RNA–Protein interactions for RNA: ENST00000545174.5

NEK6-214, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 2,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-214ENST00000545174 CDK11AQ9UQ88 783 aaPredicted RBP31.24■■■□□ 2.59
NEK6-214ENST00000545174 ABCC5O15440 1437 aa31.24■■■□□ 2.59
NEK6-214ENST00000545174 AKNAQ7Z591 1439 aa31.23■■■□□ 2.59
NEK6-214ENST00000545174 ZNF777Q9ULD5 760 aaPredicted RBP31.16■■■□□ 2.58
NEK6-214ENST00000545174 CFDP1Q9UEE9 299 aaPredicted RBP31.14■■■□□ 2.58
NEK6-214ENST00000545174 TROQ12816 1431 aaPredicted RBP31.14■■■□□ 2.57
NEK6-214ENST00000545174 L3MBTL2Q969R5 705 aa31.13■■■□□ 2.57
NEK6-214ENST00000545174 NUP160Q12769 1436 aa31.11■■■□□ 2.57
NEK6-214ENST00000545174 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
NEK6-214ENST00000545174 ROCK1Q13464 1354 aa31.11■■■□□ 2.57
NEK6-214ENST00000545174 ANP32CO43423 234 aa31.11■■■□□ 2.57
NEK6-214ENST00000545174 SUPT16HQ9Y5B9 1047 aaKnown RBP31.1■■■□□ 2.57
NEK6-214ENST00000545174 HSPA5P11021 654 aaKnown RBP31.08■■■□□ 2.57
NEK6-214ENST00000545174 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.56
NEK6-214ENST00000545174 KIF14Q15058 1648 aa31.07■■■□□ 2.56
NEK6-214ENST00000545174 GPATCH8Q9UKJ3 1502 aaKnown RBP31.06■■■□□ 2.56
NEK6-214ENST00000545174 SLC4A1APQ9BWU0 796 aaKnown RBP31.06■■■□□ 2.56
NEK6-214ENST00000545174 CAMSAP2Q08AD1 1489 aa31.03■■■□□ 2.56
NEK6-214ENST00000545174 ANKRD30BQ9BXX2 1392 aa31.03■■■□□ 2.56
NEK6-214ENST00000545174 WASHC2AQ641Q2 1341 aa31■■■□□ 2.55
NEK6-214ENST00000545174 CCER2I3L3R5 266 aa30.99■■■□□ 2.55
NEK6-214ENST00000545174 NBPF8Q3BBV2 869 aa30.98■■■□□ 2.55
NEK6-214ENST00000545174 NCOA1Q15788 1441 aa30.96■■■□□ 2.55
NEK6-214ENST00000545174 PLEKHD1A6NEE1 506 aa30.96■■■□□ 2.55
NEK6-214ENST00000545174 EIF4G2P78344 907 aaKnown RBP eCLIP30.94■■■□□ 2.548e-7■■■■■ 28.7
NEK6-214ENST00000545174 ATP10BO94823 1461 aa30.92■■■□□ 2.54
NEK6-214ENST00000545174 C11orf95C9JLR9 678 aaPredicted RBP30.92■■■□□ 2.54
NEK6-214ENST00000545174 RPRD2Q5VT52 1461 aaKnown RBP30.91■■■□□ 2.54
NEK6-214ENST00000545174 PZPP20742 1482 aa30.89■■■□□ 2.53
NEK6-214ENST00000545174 ABCA8O94911 1581 aa30.88■■■□□ 2.53
NEK6-214ENST00000545174 ADCY10Q96PN6 1610 aa30.86■■■□□ 2.53
NEK6-214ENST00000545174 ITSN2Q9NZM3 1697 aa30.86■■■□□ 2.53
NEK6-214ENST00000545174 TEX14Q8IWB6 1497 aa30.85■■■□□ 2.53
NEK6-214ENST00000545174 ABCC10Q5T3U5 1492 aa30.8■■■□□ 2.52
NEK6-214ENST00000545174 PKD2Q13563 968 aa30.8■■■□□ 2.52
NEK6-214ENST00000545174 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
NEK6-214ENST00000545174 HNRNPMP52272 730 aaKnown RBP eCLIP30.79■■■□□ 2.524e-7■■■■□ 19.9
NEK6-214ENST00000545174 PTPRGP23470 1445 aa30.78■■■□□ 2.52
NEK6-214ENST00000545174 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
NEK6-214ENST00000545174 CDC42BPAQ5VT25 1732 aa30.77■■■□□ 2.52
NEK6-214ENST00000545174 BCANQ96GW7 911 aa30.76■■■□□ 2.52
NEK6-214ENST00000545174 ANKRD50Q9ULJ7 1429 aa30.75■■■□□ 2.51
NEK6-214ENST00000545174 ADGBQ8N7X0 1667 aa30.74■■■□□ 2.51
NEK6-214ENST00000545174 CROCC2H7BZ55 1655 aa30.73■■■□□ 2.51
NEK6-214ENST00000545174 FKBP8Q14318 412 aa30.72■■■□□ 2.51
NEK6-214ENST00000545174 ZNF326Q5BKZ1 582 aaKnown RBP30.72■■■□□ 2.51
NEK6-214ENST00000545174 KIAA1107Q9UPP5 1409 aa30.71■■■□□ 2.51
NEK6-214ENST00000545174 CCDC184Q52MB2 194 aa30.71■■■□□ 2.51
NEK6-214ENST00000545174 CCDC7Q96M83 1385 aa30.71■■■□□ 2.51
NEK6-214ENST00000545174 C9orf84Q5VXU9 1444 aa30.7■■■□□ 2.51
NEK6-214ENST00000545174 TSPY4P0CV99 314 aa30.68■■■□□ 2.5
NEK6-214ENST00000545174 TSPY10P0CW01 314 aa30.68■■■□□ 2.5
NEK6-214ENST00000545174 NUP155O75694 1391 aa30.68■■■□□ 2.5
NEK6-214ENST00000545174 SPATA31E1Q6ZUB1 1445 aa30.66■■■□□ 2.5
NEK6-214ENST00000545174 CNTLNQ9NXG0 1405 aa30.65■■■□□ 2.5
NEK6-214ENST00000545174 KIF7Q2M1P5 1343 aa30.64■■■□□ 2.49
NEK6-214ENST00000545174 HNRNPUQ00839 825 aaKnown RBP eCLIP30.62■■■□□ 2.49
NEK6-214ENST00000545174 CHD1O14646 1710 aa30.6■■■□□ 2.49
NEK6-214ENST00000545174 MBD5Q9P267 1494 aa30.59■■■□□ 2.49
NEK6-214ENST00000545174 KIF15Q9NS87 1388 aa30.58■■■□□ 2.49
NEK6-214ENST00000545174 PRKRIP1Q9H875 184 aaPredicted RBP30.57■■■□□ 2.48
NEK6-214ENST00000545174 SHANK2Q9UPX8 1470 aa30.56■■■□□ 2.48
NEK6-214ENST00000545174 ERCC6L2Q5T890 1561 aa30.55■■■□□ 2.48
NEK6-214ENST00000545174 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
NEK6-214ENST00000545174 POLR3GLQ9BT43 218 aa30.52■■■□□ 2.48
NEK6-214ENST00000545174 SAMD9LQ8IVG5 1584 aa30.51■■■□□ 2.47
NEK6-214ENST00000545174 KDM2AQ9Y2K7 1162 aa30.51■■■□□ 2.47
NEK6-214ENST00000545174 CDC42BPBQ9Y5S2 1711 aa30.5■■■□□ 2.47
NEK6-214ENST00000545174 USP47Q96K76 1375 aa30.48■■■□□ 2.47
NEK6-214ENST00000545174 FAM9BQ8IZU0 186 aa30.47■■■□□ 2.47
NEK6-214ENST00000545174 NEFLP07196 543 aa30.45■■■□□ 2.47
NEK6-214ENST00000545174 TSHZ2Q9NRE2 1034 aa30.45■■■□□ 2.47
NEK6-214ENST00000545174 CCDC141Q6ZP82 1450 aa30.44■■■□□ 2.46
NEK6-214ENST00000545174 ARHGEF5Q12774 1597 aa30.44■■■□□ 2.46
NEK6-214ENST00000545174 MRS2Q9HD23 443 aa30.44■■■□□ 2.46
NEK6-214ENST00000545174 TTC37Q6PGP7 1564 aa30.42■■■□□ 2.46
NEK6-214ENST00000545174 DCAF11Q8TEB1 546 aa30.41■■■□□ 2.46
NEK6-214ENST00000545174 PREX2Q70Z35 1606 aa30.41■■■□□ 2.46
NEK6-214ENST00000545174 BCORL1Q5H9F3 1711 aa30.41■■■□□ 2.46
NEK6-214ENST00000545174 SYCP2Q9BX26 1530 aa30.4■■■□□ 2.46
NEK6-214ENST00000545174 SHROOM2Q13796 1616 aa30.39■■■□□ 2.46
NEK6-214ENST00000545174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.39■■■□□ 2.462e-8■□□□□ 10.5
NEK6-214ENST00000545174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.39■■■□□ 2.468e-6■■■■□ 23.7
NEK6-214ENST00000545174 ARHGAP5Q13017 1502 aa30.38■■■□□ 2.45
NEK6-214ENST00000545174 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
NEK6-214ENST00000545174 CARD11Q9BXL7 1154 aa30.37■■■□□ 2.45
NEK6-214ENST00000545174 IRX6P78412 446 aaPredicted RBP30.35■■■□□ 2.45
NEK6-214ENST00000545174 RSPH4AQ5TD94 716 aa30.35■■■□□ 2.45
NEK6-214ENST00000545174 UHRF1BP1Q6BDS2 1440 aa30.33■■■□□ 2.45
NEK6-214ENST00000545174 DHX29Q7Z478 1369 aaKnown RBP30.32■■■□□ 2.44
NEK6-214ENST00000545174 FAM135AQ9P2D6 1515 aa30.32■■■□□ 2.44
NEK6-214ENST00000545174 KDM5CP41229 1560 aa30.32■■■□□ 2.44
NEK6-214ENST00000545174 ABCC2Q92887 1545 aa30.31■■■□□ 2.44
NEK6-214ENST00000545174 POLR1AO95602 1720 aaPredicted RBP30.31■■■□□ 2.44
NEK6-214ENST00000545174 RGL3Q3MIN7 710 aa30.3■■■□□ 2.44
NEK6-214ENST00000545174 ST20-MTHFSA0A0A6YYL1 179 aa30.3■■■□□ 2.44
NEK6-214ENST00000545174 RALGAPBQ86X10 1494 aa30.29■■■□□ 2.44
NEK6-214ENST00000545174 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
NEK6-214ENST00000545174 PLEKHH2Q8IVE3 1493 aa30.25■■■□□ 2.43
NEK6-214ENST00000545174 PLA2R1Q13018 1463 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms