RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
RTN3-214ENST00000545432 MLECQ14165 292 aa24.82■■□□□ 1.56
RTN3-214ENST00000545432 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
RTN3-214ENST00000545432 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
RTN3-214ENST00000545432 C9orf84Q5VXU9 1444 aa24.79■■□□□ 1.56
RTN3-214ENST00000545432 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
RTN3-214ENST00000545432 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
RTN3-214ENST00000545432 DMRT2Q9Y5R5 561 aa24.75■■□□□ 1.55
RTN3-214ENST00000545432 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
RTN3-214ENST00000545432 PREX1Q8TCU6 1659 aa24.7■■□□□ 1.54
RTN3-214ENST00000545432 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
RTN3-214ENST00000545432 ZNF518AQ6AHZ1 1483 aa24.7■■□□□ 1.54
RTN3-214ENST00000545432 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
RTN3-214ENST00000545432 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
RTN3-214ENST00000545432 KDM5CP41229 1560 aa24.68■■□□□ 1.54
RTN3-214ENST00000545432 AFAP1Q8N556 730 aa24.68■■□□□ 1.54
RTN3-214ENST00000545432 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
RTN3-214ENST00000545432 REREQ9P2R6 1566 aa24.65■■□□□ 1.54
RTN3-214ENST00000545432 PTPRTO14522 1441 aa24.64■■□□□ 1.54
RTN3-214ENST00000545432 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
RTN3-214ENST00000545432 UHRF1BP1Q6BDS2 1440 aa24.64■■□□□ 1.54
RTN3-214ENST00000545432 MYO5CQ9NQX4 1742 aa24.63■■□□□ 1.53
RTN3-214ENST00000545432 MLH3Q9UHC1 1453 aa24.63■■□□□ 1.53
RTN3-214ENST00000545432 ILDR2Q71H61 639 aa24.62■■□□□ 1.53
RTN3-214ENST00000545432 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
RTN3-214ENST00000545432 AGLP35573 1532 aa24.6■■□□□ 1.53
RTN3-214ENST00000545432 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
RTN3-214ENST00000545432 KIF14Q15058 1648 aa24.58■■□□□ 1.53
RTN3-214ENST00000545432 SOCS7O14512 581 aa24.58■■□□□ 1.53
RTN3-214ENST00000545432 DISP3Q9P2K9 1392 aa24.56■■□□□ 1.52
RTN3-214ENST00000545432 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
RTN3-214ENST00000545432 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
RTN3-214ENST00000545432 ARHGAP5Q13017 1502 aa24.55■■□□□ 1.52
RTN3-214ENST00000545432 CLIP1P30622 1438 aa24.53■■□□□ 1.52
RTN3-214ENST00000545432 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
RTN3-214ENST00000545432 LTBP4Q8N2S1 1624 aa24.52■■□□□ 1.52
RTN3-214ENST00000545432 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
RTN3-214ENST00000545432 ABCA6Q8N139 1617 aa24.49■■□□□ 1.51
RTN3-214ENST00000545432 C3P01024 1663 aa24.49■■□□□ 1.51
RTN3-214ENST00000545432 CNTLNQ9NXG0 1405 aa24.48■■□□□ 1.51
RTN3-214ENST00000545432 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
RTN3-214ENST00000545432 NCOA1Q15788 1441 aa24.47■■□□□ 1.51
RTN3-214ENST00000545432 ABCC1P33527 1531 aa24.45■■□□□ 1.51
RTN3-214ENST00000545432 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.5
RTN3-214ENST00000545432 ESF1Q9H501 851 aaKnown RBP24.43■■□□□ 1.5
RTN3-214ENST00000545432 NPATQ14207 1427 aa24.43■■□□□ 1.5
RTN3-214ENST00000545432 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
RTN3-214ENST00000545432 PREX2Q70Z35 1606 aa24.41■■□□□ 1.5
RTN3-214ENST00000545432 KIDINS220Q9ULH0 1771 aa24.4■■□□□ 1.5
RTN3-214ENST00000545432 CASKIN1Q8WXD9 1431 aa24.39■■□□□ 1.5
RTN3-214ENST00000545432 ZMYM3Q14202 1370 aa24.38■■□□□ 1.49
RTN3-214ENST00000545432 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
RTN3-214ENST00000545432 CCDC18Q5T9S5 1454 aa24.36■■□□□ 1.49
RTN3-214ENST00000545432 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.49
RTN3-214ENST00000545432 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
RTN3-214ENST00000545432 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.48
RTN3-214ENST00000545432 MROH2AA6NES4 1674 aa24.32■■□□□ 1.48
RTN3-214ENST00000545432 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
RTN3-214ENST00000545432 PKD2Q13563 968 aa24.29■■□□□ 1.48
RTN3-214ENST00000545432 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
RTN3-214ENST00000545432 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
RTN3-214ENST00000545432 GPATCH8Q9UKJ3 1502 aaKnown RBP24.28■■□□□ 1.48
RTN3-214ENST00000545432 SPAG9O60271 1321 aaKnown RBP24.28■■□□□ 1.48
RTN3-214ENST00000545432 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
RTN3-214ENST00000545432 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
RTN3-214ENST00000545432 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
RTN3-214ENST00000545432 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
RTN3-214ENST00000545432 TCOF1Q13428 1488 aaKnown RBP24.26■■□□□ 1.47
RTN3-214ENST00000545432 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
RTN3-214ENST00000545432 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
RTN3-214ENST00000545432 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
RTN3-214ENST00000545432 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
RTN3-214ENST00000545432 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
RTN3-214ENST00000545432 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
RTN3-214ENST00000545432 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
RTN3-214ENST00000545432 A2MP01023 1474 aa24.2■■□□□ 1.47
RTN3-214ENST00000545432 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
RTN3-214ENST00000545432 ZNF142P52746 1687 aaPredicted RBP24.19■■□□□ 1.46
RTN3-214ENST00000545432 UBAP1LF5GYI3 381 aa24.19■■□□□ 1.46
RTN3-214ENST00000545432 ATP7AQ04656 1500 aa24.18■■□□□ 1.46
RTN3-214ENST00000545432 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
RTN3-214ENST00000545432 INO80Q9ULG1 1556 aaPredicted RBP24.16■■□□□ 1.46
RTN3-214ENST00000545432 CEP170BQ9Y4F5 1589 aaPredicted RBP24.15■■□□□ 1.46
RTN3-214ENST00000545432 MYO3AQ8NEV4 1616 aa24.13■■□□□ 1.45
RTN3-214ENST00000545432 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
RTN3-214ENST00000545432 GGT6Q6P531 493 aa24.13■■□□□ 1.45
RTN3-214ENST00000545432 CLTCQ00610 1675 aaKnown RBP24.12■■□□□ 1.45
RTN3-214ENST00000545432 A2ML1A8K2U0 1454 aa24.1■■□□□ 1.45
RTN3-214ENST00000545432 CCNB3Q8WWL7 1395 aa24.09■■□□□ 1.45
RTN3-214ENST00000545432 RTEL1-TNFRSF6BF6WH68 1400 aa24.09■■□□□ 1.45
RTN3-214ENST00000545432 MBD5Q9P267 1494 aa24.08■■□□□ 1.45
RTN3-214ENST00000545432 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
RTN3-214ENST00000545432 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
RTN3-214ENST00000545432 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
RTN3-214ENST00000545432 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
RTN3-214ENST00000545432 CPS1P31327 1500 aa24■■□□□ 1.43
RTN3-214ENST00000545432 HSPA1LP34931 641 aa24■■□□□ 1.43
RTN3-214ENST00000545432 TOM1O60784 492 aa23.99■■□□□ 1.43
RTN3-214ENST00000545432 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
RTN3-214ENST00000545432 FBXO31Q5XUX0 539 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms