RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
CPSF7-225ENST00000545934 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
CPSF7-225ENST00000545934 KIF14Q15058 1648 aa27.86■■■□□ 2.05
CPSF7-225ENST00000545934 SCAPERQ9BY12 1400 aa27.85■■■□□ 2.05
CPSF7-225ENST00000545934 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
CPSF7-225ENST00000545934 ATP10AO60312 1499 aa27.78■■■□□ 2.04
CPSF7-225ENST00000545934 KDM5CP41229 1560 aa27.77■■■□□ 2.04
CPSF7-225ENST00000545934 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
CPSF7-225ENST00000545934 PREX1Q8TCU6 1659 aa27.75■■■□□ 2.03
CPSF7-225ENST00000545934 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
CPSF7-225ENST00000545934 TROQ12816 1431 aaPredicted RBP27.74■■■□□ 2.03
CPSF7-225ENST00000545934 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
CPSF7-225ENST00000545934 EFCAB2Q5VUJ9 269 aa27.73■■■□□ 2.03
CPSF7-225ENST00000545934 ZNF518AQ6AHZ1 1483 aa27.71■■■□□ 2.03
CPSF7-225ENST00000545934 HSPA2P54652 639 aa27.71■■■□□ 2.03
CPSF7-225ENST00000545934 CDK11AQ9UQ88 783 aaPredicted RBP27.7■■■□□ 2.02
CPSF7-225ENST00000545934 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
CPSF7-225ENST00000545934 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
CPSF7-225ENST00000545934 MLECQ14165 292 aa27.68■■■□□ 2.02
CPSF7-225ENST00000545934 DIP2CQ9Y2E4 1556 aa27.68■■■□□ 2.02
CPSF7-225ENST00000545934 PREX2Q70Z35 1606 aa27.67■■■□□ 2.02
CPSF7-225ENST00000545934 ATP1B4Q9UN42 357 aaPredicted RBP27.67■■■□□ 2.02
CPSF7-225ENST00000545934 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
CPSF7-225ENST00000545934 EHMT2Q96KQ7 1210 aa27.65■■■□□ 2.02
CPSF7-225ENST00000545934 CLIP1P30622 1438 aa27.65■■■□□ 2.02
CPSF7-225ENST00000545934 ABCA6Q8N139 1617 aa27.64■■■□□ 2.02
CPSF7-225ENST00000545934 ITSN2Q9NZM3 1697 aa27.63■■■□□ 2.01
CPSF7-225ENST00000545934 STRCQ7RTU9 1775 aa27.62■■■□□ 2.01
CPSF7-225ENST00000545934 SETD1BQ9UPS6 1966 aaKnown RBP27.62■■■□□ 2.01
CPSF7-225ENST00000545934 CDC42BPAQ5VT25 1732 aa27.61■■■□□ 2.01
CPSF7-225ENST00000545934 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
CPSF7-225ENST00000545934 ABCC1P33527 1531 aa27.6■■■□□ 2.01
CPSF7-225ENST00000545934 MLH3Q9UHC1 1453 aa27.59■■■□□ 2.01
CPSF7-225ENST00000545934 AFAP1Q8N556 730 aa27.59■■■□□ 2.01
CPSF7-225ENST00000545934 C3P01024 1663 aa27.58■■■□□ 2.01
CPSF7-225ENST00000545934 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
CPSF7-225ENST00000545934 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
CPSF7-225ENST00000545934 KIDINS220Q9ULH0 1771 aa27.55■■■□□ 2
CPSF7-225ENST00000545934 AGLP35573 1532 aa27.54■■■□□ 2
CPSF7-225ENST00000545934 CEBPAP49715 358 aaPredicted RBP27.52■■■□□ 2
CPSF7-225ENST00000545934 TRAPPC8Q9Y2L5 1435 aa27.5■■□□□ 1.99
CPSF7-225ENST00000545934 CERKQ8TCT0 537 aa27.5■■□□□ 1.99
CPSF7-225ENST00000545934 FYCO1Q9BQS8 1478 aa27.45■■□□□ 1.99
CPSF7-225ENST00000545934 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.98
CPSF7-225ENST00000545934 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
CPSF7-225ENST00000545934 MROH2AA6NES4 1674 aa27.42■■□□□ 1.98
CPSF7-225ENST00000545934 MYT1LQ9UL68 1186 aa27.4■■□□□ 1.98
CPSF7-225ENST00000545934 DMRT2Q9Y5R5 561 aa27.36■■□□□ 1.97
CPSF7-225ENST00000545934 SYCP2Q9BX26 1530 aa27.35■■□□□ 1.97
CPSF7-225ENST00000545934 GPATCH8Q9UKJ3 1502 aaKnown RBP27.35■■□□□ 1.97
CPSF7-225ENST00000545934 CNTLNQ9NXG0 1405 aa27.34■■□□□ 1.97
CPSF7-225ENST00000545934 SUPT6HQ7KZ85 1726 aaKnown RBP27.34■■□□□ 1.97
CPSF7-225ENST00000545934 PTPRTO14522 1441 aa27.33■■□□□ 1.97
CPSF7-225ENST00000545934 INO80Q9ULG1 1556 aaPredicted RBP27.32■■□□□ 1.96
CPSF7-225ENST00000545934 PLXNC1O60486 1568 aa27.31■■□□□ 1.96
CPSF7-225ENST00000545934 ATP7AQ04656 1500 aa27.28■■□□□ 1.96
CPSF7-225ENST00000545934 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
CPSF7-225ENST00000545934 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
CPSF7-225ENST00000545934 NPATQ14207 1427 aa27.25■■□□□ 1.95
CPSF7-225ENST00000545934 NCOA1Q15788 1441 aa27.25■■□□□ 1.95
CPSF7-225ENST00000545934 KIAA1107Q9UPP5 1409 aa27.25■■□□□ 1.95
CPSF7-225ENST00000545934 ESF1Q9H501 851 aaKnown RBP27.25■■□□□ 1.95
CPSF7-225ENST00000545934 ZNF142P52746 1687 aaPredicted RBP27.24■■□□□ 1.95
CPSF7-225ENST00000545934 PLEKHH2Q8IVE3 1493 aa27.23■■□□□ 1.95
CPSF7-225ENST00000545934 ADGBQ8N7X0 1667 aa27.23■■□□□ 1.95
CPSF7-225ENST00000545934 SPAG9O60271 1321 aaKnown RBP27.21■■□□□ 1.95
CPSF7-225ENST00000545934 ZNF777Q9ULD5 760 aaPredicted RBP27.21■■□□□ 1.95
CPSF7-225ENST00000545934 CAMSAP1Q5T5Y3 1602 aa27.2■■□□□ 1.95
CPSF7-225ENST00000545934 HNRNPMP52272 730 aaKnown RBP eCLIP27.2■■□□□ 1.94
CPSF7-225ENST00000545934 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
CPSF7-225ENST00000545934 ZMYM3Q14202 1370 aa27.18■■□□□ 1.94
CPSF7-225ENST00000545934 A2MP01023 1474 aa27.18■■□□□ 1.94
CPSF7-225ENST00000545934 IQSEC2Q5JU85 1478 aa27.18■■□□□ 1.94
CPSF7-225ENST00000545934 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
CPSF7-225ENST00000545934 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.94
CPSF7-225ENST00000545934 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.94
CPSF7-225ENST00000545934 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
CPSF7-225ENST00000545934 CEP170BQ9Y4F5 1589 aaPredicted RBP27.11■■□□□ 1.93
CPSF7-225ENST00000545934 PTPRKQ15262 1439 aa27.1■■□□□ 1.93
CPSF7-225ENST00000545934 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
CPSF7-225ENST00000545934 MBD5Q9P267 1494 aa27.09■■□□□ 1.93
CPSF7-225ENST00000545934 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
CPSF7-225ENST00000545934 TCOF1Q13428 1488 aaKnown RBP27.05■■□□□ 1.92
CPSF7-225ENST00000545934 RTEL1-TNFRSF6BF6WH68 1400 aa27.03■■□□□ 1.92
CPSF7-225ENST00000545934 CEP162Q5TB80 1403 aa27.03■■□□□ 1.92
CPSF7-225ENST00000545934 ZNF644Q9H582 1327 aaPredicted RBP27.02■■□□□ 1.92
CPSF7-225ENST00000545934 PPP6R1Q9UPN7 881 aa27.02■■□□□ 1.92
CPSF7-225ENST00000545934 SPATA31D1Q6ZQQ2 1576 aa27.01■■□□□ 1.91
CPSF7-225ENST00000545934 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
CPSF7-225ENST00000545934 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
CPSF7-225ENST00000545934 DNMT1P26358 1616 aaKnown RBP27■■□□□ 1.91
CPSF7-225ENST00000545934 GGT6Q6P531 493 aa26.99■■□□□ 1.91
CPSF7-225ENST00000545934 POLR1AO95602 1720 aaPredicted RBP26.99■■□□□ 1.91
CPSF7-225ENST00000545934 PKD2Q13563 968 aa26.96■■□□□ 1.91
CPSF7-225ENST00000545934 ILDR2Q71H61 639 aa26.96■■□□□ 1.91
CPSF7-225ENST00000545934 FAM135AQ9P2D6 1515 aa26.95■■□□□ 1.91
CPSF7-225ENST00000545934 A2ML1A8K2U0 1454 aa26.95■■□□□ 1.91
CPSF7-225ENST00000545934 DHX29Q7Z478 1369 aaKnown RBP26.95■■□□□ 1.9
CPSF7-225ENST00000545934 ZNF335Q9H4Z2 1342 aaPredicted RBP26.93■■□□□ 1.9
CPSF7-225ENST00000545934 CCDC141Q6ZP82 1450 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms