RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
CDCA3-209ENST00000544610 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
CDCA3-209ENST00000544610 BCORL1Q5H9F3 1711 aa10.8□□□□□ -0.68
CDCA3-209ENST00000544610 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
CDCA3-209ENST00000544610 CAPN15O75808 1086 aa10.78□□□□□ -0.68
CDCA3-209ENST00000544610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDCA3-209ENST00000544610 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
CDCA3-209ENST00000544610 MADDQ8WXG6 1647 aa10.77□□□□□ -0.68
CDCA3-209ENST00000544610 FANCAO15360 1455 aa10.77□□□□□ -0.69
CDCA3-209ENST00000544610 DENND4BO75064 1496 aaPredicted RBP10.77□□□□□ -0.69
CDCA3-209ENST00000544610 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
CDCA3-209ENST00000544610 AKNAQ7Z591 1439 aa10.76□□□□□ -0.69
CDCA3-209ENST00000544610 ZMYM4Q5VZL5 1548 aa10.76□□□□□ -0.69
CDCA3-209ENST00000544610 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
CDCA3-209ENST00000544610 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-209ENST00000544610 PCF11O94913 1555 aaKnown RBP10.75□□□□□ -0.69
CDCA3-209ENST00000544610 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
CDCA3-209ENST00000544610 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
CDCA3-209ENST00000544610 ARID4BQ4LE39 1312 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-209ENST00000544610 MAGI2Q86UL8 1455 aa10.72□□□□□ -0.69
CDCA3-209ENST00000544610 ZFYVE16Q7Z3T8 1539 aa10.72□□□□□ -0.69
CDCA3-209ENST00000544610 RIMS1Q86UR5 1692 aaKnown RBP10.72□□□□□ -0.69
CDCA3-209ENST00000544610 SIGLEC1Q9BZZ2 1709 aa10.71□□□□□ -0.69
CDCA3-209ENST00000544610 YEATS2Q9ULM3 1422 aa10.71□□□□□ -0.69
CDCA3-209ENST00000544610 PLCH2O75038 1416 aa10.7□□□□□ -0.7
CDCA3-209ENST00000544610 POGZQ7Z3K3 1410 aa10.7□□□□□ -0.7
CDCA3-209ENST00000544610 HECW1Q76N89 1606 aa10.69□□□□□ -0.7
CDCA3-209ENST00000544610 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
CDCA3-209ENST00000544610 FBXO41Q8TF61 875 aa10.69□□□□□ -0.7
CDCA3-209ENST00000544610 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
CDCA3-209ENST00000544610 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
CDCA3-209ENST00000544610 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
CDCA3-209ENST00000544610 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
CDCA3-209ENST00000544610 MYO5CQ9NQX4 1742 aa10.66□□□□□ -0.7
CDCA3-209ENST00000544610 KIF14Q15058 1648 aa10.66□□□□□ -0.7
CDCA3-209ENST00000544610 ARHGEF12Q9NZN5 1544 aa10.65□□□□□ -0.7
CDCA3-209ENST00000544610 ZBTB22O15209 634 aa10.65□□□□□ -0.7
CDCA3-209ENST00000544610 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
CDCA3-209ENST00000544610 ATP10AO60312 1499 aa10.64□□□□□ -0.71
CDCA3-209ENST00000544610 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-209ENST00000544610 C9orf84Q5VXU9 1444 aa10.64□□□□□ -0.71
CDCA3-209ENST00000544610 ZNF518AQ6AHZ1 1483 aa10.63□□□□□ -0.71
CDCA3-209ENST00000544610 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
CDCA3-209ENST00000544610 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
CDCA3-209ENST00000544610 CDK11AQ9UQ88 783 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-209ENST00000544610 KDM5CP41229 1560 aa10.63□□□□□ -0.71
CDCA3-209ENST00000544610 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
CDCA3-209ENST00000544610 CLIP1P30622 1438 aa10.61□□□□□ -0.71
CDCA3-209ENST00000544610 HSPA2P54652 639 aa10.61□□□□□ -0.71
CDCA3-209ENST00000544610 MLECQ14165 292 aa10.61□□□□□ -0.71
CDCA3-209ENST00000544610 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
CDCA3-209ENST00000544610 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
CDCA3-209ENST00000544610 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
CDCA3-209ENST00000544610 PREX1Q8TCU6 1659 aa10.6□□□□□ -0.71
CDCA3-209ENST00000544610 DIP2CQ9Y2E4 1556 aa10.59□□□□□ -0.71
CDCA3-209ENST00000544610 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
CDCA3-209ENST00000544610 CCDC18Q5T9S5 1454 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 MLH3Q9UHC1 1453 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 AFAP1Q8N556 730 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 ABCA6Q8N139 1617 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 ABCC1P33527 1531 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
CDCA3-209ENST00000544610 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-209ENST00000544610 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
CDCA3-209ENST00000544610 AGLP35573 1532 aa10.54□□□□□ -0.72
CDCA3-209ENST00000544610 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
CDCA3-209ENST00000544610 CEBPAP49715 358 aaPredicted RBP10.54□□□□□ -0.72
CDCA3-209ENST00000544610 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
CDCA3-209ENST00000544610 UHRF1BP1Q6BDS2 1440 aa10.53□□□□□ -0.72
CDCA3-209ENST00000544610 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
CDCA3-209ENST00000544610 FYCO1Q9BQS8 1478 aa10.53□□□□□ -0.72
CDCA3-209ENST00000544610 C3P01024 1663 aa10.52□□□□□ -0.73
CDCA3-209ENST00000544610 CDC42BPAQ5VT25 1732 aa10.52□□□□□ -0.73
CDCA3-209ENST00000544610 STRCQ7RTU9 1775 aa10.52□□□□□ -0.73
CDCA3-209ENST00000544610 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
CDCA3-209ENST00000544610 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
CDCA3-209ENST00000544610 KIDINS220Q9ULH0 1771 aa10.51□□□□□ -0.73
CDCA3-209ENST00000544610 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
CDCA3-209ENST00000544610 CNTLNQ9NXG0 1405 aa10.49□□□□□ -0.73
CDCA3-209ENST00000544610 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
CDCA3-209ENST00000544610 PTPRTO14522 1441 aa10.48□□□□□ -0.73
CDCA3-209ENST00000544610 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
CDCA3-209ENST00000544610 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
CDCA3-209ENST00000544610 MROH2AA6NES4 1674 aa10.47□□□□□ -0.73
CDCA3-209ENST00000544610 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
CDCA3-209ENST00000544610 PLXNC1O60486 1568 aa10.46□□□□□ -0.74
CDCA3-209ENST00000544610 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
CDCA3-209ENST00000544610 NPATQ14207 1427 aa10.45□□□□□ -0.74
CDCA3-209ENST00000544610 NCOA1Q15788 1441 aa10.45□□□□□ -0.74
CDCA3-209ENST00000544610 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
CDCA3-209ENST00000544610 SETD1BQ9UPS6 1966 aaKnown RBP10.45□□□□□ -0.74
CDCA3-209ENST00000544610 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
CDCA3-209ENST00000544610 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
CDCA3-209ENST00000544610 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
CDCA3-209ENST00000544610 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
CDCA3-209ENST00000544610 LTBP4Q8N2S1 1624 aa10.43□□□□□ -0.74
CDCA3-209ENST00000544610 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
CDCA3-209ENST00000544610 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDCA3-209ENST00000544610 A2MP01023 1474 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms