RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 SCAPERQ9BY12 1400 aa30.76■■■□□ 2.51
RAP1B-229ENST00000543393 CDK13Q14004 1512 aaKnown RBP30.76■■■□□ 2.51
RAP1B-229ENST00000543393 PLCH2O75038 1416 aa30.73■■■□□ 2.51
RAP1B-229ENST00000543393 ARHGEF12Q9NZN5 1544 aa30.69■■■□□ 2.5
RAP1B-229ENST00000543393 ATP10AO60312 1499 aa30.69■■■□□ 2.5
RAP1B-229ENST00000543393 C9orf84Q5VXU9 1444 aa30.66■■■□□ 2.5
RAP1B-229ENST00000543393 PREX1Q8TCU6 1659 aa30.66■■■□□ 2.5
RAP1B-229ENST00000543393 MYO5CQ9NQX4 1742 aa30.62■■■□□ 2.49
RAP1B-229ENST00000543393 CEBPAP49715 358 aaPredicted RBP30.62■■■□□ 2.49
RAP1B-229ENST00000543393 EFCAB2Q5VUJ9 269 aa30.61■■■□□ 2.49
RAP1B-229ENST00000543393 ATP1B4Q9UN42 357 aaPredicted RBP30.58■■■□□ 2.49
RAP1B-229ENST00000543393 STRCQ7RTU9 1775 aa30.55■■■□□ 2.48
RAP1B-229ENST00000543393 ZNF518AQ6AHZ1 1483 aa30.53■■■□□ 2.48
RAP1B-229ENST00000543393 KIF14Q15058 1648 aa30.53■■■□□ 2.48
RAP1B-229ENST00000543393 DMRT2Q9Y5R5 561 aa30.52■■■□□ 2.48
RAP1B-229ENST00000543393 FMN1Q68DA7 1419 aa30.52■■■□□ 2.48
RAP1B-229ENST00000543393 CDK11AQ9UQ88 783 aaPredicted RBP30.51■■■□□ 2.47
RAP1B-229ENST00000543393 AFAP1Q8N556 730 aa30.5■■■□□ 2.47
RAP1B-229ENST00000543393 KDM5CP41229 1560 aa30.49■■■□□ 2.47
RAP1B-229ENST00000543393 UHRF1BP1Q6BDS2 1440 aa30.49■■■□□ 2.47
RAP1B-229ENST00000543393 SETD1BQ9UPS6 1966 aaKnown RBP30.49■■■□□ 2.47
RAP1B-229ENST00000543393 ARHGAP5Q13017 1502 aa30.48■■■□□ 2.47
RAP1B-229ENST00000543393 DISP3Q9P2K9 1392 aa30.46■■■□□ 2.47
RAP1B-229ENST00000543393 MYT1LQ9UL68 1186 aa30.45■■■□□ 2.47
RAP1B-229ENST00000543393 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.46
RAP1B-229ENST00000543393 EHMT2Q96KQ7 1210 aa30.44■■■□□ 2.46
RAP1B-229ENST00000543393 TROQ12816 1431 aaPredicted RBP30.44■■■□□ 2.46
RAP1B-229ENST00000543393 ARHGAP35Q9NRY4 1499 aa30.44■■■□□ 2.46
RAP1B-229ENST00000543393 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
RAP1B-229ENST00000543393 ILDR2Q71H61 639 aa30.43■■■□□ 2.46
RAP1B-229ENST00000543393 REREQ9P2R6 1566 aa30.41■■■□□ 2.46
RAP1B-229ENST00000543393 C3P01024 1663 aa30.39■■■□□ 2.46
RAP1B-229ENST00000543393 ABCA6Q8N139 1617 aa30.39■■■□□ 2.46
RAP1B-229ENST00000543393 CLIP1P30622 1438 aa30.39■■■□□ 2.45
RAP1B-229ENST00000543393 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
RAP1B-229ENST00000543393 LRRIQ1Q96JM4 1722 aa30.36■■■□□ 2.45
RAP1B-229ENST00000543393 MLH3Q9UHC1 1453 aa30.36■■■□□ 2.45
RAP1B-229ENST00000543393 PTPRTO14522 1441 aa30.35■■■□□ 2.45
RAP1B-229ENST00000543393 SOCS7O14512 581 aa30.32■■■□□ 2.44
RAP1B-229ENST00000543393 AGLP35573 1532 aa30.32■■■□□ 2.44
RAP1B-229ENST00000543393 ESF1Q9H501 851 aaKnown RBP30.31■■■□□ 2.44
RAP1B-229ENST00000543393 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
RAP1B-229ENST00000543393 ABCC1P33527 1531 aa30.28■■■□□ 2.44
RAP1B-229ENST00000543393 PREX2Q70Z35 1606 aa30.28■■■□□ 2.44
RAP1B-229ENST00000543393 LTBP4Q8N2S1 1624 aa30.26■■■□□ 2.44
RAP1B-229ENST00000543393 ITSN2Q9NZM3 1697 aa30.26■■■□□ 2.43
RAP1B-229ENST00000543393 SPATA31D1Q6ZQQ2 1576 aa30.24■■■□□ 2.43
RAP1B-229ENST00000543393 KIDINS220Q9ULH0 1771 aa30.23■■■□□ 2.43
RAP1B-229ENST00000543393 NCOA1Q15788 1441 aa30.22■■■□□ 2.43
RAP1B-229ENST00000543393 CNTLNQ9NXG0 1405 aa30.21■■■□□ 2.43
RAP1B-229ENST00000543393 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
RAP1B-229ENST00000543393 CCDC18Q5T9S5 1454 aa30.16■■■□□ 2.42
RAP1B-229ENST00000543393 CDC42BPAQ5VT25 1732 aa30.16■■■□□ 2.42
RAP1B-229ENST00000543393 CAMSAP1Q5T5Y3 1602 aa30.13■■■□□ 2.41
RAP1B-229ENST00000543393 CASKIN1Q8WXD9 1431 aa30.13■■■□□ 2.41
RAP1B-229ENST00000543393 MROH2AA6NES4 1674 aa30.12■■■□□ 2.41
RAP1B-229ENST00000543393 NPATQ14207 1427 aa30.12■■■□□ 2.41
RAP1B-229ENST00000543393 SAMD9LQ8IVG5 1584 aa30.11■■■□□ 2.41
RAP1B-229ENST00000543393 ZMYM3Q14202 1370 aa30.09■■■□□ 2.41
RAP1B-229ENST00000543393 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
RAP1B-229ENST00000543393 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
RAP1B-229ENST00000543393 NCKAP5LQ9HCH0 1330 aa30.04■■■□□ 2.4
RAP1B-229ENST00000543393 SYCP2Q9BX26 1530 aa30.04■■■□□ 2.4
RAP1B-229ENST00000543393 SPAG9O60271 1321 aaKnown RBP30.02■■■□□ 2.4
RAP1B-229ENST00000543393 ZNF335Q9H4Z2 1342 aaPredicted RBP30.01■■■□□ 2.4
RAP1B-229ENST00000543393 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
RAP1B-229ENST00000543393 CLTCQ00610 1675 aaKnown RBP30■■■□□ 2.39
RAP1B-229ENST00000543393 GPATCH8Q9UKJ3 1502 aaKnown RBP29.98■■■□□ 2.39
RAP1B-229ENST00000543393 MYO3AQ8NEV4 1616 aa29.98■■■□□ 2.39
RAP1B-229ENST00000543393 ZNF142P52746 1687 aaPredicted RBP29.98■■■□□ 2.39
RAP1B-229ENST00000543393 ATP7AQ04656 1500 aa29.97■■■□□ 2.39
RAP1B-229ENST00000543393 FYCO1Q9BQS8 1478 aa29.96■■■□□ 2.39
RAP1B-229ENST00000543393 UBAP1LF5GYI3 381 aa29.96■■■□□ 2.39
RAP1B-229ENST00000543393 PLXNC1O60486 1568 aa29.95■■■□□ 2.39
RAP1B-229ENST00000543393 PLA2R1Q13018 1463 aa29.95■■■□□ 2.39
RAP1B-229ENST00000543393 PKD2Q13563 968 aa29.94■■■□□ 2.38
RAP1B-229ENST00000543393 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
RAP1B-229ENST00000543393 PTPRKQ15262 1439 aa29.93■■■□□ 2.38
RAP1B-229ENST00000543393 INO80Q9ULG1 1556 aaPredicted RBP29.93■■■□□ 2.38
RAP1B-229ENST00000543393 CEP170BQ9Y4F5 1589 aaPredicted RBP29.93■■■□□ 2.38
RAP1B-229ENST00000543393 A2MP01023 1474 aa29.93■■■□□ 2.38
RAP1B-229ENST00000543393 KIAA1107Q9UPP5 1409 aa29.91■■■□□ 2.38
RAP1B-229ENST00000543393 TCOF1Q13428 1488 aaKnown RBP29.91■■■□□ 2.38
RAP1B-229ENST00000543393 GGT6Q6P531 493 aa29.9■■■□□ 2.38
RAP1B-229ENST00000543393 PLEKHH2Q8IVE3 1493 aa29.88■■■□□ 2.37
RAP1B-229ENST00000543393 CFDP1Q9UEE9 299 aaPredicted RBP29.88■■■□□ 2.37
RAP1B-229ENST00000543393 CCNB3Q8WWL7 1395 aa29.83■■■□□ 2.37
RAP1B-229ENST00000543393 PPP6R1Q9UPN7 881 aa29.83■■■□□ 2.37
RAP1B-229ENST00000543393 ADGBQ8N7X0 1667 aa29.81■■■□□ 2.36
RAP1B-229ENST00000543393 A2ML1A8K2U0 1454 aa29.77■■■□□ 2.36
RAP1B-229ENST00000543393 DNMT1P26358 1616 aaKnown RBP29.77■■■□□ 2.36
RAP1B-229ENST00000543393 ZNF644Q9H582 1327 aaPredicted RBP29.73■■■□□ 2.35
RAP1B-229ENST00000543393 MTUS2Q5JR59 1369 aa29.73■■■□□ 2.35
RAP1B-229ENST00000543393 SCAF1Q9H7N4 1312 aaKnown RBP29.71■■■□□ 2.35
RAP1B-229ENST00000543393 MBD5Q9P267 1494 aa29.69■■■□□ 2.34
RAP1B-229ENST00000543393 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
RAP1B-229ENST00000543393 HSPA1LP34931 641 aa29.69■■■□□ 2.34
RAP1B-229ENST00000543393 PIP4K2BP78356 416 aa29.68■■■□□ 2.34
RAP1B-229ENST00000543393 TIAM1Q13009 1591 aa29.68■■■□□ 2.34
RAP1B-229ENST00000543393 NEURL4Q96JN8 1562 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms