RNA–Protein interactions for RNA: ENST00000544377.1

SLC3A2-221, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-221ENST00000544377 CDC42BPAQ5VT25 1732 aa26.59■■□□□ 1.85
SLC3A2-221ENST00000544377 PREX2Q70Z35 1606 aa26.59■■□□□ 1.85
SLC3A2-221ENST00000544377 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
SLC3A2-221ENST00000544377 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
SLC3A2-221ENST00000544377 ARHGEF40Q8TER5 1519 aa26.53■■□□□ 1.84
SLC3A2-221ENST00000544377 POGZQ7Z3K3 1410 aa26.51■■□□□ 1.83
SLC3A2-221ENST00000544377 ARID4BQ4LE39 1312 aaPredicted RBP26.51■■□□□ 1.83
SLC3A2-221ENST00000544377 ZMYM4Q5VZL5 1548 aa26.5■■□□□ 1.83
SLC3A2-221ENST00000544377 ZFYVE16Q7Z3T8 1539 aa26.5■■□□□ 1.83
SLC3A2-221ENST00000544377 MYT1LQ9UL68 1186 aa26.47■■□□□ 1.83
SLC3A2-221ENST00000544377 ZNF777Q9ULD5 760 aaPredicted RBP26.47■■□□□ 1.83
SLC3A2-221ENST00000544377 EHBP1L1Q8N3D4 1523 aa26.47■■□□□ 1.83
SLC3A2-221ENST00000544377 ITSN2Q9NZM3 1697 aa26.46■■□□□ 1.83
SLC3A2-221ENST00000544377 VPS8Q8N3P4 1428 aa26.46■■□□□ 1.83
SLC3A2-221ENST00000544377 YEATS2Q9ULM3 1422 aa26.45■■□□□ 1.82
SLC3A2-221ENST00000544377 ABCC1P33527 1531 aa26.43■■□□□ 1.82
SLC3A2-221ENST00000544377 CCNB3Q8WWL7 1395 aa26.43■■□□□ 1.82
SLC3A2-221ENST00000544377 ZNF518AQ6AHZ1 1483 aa26.42■■□□□ 1.82
SLC3A2-221ENST00000544377 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
SLC3A2-221ENST00000544377 MAGI2Q86UL8 1455 aa26.42■■□□□ 1.82
SLC3A2-221ENST00000544377 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
SLC3A2-221ENST00000544377 GPATCH8Q9UKJ3 1502 aaKnown RBP26.41■■□□□ 1.82
SLC3A2-221ENST00000544377 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
SLC3A2-221ENST00000544377 SAMD9LQ8IVG5 1584 aa26.4■■□□□ 1.82
SLC3A2-221ENST00000544377 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.81
SLC3A2-221ENST00000544377 SIGLEC1Q9BZZ2 1709 aa26.39■■□□□ 1.81
SLC3A2-221ENST00000544377 HECW2Q9P2P5 1572 aa26.38■■□□□ 1.81
SLC3A2-221ENST00000544377 ADAMTSL3P82987 1691 aa26.38■■□□□ 1.81
SLC3A2-221ENST00000544377 ARHGEF12Q9NZN5 1544 aa26.37■■□□□ 1.81
SLC3A2-221ENST00000544377 KDM5CP41229 1560 aa26.37■■□□□ 1.81
SLC3A2-221ENST00000544377 CFDP1Q9UEE9 299 aaPredicted RBP26.36■■□□□ 1.81
SLC3A2-221ENST00000544377 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
SLC3A2-221ENST00000544377 MADDQ8WXG6 1647 aa26.35■■□□□ 1.81
SLC3A2-221ENST00000544377 SYCP2Q9BX26 1530 aa26.34■■□□□ 1.81
SLC3A2-221ENST00000544377 RIMS1Q86UR5 1692 aaKnown RBP26.32■■□□□ 1.8
SLC3A2-221ENST00000544377 MLECQ14165 292 aa26.32■■□□□ 1.8
SLC3A2-221ENST00000544377 ATP10AO60312 1499 aa26.31■■□□□ 1.8
SLC3A2-221ENST00000544377 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
SLC3A2-221ENST00000544377 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
SLC3A2-221ENST00000544377 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
SLC3A2-221ENST00000544377 NCOA2Q15596 1464 aa26.29■■□□□ 1.8
SLC3A2-221ENST00000544377 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
SLC3A2-221ENST00000544377 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
SLC3A2-221ENST00000544377 FER1L4A9Z1Z3 1794 aa26.26■■□□□ 1.79
SLC3A2-221ENST00000544377 LRRC9Q6ZRR7 1453 aa26.26■■□□□ 1.79
SLC3A2-221ENST00000544377 PLEKHH2Q8IVE3 1493 aa26.25■■□□□ 1.79
SLC3A2-221ENST00000544377 PLPPR3Q6T4P5 718 aa26.25■■□□□ 1.79
SLC3A2-221ENST00000544377 PTPRMP28827 1452 aa26.24■■□□□ 1.79
SLC3A2-221ENST00000544377 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
SLC3A2-221ENST00000544377 APLP2Q06481 763 aa26.24■■□□□ 1.79
SLC3A2-221ENST00000544377 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
SLC3A2-221ENST00000544377 MAP3K1Q13233 1512 aa26.2■■□□□ 1.79
SLC3A2-221ENST00000544377 KANK4Q5T7N3 995 aaPredicted RBP26.2■■□□□ 1.78
SLC3A2-221ENST00000544377 SPAG9O60271 1321 aaKnown RBP26.19■■□□□ 1.78
SLC3A2-221ENST00000544377 KIAA1107Q9UPP5 1409 aa26.19■■□□□ 1.78
SLC3A2-221ENST00000544377 ATP7AQ04656 1500 aa26.16■■□□□ 1.78
SLC3A2-221ENST00000544377 CAMSAP2Q08AD1 1489 aa26.15■■□□□ 1.78
SLC3A2-221ENST00000544377 REREQ9P2R6 1566 aa26.15■■□□□ 1.78
SLC3A2-221ENST00000544377 INO80Q9ULG1 1556 aaPredicted RBP26.15■■□□□ 1.78
SLC3A2-221ENST00000544377 MBD5Q9P267 1494 aa26.09■■□□□ 1.77
SLC3A2-221ENST00000544377 ADGBQ8N7X0 1667 aa26.07■■□□□ 1.76
SLC3A2-221ENST00000544377 AGLP35573 1532 aa26.06■■□□□ 1.76
SLC3A2-221ENST00000544377 CCDC141Q6ZP82 1450 aa26.05■■□□□ 1.76
SLC3A2-221ENST00000544377 ESF1Q9H501 851 aaKnown RBP26.04■■□□□ 1.76
SLC3A2-221ENST00000544377 MYOM3Q5VTT5 1437 aa26.04■■□□□ 1.76
SLC3A2-221ENST00000544377 A2MP01023 1474 aa26.03■■□□□ 1.76
SLC3A2-221ENST00000544377 ARHGEF5Q12774 1597 aa26■■□□□ 1.75
SLC3A2-221ENST00000544377 CEBPAP49715 358 aaPredicted RBP25.99■■□□□ 1.75
SLC3A2-221ENST00000544377 PLXNC1O60486 1568 aa25.98■■□□□ 1.75
SLC3A2-221ENST00000544377 C3P01024 1663 aa25.97■■□□□ 1.75
SLC3A2-221ENST00000544377 RSPH4AQ5TD94 716 aa25.97■■□□□ 1.75
SLC3A2-221ENST00000544377 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
SLC3A2-221ENST00000544377 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
SLC3A2-221ENST00000544377 TSPY4P0CV99 314 aa25.96■■□□□ 1.75
SLC3A2-221ENST00000544377 TSPY10P0CW01 314 aa25.96■■□□□ 1.75
SLC3A2-221ENST00000544377 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
SLC3A2-221ENST00000544377 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
SLC3A2-221ENST00000544377 GGT6Q6P531 493 aa25.93■■□□□ 1.74
SLC3A2-221ENST00000544377 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
SLC3A2-221ENST00000544377 PREX1Q8TCU6 1659 aa25.91■■□□□ 1.74
SLC3A2-221ENST00000544377 MROH2AA6NES4 1674 aa25.88■■□□□ 1.73
SLC3A2-221ENST00000544377 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
SLC3A2-221ENST00000544377 MAST1Q9Y2H9 1570 aa25.87■■□□□ 1.73
SLC3A2-221ENST00000544377 DHX29Q7Z478 1369 aaKnown RBP25.87■■□□□ 1.73
SLC3A2-221ENST00000544377 CROCC2H7BZ55 1655 aa25.87■■□□□ 1.73
SLC3A2-221ENST00000544377 HSPA2P54652 639 aa25.86■■□□□ 1.73
SLC3A2-221ENST00000544377 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
SLC3A2-221ENST00000544377 KIF3BO15066 747 aa25.84■■□□□ 1.73
SLC3A2-221ENST00000544377 SETD1BQ9UPS6 1966 aaKnown RBP25.83■■□□□ 1.73
SLC3A2-221ENST00000544377 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
SLC3A2-221ENST00000544377 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
SLC3A2-221ENST00000544377 ZMYM3Q14202 1370 aa25.79■■□□□ 1.72
SLC3A2-221ENST00000544377 UHRF1BP1Q6BDS2 1440 aa25.79■■□□□ 1.72
SLC3A2-221ENST00000544377 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
SLC3A2-221ENST00000544377 FAM50AQ14320 339 aaKnown RBP25.77■■□□□ 1.72
SLC3A2-221ENST00000544377 ABCC5O15440 1437 aa25.77■■□□□ 1.72
SLC3A2-221ENST00000544377 DAPK1P53355 1430 aa25.77■■□□□ 1.72
SLC3A2-221ENST00000544377 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
SLC3A2-221ENST00000544377 CHIC2Q9UKJ5 165 aa25.72■■□□□ 1.71
SLC3A2-221ENST00000544377 PPP6R1Q9UPN7 881 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms