RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
USP25-209ENST00000547201 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
USP25-209ENST00000547201 NLRP6P59044 892 aa10.8□□□□□ -0.68
USP25-209ENST00000547201 PKD2Q13563 968 aa10.8□□□□□ -0.68
USP25-209ENST00000547201 STK25O00506 426 aa10.79□□□□□ -0.68
USP25-209ENST00000547201 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
USP25-209ENST00000547201 ZNF710Q8N1W2 664 aa10.77□□□□□ -0.69
USP25-209ENST00000547201 RGL2O15211 777 aa10.76□□□□□ -0.69
USP25-209ENST00000547201 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
USP25-209ENST00000547201 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
USP25-209ENST00000547201 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
USP25-209ENST00000547201 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
USP25-209ENST00000547201 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
USP25-209ENST00000547201 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
USP25-209ENST00000547201 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
USP25-209ENST00000547201 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
USP25-209ENST00000547201 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
USP25-209ENST00000547201 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
USP25-209ENST00000547201 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
USP25-209ENST00000547201 CECR2Q9BXF3 1484 aa10.66□□□□□ -0.7
USP25-209ENST00000547201 ERBB3P21860 1342 aa10.64□□□□□ -0.71
USP25-209ENST00000547201 MMRN1Q13201 1228 aa10.64□□□□□ -0.71
USP25-209ENST00000547201 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
USP25-209ENST00000547201 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
USP25-209ENST00000547201 EIF4G1Q04637 1599 aaKnown RBP10.64□□□□□ -0.71
USP25-209ENST00000547201 GPR153Q6NV75 609 aa10.61□□□□□ -0.71
USP25-209ENST00000547201 CC2D2AQ9P2K1 1620 aa10.59□□□□□ -0.71
USP25-209ENST00000547201 KIF3CO14782 793 aa10.58□□□□□ -0.72
USP25-209ENST00000547201 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
USP25-209ENST00000547201 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
USP25-209ENST00000547201 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
USP25-209ENST00000547201 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
USP25-209ENST00000547201 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
USP25-209ENST00000547201 MROH2BQ7Z745 1585 aa10.54□□□□□ -0.72
USP25-209ENST00000547201 PPP1R37O75864 691 aa10.53□□□□□ -0.72
USP25-209ENST00000547201 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
USP25-209ENST00000547201 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
USP25-209ENST00000547201 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
USP25-209ENST00000547201 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■□□□ 12.8
USP25-209ENST00000547201 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
USP25-209ENST00000547201 SLC34A2O95436 690 aa10.46□□□□□ -0.73
USP25-209ENST00000547201 WIZO95785 1651 aa10.46□□□□□ -0.74
USP25-209ENST00000547201 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
USP25-209ENST00000547201 NUDT7P0C024 238 aa10.44□□□□□ -0.74
USP25-209ENST00000547201 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
USP25-209ENST00000547201 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
USP25-209ENST00000547201 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
USP25-209ENST00000547201 RYDENQ9NUL5 291 aaKnown RBP10.4□□□□□ -0.74
USP25-209ENST00000547201 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
USP25-209ENST00000547201 FOXK1P85037 733 aa10.38□□□□□ -0.75
USP25-209ENST00000547201 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
USP25-209ENST00000547201 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
USP25-209ENST00000547201 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
USP25-209ENST00000547201 PEG3Q9GZU2 1588 aa10.38□□□□□ -0.75
USP25-209ENST00000547201 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
USP25-209ENST00000547201 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
USP25-209ENST00000547201 PBX2P40425 430 aa10.35□□□□□ -0.75
USP25-209ENST00000547201 PTGER2P43116 358 aa10.35□□□□□ -0.75
USP25-209ENST00000547201 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
USP25-209ENST00000547201 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP25-209ENST00000547201 DSG2Q14126 1118 aa10.34□□□□□ -0.75
USP25-209ENST00000547201 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
USP25-209ENST00000547201 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
USP25-209ENST00000547201 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
USP25-209ENST00000547201 SMARCA2P51531 1590 aa10.32□□□□□ -0.76
USP25-209ENST00000547201 NCAPD3P42695 1498 aa10.31□□□□□ -0.76
USP25-209ENST00000547201 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
USP25-209ENST00000547201 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
USP25-209ENST00000547201 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
USP25-209ENST00000547201 TBC1D12O60347 775 aa10.28□□□□□ -0.76
USP25-209ENST00000547201 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
USP25-209ENST00000547201 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
USP25-209ENST00000547201 AXIN2Q9Y2T1 843 aa10.27□□□□□ -0.77
USP25-209ENST00000547201 TOP2AP11388 1531 aaKnown RBP10.26□□□□□ -0.77
USP25-209ENST00000547201 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
USP25-209ENST00000547201 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
USP25-209ENST00000547201 NESP48681 1621 aa10.23□□□□□ -0.77
USP25-209ENST00000547201 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
USP25-209ENST00000547201 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
USP25-209ENST00000547201 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
USP25-209ENST00000547201 PDE4AP27815 886 aa10.21□□□□□ -0.77
USP25-209ENST00000547201 UPF1Q92900 1129 aaKnown RBP eCLIP10.21□□□□□ -0.77
USP25-209ENST00000547201 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
USP25-209ENST00000547201 ADGRD1Q6QNK2 874 aa10.19□□□□□ -0.78
USP25-209ENST00000547201 PSEN2P49810 448 aa10.17□□□□□ -0.78
USP25-209ENST00000547201 TK2O00142 265 aa10.15□□□□□ -0.78
USP25-209ENST00000547201 DMRTA1Q5VZB9 504 aa10.15□□□□□ -0.78
USP25-209ENST00000547201 KCNH8Q96L42 1107 aa10.15□□□□□ -0.78
USP25-209ENST00000547201 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
USP25-209ENST00000547201 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
USP25-209ENST00000547201 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
USP25-209ENST00000547201 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
USP25-209ENST00000547201 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
USP25-209ENST00000547201 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
USP25-209ENST00000547201 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
USP25-209ENST00000547201 MFSD10Q14728 455 aa10.11□□□□□ -0.79
USP25-209ENST00000547201 HRO43593 1189 aa10.1□□□□□ -0.79
USP25-209ENST00000547201 EVI5O60447 810 aa10.08□□□□□ -0.8
USP25-209ENST00000547201 FOSBP53539 338 aa10.08□□□□□ -0.8
USP25-209ENST00000547201 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms