RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
ERGIC2-202ENST00000546509 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
ERGIC2-202ENST00000546509 RIMBP2O15034 1052 aa17.28■□□□□ 0.36
ERGIC2-202ENST00000546509 MARVELD3Q96A59 401 aa17.27■□□□□ 0.36
ERGIC2-202ENST00000546509 KIF3CO14782 793 aa17.24■□□□□ 0.35
ERGIC2-202ENST00000546509 EMP3P54852 163 aa17.24■□□□□ 0.35
ERGIC2-202ENST00000546509 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
ERGIC2-202ENST00000546509 C2orf72A6NCS6 295 aa17.23■□□□□ 0.35
ERGIC2-202ENST00000546509 RTN4Q9NQC3 1192 aaKnown RBP17.22■□□□□ 0.35
ERGIC2-202ENST00000546509 HOXB1P14653 301 aaPredicted RBP17.19■□□□□ 0.34
ERGIC2-202ENST00000546509 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
ERGIC2-202ENST00000546509 CDAN1Q8IWY9 1227 aa17.18■□□□□ 0.34
ERGIC2-202ENST00000546509 GTPBP6O43824 516 aaPredicted RBP17.15■□□□□ 0.34
ERGIC2-202ENST00000546509 FAM205CA6NFA0 338 aa17.1■□□□□ 0.33
ERGIC2-202ENST00000546509 GPR153Q6NV75 609 aa17.08■□□□□ 0.32
ERGIC2-202ENST00000546509 HS3ST6Q96QI5 342 aa17.07■□□□□ 0.32
ERGIC2-202ENST00000546509 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
ERGIC2-202ENST00000546509 PLSCR2Q9NRY7 297 aa17.07■□□□□ 0.32
ERGIC2-202ENST00000546509 ARSIQ5FYB1 569 aa17.04■□□□□ 0.32
ERGIC2-202ENST00000546509 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
ERGIC2-202ENST00000546509 ERBB3P21860 1342 aa17.03■□□□□ 0.32
ERGIC2-202ENST00000546509 SLC34A2O95436 690 aa17.03■□□□□ 0.32
ERGIC2-202ENST00000546509 FOXK1P85037 733 aa17.03■□□□□ 0.32
ERGIC2-202ENST00000546509 POTEB3A0JP26 581 aa17■□□□□ 0.31
ERGIC2-202ENST00000546509 POTEBQ6S5H4 581 aa17■□□□□ 0.31
ERGIC2-202ENST00000546509 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
ERGIC2-202ENST00000546509 DSG2Q14126 1118 aa16.96■□□□□ 0.31
ERGIC2-202ENST00000546509 KHSRPQ92945 711 aaKnown RBP eCLIP16.95■□□□□ 0.3
ERGIC2-202ENST00000546509 CRISPLD2Q9H0B8 497 aa16.95■□□□□ 0.3
ERGIC2-202ENST00000546509 PDE4AP27815 886 aa16.94■□□□□ 0.3
ERGIC2-202ENST00000546509 VARS2Q5ST30 1063 aaKnown RBP16.94■□□□□ 0.3
ERGIC2-202ENST00000546509 PCDHGA4Q9Y5G9 962 aa16.94■□□□□ 0.3
ERGIC2-202ENST00000546509 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
ERGIC2-202ENST00000546509 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
ERGIC2-202ENST00000546509 NUDT7P0C024 238 aa16.88■□□□□ 0.29
ERGIC2-202ENST00000546509 PTCD2Q8WV60 388 aaKnown RBP16.88■□□□□ 0.29
ERGIC2-202ENST00000546509 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
ERGIC2-202ENST00000546509 PPP1R15BQ5SWA1 713 aa16.86■□□□□ 0.29
ERGIC2-202ENST00000546509 TBC1D12O60347 775 aa16.84■□□□□ 0.29
ERGIC2-202ENST00000546509 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
ERGIC2-202ENST00000546509 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
ERGIC2-202ENST00000546509 KRTAP3-3Q9BYR6 98 aa16.83■□□□□ 0.28
ERGIC2-202ENST00000546509 KRTAP3-2Q9BYR7 98 aa16.83■□□□□ 0.28
ERGIC2-202ENST00000546509 ZNF687Q8N1G0 1237 aa16.82■□□□□ 0.28
ERGIC2-202ENST00000546509 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
ERGIC2-202ENST00000546509 LHX6Q9UPM6 363 aa16.78■□□□□ 0.28
ERGIC2-202ENST00000546509 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
ERGIC2-202ENST00000546509 MFSD10Q14728 455 aa16.75■□□□□ 0.27
ERGIC2-202ENST00000546509 SPNS2Q8IVW8 549 aa16.75■□□□□ 0.27
ERGIC2-202ENST00000546509 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
ERGIC2-202ENST00000546509 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
ERGIC2-202ENST00000546509 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
ERGIC2-202ENST00000546509 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
ERGIC2-202ENST00000546509 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
ERGIC2-202ENST00000546509 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
ERGIC2-202ENST00000546509 PBX2P40425 430 aa16.63■□□□□ 0.25
ERGIC2-202ENST00000546509 MMRN1Q13201 1228 aa16.63■□□□□ 0.25
ERGIC2-202ENST00000546509 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
ERGIC2-202ENST00000546509 PPP4R3BQ5MIZ7 849 aa16.59■□□□□ 0.25
ERGIC2-202ENST00000546509 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
ERGIC2-202ENST00000546509 EVI5O60447 810 aa16.55■□□□□ 0.24
ERGIC2-202ENST00000546509 LSM11P83369 360 aaKnown RBP eCLIP16.55■□□□□ 0.24
ERGIC2-202ENST00000546509 ANKRD13DQ6ZTN6 518 aa16.54■□□□□ 0.24
ERGIC2-202ENST00000546509 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
ERGIC2-202ENST00000546509 AXIN2Q9Y2T1 843 aa16.53■□□□□ 0.24
ERGIC2-202ENST00000546509 ARHGAP33O14559 1287 aa16.52■□□□□ 0.24
ERGIC2-202ENST00000546509 CAMK2BQ13554 666 aa16.52■□□□□ 0.24
ERGIC2-202ENST00000546509 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.24
ERGIC2-202ENST00000546509 ZNF454Q8N9F8 522 aa16.49■□□□□ 0.23
ERGIC2-202ENST00000546509 PTGER2P43116 358 aa16.47■□□□□ 0.23
ERGIC2-202ENST00000546509 FOSBP53539 338 aa16.45■□□□□ 0.22
ERGIC2-202ENST00000546509 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
ERGIC2-202ENST00000546509 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
ERGIC2-202ENST00000546509 WDR70Q9NW82 654 aa16.44■□□□□ 0.22
ERGIC2-202ENST00000546509 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
ERGIC2-202ENST00000546509 PSEN2P49810 448 aa16.41■□□□□ 0.22
ERGIC2-202ENST00000546509 DPYSL4O14531 572 aa16.4■□□□□ 0.22
ERGIC2-202ENST00000546509 KCNK17Q96T54 332 aa16.39■□□□□ 0.21
ERGIC2-202ENST00000546509 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
ERGIC2-202ENST00000546509 E2F4Q16254 413 aa16.37■□□□□ 0.21
ERGIC2-202ENST00000546509 ZDHHC16Q969W1 377 aa16.37■□□□□ 0.21
ERGIC2-202ENST00000546509 RNF166Q96A37 237 aaPredicted RBP16.37■□□□□ 0.21
ERGIC2-202ENST00000546509 DMRTA1Q5VZB9 504 aa16.36■□□□□ 0.21
ERGIC2-202ENST00000546509 ADGRD1Q6QNK2 874 aa16.36■□□□□ 0.21
ERGIC2-202ENST00000546509 TK2O00142 265 aa16.35■□□□□ 0.21
ERGIC2-202ENST00000546509 PTPREP23469 700 aa16.33■□□□□ 0.2
ERGIC2-202ENST00000546509 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
ERGIC2-202ENST00000546509 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
ERGIC2-202ENST00000546509 PHF14O94880 888 aa16.3■□□□□ 0.2
ERGIC2-202ENST00000546509 ADAM33Q9BZ11 813 aa16.29■□□□□ 0.2
ERGIC2-202ENST00000546509 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
ERGIC2-202ENST00000546509 FBXW7Q969H0 707 aa16.28■□□□□ 0.2
ERGIC2-202ENST00000546509 SPDYE16A6NNV3 312 aaPredicted RBP16.26■□□□□ 0.19
ERGIC2-202ENST00000546509 ARIH1Q9Y4X5 557 aaPredicted RBP16.26■□□□□ 0.19
ERGIC2-202ENST00000546509 PDIA6Q15084 440 aa16.25■□□□□ 0.19
ERGIC2-202ENST00000546509 EPAS1Q99814 870 aa16.24■□□□□ 0.19
ERGIC2-202ENST00000546509 HRO43593 1189 aa16.23■□□□□ 0.19
ERGIC2-202ENST00000546509 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
ERGIC2-202ENST00000546509 SLC4A5Q9BY07 1137 aa16.23■□□□□ 0.19
ERGIC2-202ENST00000546509 VPS9D1Q9Y2B5 631 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms