RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 MAGI2Q86UL8 1455 aa30.54■■■□□ 2.48
GCN1-203ENST00000547369 POGZQ7Z3K3 1410 aa30.53■■■□□ 2.48
GCN1-203ENST00000547369 YEATS2Q9ULM3 1422 aa30.53■■■□□ 2.48
GCN1-203ENST00000547369 EFCAB2Q5VUJ9 269 aa30.52■■■□□ 2.48
GCN1-203ENST00000547369 CLIP1P30622 1438 aa30.5■■■□□ 2.47
GCN1-203ENST00000547369 ILDR1Q86SU0 546 aaPredicted RBP30.48■■■□□ 2.47
GCN1-203ENST00000547369 RIMS1Q86UR5 1692 aaKnown RBP30.47■■■□□ 2.47
GCN1-203ENST00000547369 SIGLEC1Q9BZZ2 1709 aa30.46■■■□□ 2.47
GCN1-203ENST00000547369 CASKIN1Q8WXD9 1431 aa30.45■■■□□ 2.46
GCN1-203ENST00000547369 PCF11O94913 1555 aaKnown RBP30.45■■■□□ 2.46
GCN1-203ENST00000547369 ARHGAP5Q13017 1502 aa30.43■■■□□ 2.46
GCN1-203ENST00000547369 CCDC18Q5T9S5 1454 aa30.42■■■□□ 2.46
GCN1-203ENST00000547369 ATP10AO60312 1499 aa30.38■■■□□ 2.45
GCN1-203ENST00000547369 ZNF518AQ6AHZ1 1483 aa30.37■■■□□ 2.45
GCN1-203ENST00000547369 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
GCN1-203ENST00000547369 MLECQ14165 292 aa30.35■■■□□ 2.45
GCN1-203ENST00000547369 C9orf84Q5VXU9 1444 aa30.34■■■□□ 2.45
GCN1-203ENST00000547369 LMTK3Q96Q04 1460 aa30.33■■■□□ 2.45
GCN1-203ENST00000547369 KDM5CP41229 1560 aa30.32■■■□□ 2.45
GCN1-203ENST00000547369 FYCO1Q9BQS8 1478 aa30.32■■■□□ 2.44
GCN1-203ENST00000547369 AFAP1Q8N556 730 aa30.32■■■□□ 2.44
GCN1-203ENST00000547369 FER1L4A9Z1Z3 1794 aa30.31■■■□□ 2.44
GCN1-203ENST00000547369 PREX2Q70Z35 1606 aa30.31■■■□□ 2.44
GCN1-203ENST00000547369 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
GCN1-203ENST00000547369 ARHGEF12Q9NZN5 1544 aa30.26■■■□□ 2.43
GCN1-203ENST00000547369 MYT1LQ9UL68 1186 aa30.25■■■□□ 2.43
GCN1-203ENST00000547369 ABCC1P33527 1531 aa30.23■■■□□ 2.43
GCN1-203ENST00000547369 CDC42BPAQ5VT25 1732 aa30.23■■■□□ 2.43
GCN1-203ENST00000547369 DIP2CQ9Y2E4 1556 aa30.21■■■□□ 2.43
GCN1-203ENST00000547369 MLH3Q9UHC1 1453 aa30.21■■■□□ 2.43
GCN1-203ENST00000547369 TRAPPC8Q9Y2L5 1435 aa30.2■■■□□ 2.42
GCN1-203ENST00000547369 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
GCN1-203ENST00000547369 REREQ9P2R6 1566 aa30.17■■■□□ 2.42
GCN1-203ENST00000547369 HSPA2P54652 639 aa30.17■■■□□ 2.42
GCN1-203ENST00000547369 ABCA6Q8N139 1617 aa30.17■■■□□ 2.42
GCN1-203ENST00000547369 GPATCH8Q9UKJ3 1502 aaKnown RBP30.12■■■□□ 2.41
GCN1-203ENST00000547369 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
GCN1-203ENST00000547369 CEBPAP49715 358 aaPredicted RBP30.09■■■□□ 2.41
GCN1-203ENST00000547369 SAMD9LQ8IVG5 1584 aa30.09■■■□□ 2.41
GCN1-203ENST00000547369 KIDINS220Q9ULH0 1771 aa30.09■■■□□ 2.41
GCN1-203ENST00000547369 AGLP35573 1532 aa30.08■■■□□ 2.41
GCN1-203ENST00000547369 PREX1Q8TCU6 1659 aa30.05■■■□□ 2.4
GCN1-203ENST00000547369 FBXO41Q8TF61 875 aa30.05■■■□□ 2.4
GCN1-203ENST00000547369 SYCP2Q9BX26 1530 aa30.04■■■□□ 2.4
GCN1-203ENST00000547369 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
GCN1-203ENST00000547369 CCNB3Q8WWL7 1395 aa30.02■■■□□ 2.4
GCN1-203ENST00000547369 CFDP1Q9UEE9 299 aaPredicted RBP30.01■■■□□ 2.39
GCN1-203ENST00000547369 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
GCN1-203ENST00000547369 SETD1BQ9UPS6 1966 aaKnown RBP30■■■□□ 2.39
GCN1-203ENST00000547369 KIAA1107Q9UPP5 1409 aa29.98■■■□□ 2.39
GCN1-203ENST00000547369 PLEKHH2Q8IVE3 1493 aa29.98■■■□□ 2.39
GCN1-203ENST00000547369 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
GCN1-203ENST00000547369 CEP162Q5TB80 1403 aa29.97■■■□□ 2.39
GCN1-203ENST00000547369 ESF1Q9H501 851 aaKnown RBP29.97■■■□□ 2.39
GCN1-203ENST00000547369 C3P01024 1663 aa29.96■■■□□ 2.39
GCN1-203ENST00000547369 UHRF1BP1Q6BDS2 1440 aa29.94■■■□□ 2.38
GCN1-203ENST00000547369 EHBP1L1Q8N3D4 1523 aa29.93■■■□□ 2.38
GCN1-203ENST00000547369 ATP7AQ04656 1500 aa29.92■■■□□ 2.38
GCN1-203ENST00000547369 CNTLNQ9NXG0 1405 aa29.9■■■□□ 2.38
GCN1-203ENST00000547369 TIAM1Q13009 1591 aa29.9■■■□□ 2.38
GCN1-203ENST00000547369 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
GCN1-203ENST00000547369 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
GCN1-203ENST00000547369 ZNF644Q9H582 1327 aaPredicted RBP29.84■■■□□ 2.37
GCN1-203ENST00000547369 STRCQ7RTU9 1775 aa29.84■■■□□ 2.37
GCN1-203ENST00000547369 PLXNC1O60486 1568 aa29.83■■■□□ 2.37
GCN1-203ENST00000547369 A2MP01023 1474 aa29.83■■■□□ 2.37
GCN1-203ENST00000547369 MROH2AA6NES4 1674 aa29.82■■■□□ 2.36
GCN1-203ENST00000547369 DMRT2Q9Y5R5 561 aa29.8■■■□□ 2.36
GCN1-203ENST00000547369 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
GCN1-203ENST00000547369 CERKQ8TCT0 537 aa29.79■■■□□ 2.36
GCN1-203ENST00000547369 ZMYM3Q14202 1370 aa29.77■■■□□ 2.36
GCN1-203ENST00000547369 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.36
GCN1-203ENST00000547369 NPATQ14207 1427 aa29.75■■■□□ 2.35
GCN1-203ENST00000547369 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
GCN1-203ENST00000547369 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
GCN1-203ENST00000547369 RTEL1-TNFRSF6BF6WH68 1400 aa29.72■■■□□ 2.35
GCN1-203ENST00000547369 GGT6Q6P531 493 aa29.72■■■□□ 2.35
GCN1-203ENST00000547369 LOC105371045A0A1W2PR82 267 aa29.71■■■□□ 2.35
GCN1-203ENST00000547369 PTPRTO14522 1441 aa29.68■■■□□ 2.34
GCN1-203ENST00000547369 CAMSAP2Q08AD1 1489 aa29.68■■■□□ 2.34
GCN1-203ENST00000547369 PPP6R1Q9UPN7 881 aa29.67■■■□□ 2.34
GCN1-203ENST00000547369 VPS8Q8N3P4 1428 aa29.67■■■□□ 2.34
GCN1-203ENST00000547369 CCDC141Q6ZP82 1450 aa29.66■■■□□ 2.34
GCN1-203ENST00000547369 DHX29Q7Z478 1369 aaKnown RBP29.64■■■□□ 2.34
GCN1-203ENST00000547369 NCOA1Q15788 1441 aa29.64■■■□□ 2.34
GCN1-203ENST00000547369 RSPH4AQ5TD94 716 aa29.63■■■□□ 2.33
GCN1-203ENST00000547369 PTPRKQ15262 1439 aa29.62■■■□□ 2.33
GCN1-203ENST00000547369 LRRC9Q6ZRR7 1453 aa29.61■■■□□ 2.33
GCN1-203ENST00000547369 CAMSAP1Q5T5Y3 1602 aa29.6■■■□□ 2.33
GCN1-203ENST00000547369 MYO3AQ8NEV4 1616 aa29.59■■■□□ 2.33
GCN1-203ENST00000547369 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
GCN1-203ENST00000547369 ARHGEF5Q12774 1597 aa29.56■■■□□ 2.32
GCN1-203ENST00000547369 KIF3BO15066 747 aa29.55■■■□□ 2.32
GCN1-203ENST00000547369 CEP170BQ9Y4F5 1589 aaPredicted RBP29.53■■■□□ 2.32
GCN1-203ENST00000547369 MAP3K1Q13233 1512 aa29.53■■■□□ 2.32
GCN1-203ENST00000547369 TSPY4P0CV99 314 aa29.52■■■□□ 2.32
GCN1-203ENST00000547369 TSPY10P0CW01 314 aa29.52■■■□□ 2.32
GCN1-203ENST00000547369 KANK4Q5T7N3 995 aaPredicted RBP29.5■■■□□ 2.31
GCN1-203ENST00000547369 LTBP4Q8N2S1 1624 aa29.49■■■□□ 2.31
GCN1-203ENST00000547369 NCKAP5LQ9HCH0 1330 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 318.8 ms