RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 FANCAO15360 1455 aa32.19■■■□□ 2.74
OTUB1-211ENST00000543004 ARAP3Q8WWN8 1544 aa32.18■■■□□ 2.74
OTUB1-211ENST00000543004 MYOM3Q5VTT5 1437 aa32.18■■■□□ 2.74
OTUB1-211ENST00000543004 CFDP1Q9UEE9 299 aaPredicted RBP32.16■■■□□ 2.74
OTUB1-211ENST00000543004 TEX14Q8IWB6 1497 aa32.15■■■□□ 2.74
OTUB1-211ENST00000543004 ZNF777Q9ULD5 760 aaPredicted RBP32.15■■■□□ 2.74
OTUB1-211ENST00000543004 EFCAB2Q5VUJ9 269 aa32.13■■■□□ 2.73
OTUB1-211ENST00000543004 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
OTUB1-211ENST00000543004 ZNF644Q9H582 1327 aaPredicted RBP32.12■■■□□ 2.73
OTUB1-211ENST00000543004 CFAP74Q9C0B2 1584 aa32.1■■■□□ 2.73
OTUB1-211ENST00000543004 AKNAQ7Z591 1439 aa32.09■■■□□ 2.73
OTUB1-211ENST00000543004 NEO1Q92859 1461 aa32.09■■■□□ 2.73
OTUB1-211ENST00000543004 FGD6Q6ZV73 1430 aa32.08■■■□□ 2.73
OTUB1-211ENST00000543004 MIA2Q96PC5 1412 aa32.05■■■□□ 2.72
OTUB1-211ENST00000543004 PTPN23Q9H3S7 1636 aa32.04■■■□□ 2.72
OTUB1-211ENST00000543004 ADGRL1O94910 1474 aa32.03■■■□□ 2.72
OTUB1-211ENST00000543004 CAMSAP2Q08AD1 1489 aa32.03■■■□□ 2.72
OTUB1-211ENST00000543004 ABCC1P33527 1531 aa32.02■■■□□ 2.72
OTUB1-211ENST00000543004 ARHGEF12Q9NZN5 1544 aa32.02■■■□□ 2.72
OTUB1-211ENST00000543004 COL17A1Q9UMD9 1497 aaPredicted RBP32.01■■■□□ 2.72
OTUB1-211ENST00000543004 SYCP2Q9BX26 1530 aa31.99■■■□□ 2.71
OTUB1-211ENST00000543004 SCAPERQ9BY12 1400 aa31.98■■■□□ 2.71
OTUB1-211ENST00000543004 HNRNPMP52272 730 aaKnown RBP eCLIP31.97■■■□□ 2.71
OTUB1-211ENST00000543004 TCOF1Q13428 1488 aaKnown RBP31.95■■■□□ 2.71
OTUB1-211ENST00000543004 KDM6BO15054 1643 aa31.94■■■□□ 2.7
OTUB1-211ENST00000543004 RAPGEF3O95398 923 aa31.93■■■□□ 2.7
OTUB1-211ENST00000543004 FAM50AQ14320 339 aaKnown RBP31.93■■■□□ 2.7
OTUB1-211ENST00000543004 RICTORQ6R327 1708 aa31.92■■■□□ 2.7
OTUB1-211ENST00000543004 RRBP1Q9P2E9 1410 aaKnown RBP31.91■■■□□ 2.7
OTUB1-211ENST00000543004 TRAPPC8Q9Y2L5 1435 aa31.91■■■□□ 2.7
OTUB1-211ENST00000543004 PLEKHH2Q8IVE3 1493 aa31.91■■■□□ 2.7
OTUB1-211ENST00000543004 MBD5Q9P267 1494 aa31.91■■■□□ 2.7
OTUB1-211ENST00000543004 KIAA1107Q9UPP5 1409 aa31.91■■■□□ 2.7
OTUB1-211ENST00000543004 FRMPD1Q5SYB0 1578 aa31.9■■■□□ 2.7
OTUB1-211ENST00000543004 DENND4BO75064 1496 aaPredicted RBP31.9■■■□□ 2.7
OTUB1-211ENST00000543004 AFAP1Q8N556 730 aa31.88■■■□□ 2.69
OTUB1-211ENST00000543004 POGZQ7Z3K3 1410 aa31.87■■■□□ 2.69
OTUB1-211ENST00000543004 ARHGEF5Q12774 1597 aa31.83■■■□□ 2.69
OTUB1-211ENST00000543004 ZNF518AQ6AHZ1 1483 aa31.81■■■□□ 2.68
OTUB1-211ENST00000543004 DNMT1P26358 1616 aaKnown RBP31.8■■■□□ 2.68
OTUB1-211ENST00000543004 CCDC141Q6ZP82 1450 aa31.79■■■□□ 2.68
OTUB1-211ENST00000543004 KDM5CP41229 1560 aa31.78■■■□□ 2.68
OTUB1-211ENST00000543004 ABCC5O15440 1437 aa31.77■■■□□ 2.68
OTUB1-211ENST00000543004 CROCC2H7BZ55 1655 aa31.76■■■□□ 2.68
OTUB1-211ENST00000543004 DAPK1P53355 1430 aa31.76■■■□□ 2.67
OTUB1-211ENST00000543004 ITGAEP38570 1179 aa31.75■■■□□ 2.67
OTUB1-211ENST00000543004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.75■■■□□ 2.674e-6■■■■■ 30.2
OTUB1-211ENST00000543004 PTPRKQ15262 1439 aa31.72■■■□□ 2.67
OTUB1-211ENST00000543004 ZMYM4Q5VZL5 1548 aa31.72■■■□□ 2.67
OTUB1-211ENST00000543004 RSPH4AQ5TD94 716 aa31.71■■■□□ 2.67
OTUB1-211ENST00000543004 KIDINS220Q9ULH0 1771 aa31.7■■■□□ 2.67
OTUB1-211ENST00000543004 HECW2Q9P2P5 1572 aa31.7■■■□□ 2.67
OTUB1-211ENST00000543004 SPAG9O60271 1321 aaKnown RBP31.7■■■□□ 2.66
OTUB1-211ENST00000543004 INO80Q9ULG1 1556 aaPredicted RBP31.69■■■□□ 2.66
OTUB1-211ENST00000543004 CHIC2Q9UKJ5 165 aa31.67■■■□□ 2.66
OTUB1-211ENST00000543004 MYT1LQ9UL68 1186 aa31.67■■■□□ 2.66
OTUB1-211ENST00000543004 ZFYVE16Q7Z3T8 1539 aa31.67■■■□□ 2.66
OTUB1-211ENST00000543004 TSPY4P0CV99 314 aa31.67■■■□□ 2.66
OTUB1-211ENST00000543004 TSPY10P0CW01 314 aa31.67■■■□□ 2.66
OTUB1-211ENST00000543004 C9orf84Q5VXU9 1444 aa31.66■■■□□ 2.66
OTUB1-211ENST00000543004 YEATS2Q9ULM3 1422 aa31.66■■■□□ 2.66
OTUB1-211ENST00000543004 MLH3Q9UHC1 1453 aa31.66■■■□□ 2.66
OTUB1-211ENST00000543004 ATP7AQ04656 1500 aa31.66■■■□□ 2.66
OTUB1-211ENST00000543004 MAST1Q9Y2H9 1570 aa31.64■■■□□ 2.66
OTUB1-211ENST00000543004 SHANK2Q9UPX8 1470 aa31.63■■■□□ 2.65
OTUB1-211ENST00000543004 ABCA6Q8N139 1617 aa31.62■■■□□ 2.65
OTUB1-211ENST00000543004 MAGI2Q86UL8 1455 aa31.59■■■□□ 2.65
OTUB1-211ENST00000543004 ADGBQ8N7X0 1667 aa31.59■■■□□ 2.65
OTUB1-211ENST00000543004 RTEL1-TNFRSF6BF6WH68 1400 aa31.58■■■□□ 2.65
OTUB1-211ENST00000543004 DIP2CQ9Y2E4 1556 aa31.58■■■□□ 2.65
OTUB1-211ENST00000543004 ARHGEF40Q8TER5 1519 aa31.57■■■□□ 2.64
OTUB1-211ENST00000543004 PLXNC1O60486 1568 aa31.52■■■□□ 2.64
OTUB1-211ENST00000543004 RRP7BPQ9NSQ0 103 aa31.52■■■□□ 2.64
OTUB1-211ENST00000543004 ADGRL2O95490 1459 aa31.52■■■□□ 2.64
OTUB1-211ENST00000543004 SIGLEC1Q9BZZ2 1709 aa31.51■■■□□ 2.64
OTUB1-211ENST00000543004 NCOA1Q15788 1441 aa31.51■■■□□ 2.63
OTUB1-211ENST00000543004 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
OTUB1-211ENST00000543004 ANKRD30AQ9BXX3 1397 aa31.48■■■□□ 2.63
OTUB1-211ENST00000543004 ATP10AO60312 1499 aa31.48■■■□□ 2.63
OTUB1-211ENST00000543004 KIF15Q9NS87 1388 aa31.47■■■□□ 2.63
OTUB1-211ENST00000543004 ROCK1Q13464 1354 aa31.44■■■□□ 2.62
OTUB1-211ENST00000543004 A2MP01023 1474 aa31.44■■■□□ 2.62
OTUB1-211ENST00000543004 DUOX2Q9NRD8 1548 aa31.39■■■□□ 2.62
OTUB1-211ENST00000543004 DHX29Q7Z478 1369 aaKnown RBP31.39■■■□□ 2.62
OTUB1-211ENST00000543004 REREQ9P2R6 1566 aa31.38■■■□□ 2.61
OTUB1-211ENST00000543004 NAIPQ13075 1403 aa31.36■■■□□ 2.61
OTUB1-211ENST00000543004 GCC2Q8IWJ2 1684 aa31.36■■■□□ 2.61
OTUB1-211ENST00000543004 HFM1A2PYH4 1435 aa31.32■■■□□ 2.61
OTUB1-211ENST00000543004 ANKRD50Q9ULJ7 1429 aa31.31■■■□□ 2.6
OTUB1-211ENST00000543004 ARID4BQ4LE39 1312 aaPredicted RBP31.3■■■□□ 2.6
OTUB1-211ENST00000543004 ERBINQ96RT1 1412 aa31.29■■■□□ 2.6
OTUB1-211ENST00000543004 AGLP35573 1532 aa31.28■■■□□ 2.6
OTUB1-211ENST00000543004 KIF3BO15066 747 aa31.27■■■□□ 2.6
OTUB1-211ENST00000543004 EIF2AK4Q9P2K8 1649 aaKnown RBP31.27■■■□□ 2.6
OTUB1-211ENST00000543004 PCGF6Q9BYE7 350 aa31.27■■■□□ 2.6
OTUB1-211ENST00000543004 MLECQ14165 292 aa31.25■■■□□ 2.59
OTUB1-211ENST00000543004 BCORL1Q5H9F3 1711 aa31.25■■■□□ 2.59
OTUB1-211ENST00000543004 SETD5Q9C0A6 1442 aa31.21■■■□□ 2.59
OTUB1-211ENST00000543004 GGT6Q6P531 493 aa31.2■■■□□ 2.59
OTUB1-211ENST00000543004 MROH1Q8NDA8 1641 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms