000548080 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
HDAC7-227ENST00000548080 RRBP1Q9P2E9 1410 aaKnown RBP26.4■■□□□ 1.82
HDAC7-227ENST00000548080 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.82
HDAC7-227ENST00000548080 PLPPR3Q6T4P5 718 aa26.37■■□□□ 1.81
HDAC7-227ENST00000548080 KIF15Q9NS87 1388 aa26.36■■□□□ 1.81
HDAC7-227ENST00000548080 GGT6Q6P531 493 aa26.35■■□□□ 1.81
HDAC7-227ENST00000548080 KIF3BO15066 747 aa26.34■■□□□ 1.81
HDAC7-227ENST00000548080 PTPRMP28827 1452 aa26.33■■□□□ 1.81
HDAC7-227ENST00000548080 ANKRD30AQ9BXX3 1397 aa26.32■■□□□ 1.8
HDAC7-227ENST00000548080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.31■■□□□ 1.8
HDAC7-227ENST00000548080 DUOX2Q9NRD8 1548 aa26.31■■□□□ 1.8
HDAC7-227ENST00000548080 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
HDAC7-227ENST00000548080 ADGRL2O95490 1459 aa26.3■■□□□ 1.8
HDAC7-227ENST00000548080 CLTCQ00610 1675 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms