RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
ACTN1-206ENST00000544964 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
ACTN1-206ENST00000544964 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
ACTN1-206ENST00000544964 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-206ENST00000544964 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-206ENST00000544964 KDM5CP41229 1560 aa20.34■□□□□ 0.85
ACTN1-206ENST00000544964 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
ACTN1-206ENST00000544964 ILDR1Q86SU0 546 aaPredicted RBP20.34■□□□□ 0.85
ACTN1-206ENST00000544964 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
ACTN1-206ENST00000544964 PREX2Q70Z35 1606 aa20.33■□□□□ 0.84
ACTN1-206ENST00000544964 CLIP1P30622 1438 aa20.33■□□□□ 0.84
ACTN1-206ENST00000544964 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
ACTN1-206ENST00000544964 FER1L4A9Z1Z3 1794 aa20.33■□□□□ 0.84
ACTN1-206ENST00000544964 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
ACTN1-206ENST00000544964 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
ACTN1-206ENST00000544964 CDK11AQ9UQ88 783 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-206ENST00000544964 ZNF518AQ6AHZ1 1483 aa20.3■□□□□ 0.84
ACTN1-206ENST00000544964 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
ACTN1-206ENST00000544964 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
ACTN1-206ENST00000544964 C9orf84Q5VXU9 1444 aa20.28■□□□□ 0.84
ACTN1-206ENST00000544964 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
ACTN1-206ENST00000544964 ATP10AO60312 1499 aa20.27■□□□□ 0.84
ACTN1-206ENST00000544964 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.83
ACTN1-206ENST00000544964 ABCC1P33527 1531 aa20.27■□□□□ 0.83
ACTN1-206ENST00000544964 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
ACTN1-206ENST00000544964 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
ACTN1-206ENST00000544964 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
ACTN1-206ENST00000544964 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
ACTN1-206ENST00000544964 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
ACTN1-206ENST00000544964 MLECQ14165 292 aa20.18■□□□□ 0.82
ACTN1-206ENST00000544964 AFAP1Q8N556 730 aa20.18■□□□□ 0.82
ACTN1-206ENST00000544964 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
ACTN1-206ENST00000544964 SAMD9LQ8IVG5 1584 aa20.17■□□□□ 0.82
ACTN1-206ENST00000544964 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
ACTN1-206ENST00000544964 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
ACTN1-206ENST00000544964 AGLP35573 1532 aa20.12■□□□□ 0.81
ACTN1-206ENST00000544964 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
ACTN1-206ENST00000544964 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
ACTN1-206ENST00000544964 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
ACTN1-206ENST00000544964 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
ACTN1-206ENST00000544964 HSPA2P54652 639 aa20.11■□□□□ 0.81
ACTN1-206ENST00000544964 C3P01024 1663 aa20.09■□□□□ 0.81
ACTN1-206ENST00000544964 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-206ENST00000544964 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
ACTN1-206ENST00000544964 CEBPAP49715 358 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-206ENST00000544964 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
ACTN1-206ENST00000544964 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
ACTN1-206ENST00000544964 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
ACTN1-206ENST00000544964 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
ACTN1-206ENST00000544964 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.8
ACTN1-206ENST00000544964 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
ACTN1-206ENST00000544964 STRCQ7RTU9 1775 aa20.02■□□□□ 0.8
ACTN1-206ENST00000544964 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
ACTN1-206ENST00000544964 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.79
ACTN1-206ENST00000544964 PLEKHH2Q8IVE3 1493 aa20■□□□□ 0.79
ACTN1-206ENST00000544964 MROH2AA6NES4 1674 aa20■□□□□ 0.79
ACTN1-206ENST00000544964 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
ACTN1-206ENST00000544964 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
ACTN1-206ENST00000544964 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
ACTN1-206ENST00000544964 CCNB3Q8WWL7 1395 aa19.98■□□□□ 0.79
ACTN1-206ENST00000544964 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-206ENST00000544964 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.78
ACTN1-206ENST00000544964 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.78
ACTN1-206ENST00000544964 SPAG9O60271 1321 aaKnown RBP19.95■□□□□ 0.78
ACTN1-206ENST00000544964 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
ACTN1-206ENST00000544964 ADGBQ8N7X0 1667 aa19.94■□□□□ 0.78
ACTN1-206ENST00000544964 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
ACTN1-206ENST00000544964 A2MP01023 1474 aa19.92■□□□□ 0.78
ACTN1-206ENST00000544964 CLTCQ00610 1675 aaKnown RBP19.91■□□□□ 0.78
ACTN1-206ENST00000544964 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.77
ACTN1-206ENST00000544964 NPATQ14207 1427 aa19.88■□□□□ 0.77
ACTN1-206ENST00000544964 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
ACTN1-206ENST00000544964 ZNF142P52746 1687 aaPredicted RBP19.87■□□□□ 0.77
ACTN1-206ENST00000544964 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
ACTN1-206ENST00000544964 ESF1Q9H501 851 aaKnown RBP19.85■□□□□ 0.77
ACTN1-206ENST00000544964 CAMSAP2Q08AD1 1489 aa19.85■□□□□ 0.77
ACTN1-206ENST00000544964 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
ACTN1-206ENST00000544964 CERKQ8TCT0 537 aa19.84■□□□□ 0.77
ACTN1-206ENST00000544964 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
ACTN1-206ENST00000544964 RTEL1-TNFRSF6BF6WH68 1400 aa19.83■□□□□ 0.76
ACTN1-206ENST00000544964 CCDC141Q6ZP82 1450 aa19.82■□□□□ 0.76
ACTN1-206ENST00000544964 PTPRTO14522 1441 aa19.82■□□□□ 0.76
ACTN1-206ENST00000544964 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
ACTN1-206ENST00000544964 CAMSAP1Q5T5Y3 1602 aa19.8■□□□□ 0.76
ACTN1-206ENST00000544964 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
ACTN1-206ENST00000544964 ARHGEF5Q12774 1597 aa19.78■□□□□ 0.76
ACTN1-206ENST00000544964 CEP170BQ9Y4F5 1589 aaPredicted RBP19.78■□□□□ 0.76
ACTN1-206ENST00000544964 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
ACTN1-206ENST00000544964 LTBP4Q8N2S1 1624 aa19.77■□□□□ 0.76
ACTN1-206ENST00000544964 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.76
ACTN1-206ENST00000544964 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
ACTN1-206ENST00000544964 GGT6Q6P531 493 aa19.74■□□□□ 0.75
ACTN1-206ENST00000544964 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
ACTN1-206ENST00000544964 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
ACTN1-206ENST00000544964 PLA2R1Q13018 1463 aa19.73■□□□□ 0.75
ACTN1-206ENST00000544964 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
ACTN1-206ENST00000544964 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
ACTN1-206ENST00000544964 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
ACTN1-206ENST00000544964 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
ACTN1-206ENST00000544964 RNF17Q9BXT8 1623 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms